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Dataset_for_linked_WES_and_WGS_data_from_EGAS00001004813 which belong also to EGAS00001005537 for germline controls of rare cancers

WES/WGS sequencing data of 37 germline runs, which were uploaded to umbrella studies. The sequencing was always paired. The WGS sequencing was on HiSeq X Ten using the Illumina TruSeq DNA Nano Kit. The WES Sequencing was on HiSeq4000 with Agilent Sureselect V5+UTR.

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Data Transfer Agreement for the German Cancer Research Center

To request access to the dataset please start a Data Access Request via the EGA DAC Portal. You will receive a HIPO DACO Info Form by email to collect information about the request, which has to be filled completely and signed by your PI. Your request will be evaluated by the responsible Data Access Committee (DAC) and our Data protection department (and innovation management if required). As soon as a positive decision is made, you will be provided with a data transfer agreement (DTA). After the DTA has been fully signed, access to the requested data is granted. To ensure that the process can be completed as quickly as possible, please note the following points: 1. The request in the EGA portal must be made by the responsible PI. 2. The information in the EGA portal must match the information on the HIPO DACO Info Form. In particular, the email address and the requested data sets must match. It is also important that all requested data sets are also listed on the HIPO DACO Info Form. For-profit companies are charged a fee per request.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Cancer Genomics
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00004186912 bam 4.7 GB
EGAF00004198029 bam 5.8 GB
EGAF00004454590 bam 136.3 GB
EGAF00004454591 bam 137.6 GB
EGAF00004454617 bam 142.5 GB
EGAF00004454664 bam 134.4 GB
EGAF00004454665 bam 137.5 GB
EGAF00004454686 bam 130.5 GB
EGAF00004454723 bam 139.6 GB
EGAF00004454732 bam 134.8 GB
EGAF00004457989 bam 148.6 GB
EGAF00004457997 bam 149.5 GB
EGAF00004457999 bam 137.8 GB
EGAF00004458029 bam 143.1 GB
EGAF00004458051 bam 152.7 GB
EGAF00004458064 bam 149.0 GB
EGAF00004458082 bam 194.3 GB
EGAF00004458091 bam 156.5 GB
EGAF00004693116 bam 146.7 GB
EGAF00004693120 bam 136.3 GB
EGAF00004721730 bam 147.2 GB
EGAF00004725346 bam 165.0 GB
EGAF00004725358 bam 137.4 GB
EGAF00004842210 bam 167.9 GB
EGAF00004842241 bam 141.8 GB
EGAF00004842247 bam 148.9 GB
EGAF00004915569 bam 128.2 GB
EGAF00004915574 bam 135.9 GB
EGAF00004915589 bam 145.0 GB
EGAF00004915601 bam 149.1 GB
EGAF00004915620 bam 150.8 GB
EGAF00004915621 bam 153.4 GB
EGAF00005002844 bam 143.3 GB
EGAF00005015898 1615783266360 131.1 GB
EGAF00006775862 1660572921025 159.4 GB
EGAF00007813214 1670328922271 133 Bytes
36 Files (4.8 TB)