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Type

dac dataset documentation study

Repository

dbgap ega jga

Study type

affected sib pairs aggregate genomic data atac sequencing cancer genomics case set case-cohort case-control clinical cohort clinical diagnostic testing clinical genetic testing clinical trial cohort control set controlled trial copy number variation (cnv) cross-sectional epigenetics eqtl exome sequencing family forensic or paleo-genomics full transcriptome sequencing genotype genotype/expression gwas hi-c individual-level genomic data longitudinal longitudinal cohort marker discovery meta-analysis metagenomics metastasis methods development multi-omics data nested case-control nuclear families observational other parent-offspring parent-offspring trios partial factorial randomized population population genomics prospective randomized reference set repertoire sequencing (tumor vs. matched-normal) resequencing rna sequencing rnaseq sequencing single cell analysis single cell rna sequencing target capture sequencing target sequencing targeted capture sequence transcriptome analysis transcriptome sequencing transcriptome sequencing (tumor only) tumor tumor vs. matched-normal whole genome sequencing xenograft

Dataset types

amplicon sequencing chip-seq chromatin accessibility profiling by high-throughput sequencing exome sequencing genomic variant calling genotyping by array histone modification profiling by high-throughput sequencing methylation binding domain sequencing methylation profiling by high-throughput sequencing phenotype information study summary information transcriptome profiling by array transcriptome profiling by high-throughput sequencing whole genome sequencing

Dataset technologies

454 gs flx titanium ab 3730xl genetic analyzer ab 5500 genetic analyzer ab 5500xl genetic analyzer ab 5500xl-w genetic analysis system ab solid 4 system ab solid system abi_solid affymetrics_snp_6.0- affymetrix 6.0 array affymetrix snp 6.0 affymetrix snp6.0 affymetrix_snp6- agilent aperio aperio image - h&e stained tissue_section beadarray bgiseq-500 complete genomics cytoscan epic beadchip (illumina, san diego, ca) exiqon 7th generation mircury lna microrna microarray system genechip human mapping 250k nspi genome-wide human snp array 6.0 - thermo fisher scientific gridion gsa-md v3 h and e image hiseq x five hiseq x ten illumina illumina 15k illumina 2.5m illumina 450k illumina 850k illumina cytosnp 12 bead array illumina genome analyzer illumina genome analyzer ii illumina genome analyzer iix illumina hiscan illumina hiseq 1500 illumina hiseq 2000 illumina hiseq 2000;illumina illumina hiseq 2500 illumina hiseq 3000 illumina hiseq 4000 illumina hiseq x illumina ht 12 illumina humanexome array illumina humanmethylationepic v1 illumina humanwg-6 illumina humanwg-6 version 3 or illumina humanht-12 expression bead chip, combined on identical nucleotide universal identifiers. illumina infinium human global screening array gsamd-24v2-0_20024620_a1 beadchip illumina infinium humanmethylation450k illumina infinium methylationepic 850k illumina infinium methylationepic beadchip (850 k) illumina methylationepic array illumina miseq illumina novaseq 6000 illumina oncoarray illuminahuman awg-6 and ht12 illuminahuman ht12 infinium methylationepic beadchip array ion torrent pgm ion torrent proton ion torrent s5 ion torrent s5 xl life tech - solid minion miseq nanostring nanostring cancer immune nanostring cancer pathway nanostring ncounterâ® pancancer io 360â„¢ nanostring panel nextseq 2000 nextseq 500 nextseq 550 novaseq 6000 oligonucleotide beads of humanht-12 v4 r2 expression beadchips (illumina) oncoscan pacbio rs pacbio rs ii promethion qexactive plus sequel snp array unspecified

