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3335 results for "geneti"

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General Study Dataset

Type

blog dac dataset documentation study

Repository

dbgap ega jga

Federated ega

canada fegademo italy poland spain switzerland

Study type

affected sib pairs aggregate genomic data amplicon sequencing cancer genomics case set case-cohort case-control clinical cohort clinical diagnostic testing clinical genetic testing clinical trial cohort collection community control set copy number variation (cnv) cross-sectional epigenetics eqtl exome sequencing extended pedigrees family family linkage gene regulation study genotype genotype/expression array gwas individual-level genomic data interventional longitudinal longitudinal cohort marker discovery meta-analysis methods development mixed multicenter multiplex families nested case-control nuclear families observational other parent-offspring parent-offspring trios pooled clone sequencing population population genomics population-based control set probands prospective quantitative cross-sectional randomized reference set resequencing rnaseq sequencing sibling cohort single patient transcriptome analysis transcriptome sequencing transcriptome sequencing (tumor only) tumor tumor vs. matched-normal twin whole genome sequencing

Dataset types

amplicon sequencing chip-seq chromatin accessibility profiling by high-throughput sequencing exome sequencing genomic variant calling genotyping by array histone modification profiling by high-throughput sequencing methylation binding domain sequencing methylation profiling by high-throughput sequencing phenotype information study summary information transcriptome profiling by array transcriptome profiling by high-throughput sequencing whole genome sequencing

Dataset technologies

3730xl 450k 454 gs 454 gs flx titanium 454 gs flx+ 454 gs junior ab 310 genetic analyzer ab 3130 genetic analyzer ab 3130xl genetic analyzer ab 3500 genetic analyzer ab 3500xl genetic analyzer ab 3730 genetic analyzer ab 3730xl genetic analyzer ab 5500 genetic analyzer ab 5500xl genetic analyzer ab 5500xl-w genetic analysis system ab solid 4 system ab solid system 2.0 ab solid system 3.0 affymetrics axiom snp array 2.0 affymetrix axiom uk biobank + imputation to 1000gp3 and uk10k affymetrix cytoscan hd affymetrix genetitan affymetrix oncoscan affymetrix snp6.0 affymetrix ukbiobank array applied biosystems 3100 automated sequencer-genemarker v.1.6 (softgenetics) bgiseq-50 bgiseq-500 complete genomics dnbseq-g400 fast genotyped using uk biobank axiom array (applied biosystems/thermofisher), read on genetitan multi channel system (affymetrix/thermofisher) and analysed with the axiom analysis suite (applied biosystems/thermofisher) gridion hiseq x five hiseq x ten human cardio metabochip illumina arrays illumina cardio-metabochip illumina genome analyzer illumina genome analyzer ii illumina genome analyzer iix illumina hiscansq illumina hiseq 1000 illumina hiseq 1500 illumina hiseq 2000 illumina hiseq 2500 illumina hiseq 3000 illumina hiseq 4000 illumina humancoreexome beadchip array illumina humancoreexome-12v1-0 illumina humancoreexome-12v1-1_a illumina humanomni1-quad_v1-0 illumina humanomni1-quad_v1-0, humanomniexpress-12-v1-0, humanomniexpress-24-v1-1, humanomni25-8v1-2_a1 illumina humanomniexpress beadchip illumina humanomniexpress-12-v1-0 illumina humanomniexpress-12v1_j illumina humanomniexpress-24-v1-1 illumina infinium epic illumina infinium h3africa_2017_20021485_a2 illumina infiniumcoreexome-24v1-1_a illumina iseq 100 illumina miniseq illumina miseq illumina novaseq 6000 illumina novaseq x illumina omni2.5-8exome beadchip illumina omniexpress 24 v 1.1 chip illumina oncoarray ion genestudio s5 ion torrent pgm ion torrent proton ion torrent s5 ion torrent s5 xl massarrayiplex genotyping assay using the iplex gold genotyping kit mgiseq-2000rs minion nextseq 1000 nextseq 2000 nextseq 500 nextseq 550 pacbio rs promethion sanger(3730 xl) sequel iie unspecified

