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scRNA-seq of relapsed/refractory multipe myeloma with 10x Chromium (3´ v2)

This dataset includes 87 scRNA-seq samples of bone marrow aspirates of 20 relapsed/refractory patients generated with the 3´(v2) kit of the 10x Chromium platform. Bone marrow cells have been sorted using CD138 +/- fractions using magnetic beads for plasma cell enrichment and processed independently. For 14/20 patients multiple treatment timepoints are available that includes samples before treatment and at relapse during treatment.

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Data Transfer Agreement for the German Cancer Research Center

To request access to the dataset please start a Data Access Request via the EGA DAC Portal. You will receive a HIPO DACO Info Form by email to collect information about the request, which has to be filled completely and signed by your PI. Your request will be evaluated by the responsible Data Access Committee (DAC) and our Data protection department (and innovation management if required). As soon as a positive decision is made, you will be provided with a data transfer agreement (DTA). After the DTA has been fully signed, access to the requested data is granted. To ensure that the process can be completed as quickly as possible, please note the following points: 1. The request in the EGA portal must be made by the responsible PI. 2. The information in the EGA portal must match the information on the HIPO DACO Info Form. In particular, the email address and the requested data sets must match. It is also important that all requested data sets are also listed on the HIPO DACO Info Form. For-profit companies are charged a fee per request.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004805 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00004977240 fastq.gz 6.5 GB
EGAF00004977241 fastq.gz 20.8 GB
EGAF00004977242 fastq.gz 6.2 GB
EGAF00004977243 fastq.gz 18.7 GB
EGAF00004977244 fastq.gz 6.3 GB
EGAF00004977245 fastq.gz 18.8 GB
EGAF00004977246 fastq.gz 6.5 GB
EGAF00004977247 fastq.gz 18.2 GB
EGAF00004977248 fastq.gz 6.6 GB
EGAF00004977249 fastq.gz 19.7 GB
EGAF00004977250 fastq.gz 5.1 GB
EGAF00004977251 fastq.gz 15.0 GB
EGAF00004977252 fastq.gz 6.6 GB
EGAF00004977253 fastq.gz 19.2 GB
EGAF00004977254 fastq.gz 6.3 GB
EGAF00004977255 fastq.gz 19.3 GB
EGAF00004977256 fastq.gz 6.7 GB
EGAF00004977257 fastq.gz 18.5 GB
EGAF00004977258 fastq.gz 6.3 GB
EGAF00004977259 fastq.gz 17.7 GB
EGAF00004977260 fastq.gz 6.4 GB
EGAF00004977261 fastq.gz 18.9 GB
EGAF00004977262 fastq.gz 6.4 GB
EGAF00004977263 fastq.gz 18.5 GB
EGAF00004977264 fastq.gz 6.0 GB
EGAF00004977265 fastq.gz 16.6 GB
EGAF00004977266 fastq.gz 6.6 GB
EGAF00004977267 fastq.gz 20.6 GB
EGAF00004977268 fastq.gz 6.5 GB
EGAF00004977269 fastq.gz 19.3 GB
EGAF00004977270 fastq.gz 5.8 GB
EGAF00004977271 fastq.gz 16.5 GB
EGAF00004977272 fastq.gz 6.5 GB
EGAF00004977273 fastq.gz 19.6 GB
EGAF00004977274 fastq.gz 5.8 GB
EGAF00004977275 fastq.gz 17.0 GB
EGAF00004977276 fastq.gz 5.8 GB
EGAF00004977277 fastq.gz 17.2 GB