Phenotypes

[CL:0000038] [CL:0000050] [CL:0000499] [CL:0000523] [CL:0000557] [CL:0000576] [CL:0000893] [CL:0001024] [CL:0001059] [CL:0002324] [CL:0002326] [CL:0002420] [CL:0002489] [CL:0002555] [CL:0010004] [CL:2000006] [EFO:0000094] [EFO:0000174] [EFO:0000182] [EFO:0000183] [EFO:0000196] [EFO:0000220] [EFO:0000222] [EFO:0000228] [EFO:0000239] [EFO:0000248] [EFO:0000292] [EFO:0000305] [EFO:0000308] [EFO:0000309] [EFO:0000310] [EFO:0000311] [EFO:0000312] [EFO:0000313] [EFO:0000314] [EFO:0000315] [EFO:0000316] [EFO:0000317] [EFO:0000318] [EFO:0000319] [EFO:0000320] [EFO:0000321] [EFO:0000322] [EFO:0000323] [EFO:0000324] [EFO:0000325] [EFO:0000326] [EFO:0000327] [EFO:0000328] [EFO:0000329] [EFO:0000330] [EFO:0000331] [EFO:0000332] [EFO:0000333] [EFO:0000334] [EFO:0000335] [EFO:0000336] [EFO:0000337] [EFO:0000338] [EFO:0000339] [EFO:0000340] [EFO:0000341] [EFO:0000342] [EFO:0000343] [EFO:0000344] [EFO:0000345] [EFO:0000346] [EFO:0000347] [EFO:0000348] [EFO:0000349] [EFO:0000350] [EFO:0000351] [EFO:0000352] [EFO:0000353] [EFO:0000354] [EFO:0000355] [EFO:0000356] [EFO:0000357] [EFO:0000358] [EFO:0000359] [EFO:0000360] [EFO:0000361] [EFO:0000362] [EFO:0000363] [EFO:0000364] [EFO:0000365] [EFO:0000366] [EFO:0000367] [EFO:0000368] [EFO:0000369] [EFO:0000370] [EFO:0000371] [EFO:0000372] [EFO:0000373] [EFO:0000374] [EFO:0000402] [EFO:0000403] [EFO:0000437] [EFO:0000502] [EFO:0000503] [EFO:0000519] [EFO:0000571] [EFO:0000616] [EFO:0000621] [EFO:0000637] [EFO:0000641] [EFO:0000681] [EFO:0000691] [EFO:0000693] [EFO:0000702] [EFO:0000708] [EFO:0000730] [EFO:0000756] [EFO:0000760] [EFO:0000761] [EFO:0000762] [EFO:0000848] [EFO:0000869] [EFO:0000887] [EFO:0000934] [EFO:0000973] [EFO:0000980] [EFO:0001071] [EFO:0001075] [EFO:0001376] [EFO:0001378] [EFO:0001461] [EFO:0001639] [EFO:0001663] [EFO:0002394] [EFO:0002422] [EFO:0002424] [EFO:0002618] [EFO:0002787] [EFO:0002793] [EFO:0002916] [EFO:0002918] [EFO:0002939] [EFO:0003032] [EFO:0003060] [EFO:0003094] [EFO:0003137] [EFO:0003825] [EFO:0003897] [EFO:0003942] [EFO:0004422] [EFO:0004708] [EFO:0005235] [EFO:0005537] [EFO:0005543] [EFO:0005699] [EFO:0005701] [EFO:0005842] [EFO:0005844] [EFO:0006460] [EFO:0006545] [EFO:0006852] [EFO:0007143] [EFO:0007336] [EFO:0007365] [EFO:0007483] [EFO:0008498] [EFO:0008524] [EFO:0009052] [EFO:0009119] [EFO:0009120] [EFO:0009121] [EFO:0009375] [EFO:0009443] [EFO:0009744] [EFO:0009907] [EFO:1000028] [EFO:1000042] [EFO:1000043] [EFO:1000069] [EFO:1000075] [EFO:1000101] [EFO:1000138] [EFO:1000139] [EFO:1000144] [EFO:1000149] [EFO:1000231] [EFO:1000238] [EFO:1000292] [EFO:1000307] [EFO:1000318] [EFO:1000414] [EFO:1000416] [EFO:1000429] [EFO:1000646] [EFO:1000796] [EFO:1001038] [EFO:1001100] [EFO:1001480] [EFO:1001514