Phenotypes

CL:0000096 CL:0000235 CL:0000236 CL:0000499 CL:0000523 CL:0000576 CL:0000624 CL:0000863 CL:0000890 CL:0000893 CL:0002057 CL:0002324 CL:0002326 CL:0002420 CL:0002489 CL:0002555 CL:0010004 CL:2000006 EFO:0000198 EFO:0000209 EFO:0000220 EFO:0000222 EFO:0000296 EFO:0000361 EFO:0000403 EFO:0000621 EFO:0000761 EFO:0000848 EFO:0000887 EFO:0000934 EFO:0001905 EFO:0002429 EFO:0002508 EFO:0002933 EFO:0002937 EFO:0003060 EFO:0003942 EFO:0005740 EFO:0005842 EFO:0006852 EFO:0009119 EFO:0009121 EFO:1000042 EFO:1000043 EFO:1000138 EFO:1000139 EFO:1000388 EFO:1000416 EFO:1000575 EFO:1001830 EFO:1001958 EFO:1001963 EFO:1002008 HP:0000707 HP:0000726 HP:0000819 HP:0000820 HP:0000821 HP:0000822 HP:0000836 HP:0000964 HP:0001045 HP:0001250 HP:0001297 HP:0001300 HP:0001369 HP:0001370 HP:0001627 HP:0001658 HP:0002037 HP:0002099 HP:0002326 HP:0002608 HP:0002633 HP:0002664 HP:0002725 HP:0002758 HP:0002861 HP:0003124 HP:0003765 HP:0005110 HP:0005978 HP:0006510 HP:0008069 HP:0009725 HP:0010788 HP:0012125 HP:0012393 HP:0012539 HP:0032241 HP:0100013 HP:0100031 HP:0100279 HP:0100280 HP:0100526 HP:0100615 HP:0100651 HP:0100659 MONDO:0002025 MONDO:0002728 MONDO:0003537 MONDO:0005010 MONDO:0005052 MONDO:0005252 MONDO:0005301 MONDO:0005306 MONDO:0005814 MONDO:0007254 MONDO:0007432 MONDO:0020511 MONDO:0020560 NCIT:C115935 NCIT:C3099 NCIT:C3283 PATO:0000461 UBERON:0000178 UBERON:0000397 UBERON:0000992 UBERON:0001156 UBERON:0001159 UBERON:0001968 UBERON:0002046 UBERON:0002328 UBERON:0003889 UBERON:0010393 UBERON:0013756 [EFO:0002508]

Duo

0000001 0000004 0000005 0000006 0000007 0000011 0000012 0000014 0000015 0000016 0000017 0000018 0000019 0000020 0000021 0000024 0000025 0000026 0000027 0000028 0000029 0000042 0000044 0000045 0000046

Clear

Dataset that contains runs of submission 161

Description of runs dataset of submission 161
Dataset EGAD50000000253
Dataset that contains runs of submission 163

Description of runs dataset of submission 163
Dataset EGAD50000000257
Dataset that contains runs of submission 168

Description of runs dataset of submission 168
Dataset EGAD50000000264
Dataset that contains runs of submission 174

Description of runs dataset of submission 174
Dataset EGAD50000000269
Dataset that contains runs of submission 240

This is the description of runs dataset of submission 240
Dataset EGAD50000000349
Dataset that contains runs of submission 299

This is the description of runs dataset of submission 299
Dataset EGAD50000000403
Dataset that contains runs of submission 117

Description of runs dataset of submission 117
Dataset EGAD50000000166
Dataset that contains runs of submission 152

Description of runs dataset of submission 152
Dataset EGAD50000000235
Dataset that contains runs of submission 74

This is the description of runs dataset of submission 74
Dataset EGAD50000000456
Dataset that contains runs of submission 16

Description of runs dataset of submission 16
Dataset EGAD50000000295

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