] [EFO:1001515] [EFO:1001938] [EFO:1001946] [EFO:1001950] [EFO:1001951] [EFO:1001956] [EFO:1001958] [EFO:1001963] [EFO:1002008] [HP:0002716] [HP:0100880] [MONDO:0000430] [MONDO:0002397] [MONDO:0002601] [MONDO:0002627] [MONDO:0002630] [MONDO:0002631] [MONDO:0002678] [MONDO:0002924] [MONDO:0003002] [MONDO:0003142] [MONDO:0003537] [MONDO:0003572] [MONDO:0003751] [MONDO:0006058] [MONDO:0007254] [MONDO:0007255] [MONDO:0007256] [MONDO:0007257] [MONDO:0007258] [MONDO:0007259] [MONDO:0007260] [MONDO:0007261] [MONDO:0007262] [MONDO:0007263] [MONDO:0007264] [MONDO:0007265] [MONDO:0007266] [MONDO:0007267] [MONDO:0007268] [MONDO:0007269] [MONDO:0007270] [MONDO:0007271] [MONDO:0007272] [MONDO:0007273] [MONDO:0007274] [MONDO:0007275] [MONDO:0007276] [MONDO:0007277] [MONDO:0007278] [MONDO:0007279] [MONDO:0007280] [MONDO:0007281] [MONDO:0007282] [MONDO:0007283] [MONDO:0007284] [MONDO:0007285] [MONDO:0007286] [MONDO:0007287] [MONDO:0007288] [MONDO:0007289] [MONDO:0007290] [MONDO:0007291] [MONDO:0007292] [MONDO:0007293] [MONDO:0007294] [MONDO:0007295] [MONDO:0007296] [MONDO:0007297] [MONDO:0007298] [MONDO:0007299] [MONDO:0007300] [MONDO:0007301] [MONDO:0007302] [MONDO:0007303] [MONDO:0007304] [MONDO:0007305] [MONDO:0007306] [MONDO:0007307] [MONDO:0007308] [MONDO:0007309] [MONDO:0007310] [MONDO:0007311] [MONDO:0007312] [MONDO:0007313] [MONDO:0007314] [MONDO:0007315] [MONDO:0007316] [MONDO:0007317] [MONDO:0007318] [MONDO:0007319] [MONDO:0007320] [MONDO:0007321] [MONDO:0007322] [MONDO:0007323] [MONDO:0007324] [MONDO:0007325] [MONDO:0007326] [MONDO:0007327] [MONDO:0007328] [MONDO:0007329] [MONDO:0007330] [MONDO:0007331] [MONDO:0007332] [MONDO:0007333] [MONDO:0007334] [MONDO:0007335] [MONDO:0007336] [MONDO:0007337] [MONDO:0007338] [MONDO:0007339] [MONDO:0007340] [MONDO:0007341] [MONDO:0007342] [MONDO:0007343] [MONDO:0007344] [MONDO:0007345] [MONDO:0007346] [MONDO:0007347] [MONDO:0007348] [MONDO:0007349] [MONDO:0007350] [MONDO:0007351] [MONDO:0007352] [MONDO:0007353] [MONDO:0007354] [MONDO:0007355] [MONDO:0007356] [MONDO:0007357] [MONDO:0007358] [MONDO:0007359] [MONDO:0007360] [MONDO:0007361] [MONDO:0007362] [MONDO:0007363] [MONDO:0007364] [MONDO:0007365] [MONDO:0007366] [MONDO:0007367] [MONDO:0007368] [MONDO:0007369] [MONDO:0007370] [MONDO:0007371] [MONDO:0007372] [MONDO:0016690] [MONDO:0016691] [MONDO:0016692] [MONDO:0016700] [MONDO:0016735] [MONDO:0017349] [MONDO:0017387] [MONDO:0018177] [MONDO:0019457] [MONDO:0019474] [MONDO:0020511] [MONDO:0020580] [MONDO:0020663] [MONDO:0044335] [Orphanet:654] [PATO:0000461] [UBERON:0000178] [UBERON:0000310] [UBERON:0000992] [UBERON:0001134] [UBERON:0001156] [UBERON:0001159] [UBERON:0001968] [UBERON:0002046] [UBERON:0002328] [UBERON:0003889] [UBERON:0010393]

Duo

0000001 0000004 0000005 0000006 0000007 0000010 0000012 0000014 0000015 0000016 0000017 0000018 0000019 0000020 0000021 0000022 0000024 0000025 0000026 0000027 0000028 0000029 0000042 0000045 0000046

Domain

163 alchemab.com amc.seoul.kr amsterdamumc.nl aphp.fr bham.ac.uk bjmu.edu.cn cam.ac.uk cancerresearch.my carrerasresearch.org catholic.ac.kr cc ccia.org.au com crick.ac.uk cruk.cam.ac.uk cshs.org cuhk.edu.hk curie.fr dcu.ie dkfz duke ewha.ac.kr ewhain.net garvan.org.au gene.com gmail.com gumed.edu.pl gustaveroussy.fr hcancerbarretos.com.br heidelberg.de heliogenomics.com hin.ch hku.hk i iconcologia.net icr.ac.uk igc.ed.ac.uk igmm.ed.ac.uk ikmb.uni imperial.ac.uk ircc.it irst.emr.it jh.edu jhmi.edu ki.se kiel.de leeds.ac.uk ludwig.ox.ac.uk lyon.unicancer.fr mail.ubc.ca manchester.ac.uk mcgill.ca mdanderson.org med.ac.at medisin.uio.no mochsl.org.br mskcc.org ncc.go.jp ncc.re.kr nccs.com.sg nds.ox.ac.uk neurosurgery.ufl.edu nki.nl northwestern.edu nus.edu.sg nygenome.org oicr.on.ca petermac.org phsa.ca qmul.ac.uk ri.ncgm.go.jp rmp.uhn.ca scilifelab.se singhealth.com.sg sjtu.edu.cn stanford.edu stat.sinica.edu.tw stjude.org sydney.edu.au tdi.org tuni.fi uantwerpen.be ucalgary.ca ucl.ac.uk ucsf.edu ugent.be ukr.de ulb.be unimelb.edu.au uta.fi vhebron.net vhio.net wrh.ox.ac.uk yale.edu yuhs.ac

5624 results for "canc*"

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Domain

5624 results for "canc*"

in 24.78 milliseconds.

NanoString gene expression of PBMC from bladder cancer and RCC patients

Genome and transcriptome sequence data from a lung carcinoma patient

Genome and transcriptome sequence data from a pancreatic ductal adenocarcinoma patient

Genome and transcriptome sequence data from a pancreatic cancer patient

Genome and transcriptome sequence data from a cervical adenocarcinoma patient

Genome and transcriptome sequence data from a sex-cord stromal tumor patient

Genome and transcriptome sequence data from a pancreatic adenocarcinoma patient

Single Cell RNAseq of blood and tumor from renal cancer patients

Genome and transcriptome sequence data from a metastatic breast cancer patient

Genome and transcriptome sequence data from a pancreatic cancer patient

Genome and transcriptome sequence data from a pancreatic cancer patient

Genome and transcriptome sequence data from a pancreatic cancer patient

Genome and transcriptome sequence data from a neuroendocrine tumor (GIC) patient

Genome and transcriptome sequence data from a pancreatic cancer patient

Genome and transcriptome sequence data from a pancreatic cancer patient

Genome and transcriptome sequence data from an osteosarcoma patient

Genome and transcriptome sequence data from a pancreatic cancer patient

Genome and transcriptome sequence data from a colorectal adenocarcinoma patient

Genome and transcriptome sequence data from a malignant epithelial mesothelioma (THR) patient

Genome and transcriptome sequence data from a lung adenocarcinoma patient

Genome and transcriptome sequence data from a colorectal adenocarcinoma patient

Genome and transcriptome sequence data from a pancreatic adenocarcinoma patient

Genome and transcriptome sequence data from a malignant choroid melanoma patient

Genome and transcriptome sequence data from a pancreatic adenocarcinoma patient

Genome and transcriptome sequence data from a large intestine-colon cancer patient