EGAF00004977278 fastq.gz 6.3 GB
EGAF00004977279 fastq.gz 18.8 GB
EGAF00004977280 fastq.gz 6.5 GB
EGAF00004977281 fastq.gz 20.1 GB
EGAF00004977282 fastq.gz 6.0 GB
EGAF00004977283 fastq.gz 16.4 GB
EGAF00004977284 fastq.gz 6.4 GB
EGAF00004977285 fastq.gz 19.0 GB
EGAF00004977286 fastq.gz 6.1 GB
EGAF00004977287 fastq.gz 16.5 GB
EGAF00004977288 fastq.gz 6.0 GB
EGAF00004977289 fastq.gz 17.7 GB
EGAF00004977290 fastq.gz 6.2 GB
EGAF00004977291 fastq.gz 19.0 GB
EGAF00004977292 fastq.gz 6.0 GB
EGAF00004977293 fastq.gz 17.0 GB
EGAF00004977294 fastq.gz 6.1 GB
EGAF00004977295 fastq.gz 17.9 GB
EGAF00004977296 fastq.gz 6.6 GB
EGAF00004977297 fastq.gz 20.6 GB
EGAF00004977298 fastq.gz 6.1 GB
EGAF00004977299 fastq.gz 16.5 GB
EGAF00004977300 fastq.gz 6.1 GB
EGAF00004977301 fastq.gz 17.7 GB
EGAF00004977302 fastq.gz 6.5 GB
EGAF00004977303 fastq.gz 19.5 GB
EGAF00004977304 fastq.gz 6.1 GB
EGAF00004977305 fastq.gz 17.0 GB
EGAF00004977306 fastq.gz 6.1 GB
EGAF00004977307 fastq.gz 18.1 GB
EGAF00004977308 fastq.gz 6.3 GB
EGAF00004977309 fastq.gz 18.2 GB
EGAF00004977310 fastq.gz 6.7 GB
EGAF00004977311 fastq.gz 19.5 GB
EGAF00004977312 fastq.gz 6.4 GB
EGAF00004977313 fastq.gz 19.0 GB
EGAF00004977314 fastq.gz 6.4 GB
EGAF00004977315 fastq.gz 19.6 GB
EGAF00004977316 fastq.gz 5.9 GB
EGAF00004977317 fastq.gz 15.8 GB
EGAF00004977318 fastq.gz 6.3 GB
EGAF00004977319 fastq.gz 19.4 GB
EGAF00004977320 fastq.gz 6.7 GB
EGAF00004977321 fastq.gz 21.4 GB
EGAF00004977322 fastq.gz 6.1 GB
EGAF00004977323 fastq.gz 18.2 GB
EGAF00004977324 fastq.gz 6.6 GB
EGAF00004977325 fastq.gz 20.3 GB
EGAF00004977326 fastq.gz 6.1 GB
EGAF00004977327 fastq.gz 17.7 GB
EGAF00004977328 fastq.gz 6.4 GB
EGAF00004977329 fastq.gz 19.2 GB
EGAF00004977330 fastq.gz 6.3 GB
EGAF00004977331 fastq.gz 19.0 GB
EGAF00004977332 fastq.gz 6.0 GB
EGAF00004977333 fastq.gz 17.8 GB
EGAF00004977334 fastq.gz 6.7 GB
EGAF00004977335 fastq.gz 19.6 GB
EGAF00004977336 fastq.gz 5.9 GB
EGAF00004977337 fastq.gz 16.7 GB
EGAF00004977338 fastq.gz 6.5 GB
EGAF00004977339 fastq.gz 18.8 GB
EGAF00004977340 fastq.gz 6.5 GB
EGAF00004977341 fastq.gz 18.2 GB
EGAF00004977342 fastq.gz 5.7 GB
EGAF00004977343 fastq.gz 15.4 GB
EGAF00004977344 fastq.gz 6.5 GB
EGAF00004977345 fastq.gz 18.8 GB
EGAF00004977346 fastq.gz 6.3 GB
EGAF00004977347 fastq.gz 18.5 GB
EGAF00004977348 fastq.gz 6.5 GB
EGAF00004977349 fastq.gz 18.9 GB
EGAF00004977350 fastq.gz 6.6 GB
EGAF00004977351 fastq.gz 19.0 GB
EGAF00004977352 fastq.gz 6.4 GB
EGAF00004977353 fastq.gz 19.7 GB
EGAF00004977354 fastq.gz 6.3 GB
EGAF00004977355 fastq.gz 18.5 GB
EGAF00004977356 fastq.gz 6.8 GB
EGAF00004977357 fastq.gz 17.1 GB
EGAF00004977358 fastq.gz 6.5 GB
EGAF00004977359 fastq.gz 20.5 GB
EGAF00004977360 fastq.gz 6.3 GB
EGAF00004977361 fastq.gz 18.8 GB
EGAF00004977362 fastq.gz 7.1 GB
EGAF00004977363 fastq.gz 18.0 GB
EGAF00004977364 fastq.gz 6.4 GB
EGAF00004977365 fastq.gz 18.0 GB
EGAF00004977366 fastq.gz 6.1 GB
EGAF00004977367 fastq.gz 16.3 GB
EGAF00004977368 fastq.gz 5.7 GB
EGAF00004977369 fastq.gz 16.3 GB
EGAF00004977370 fastq.gz 6.3 GB
EGAF00004977371 fastq.gz 17.9 GB
EGAF00004977372 fastq.gz 6.4 GB
EGAF00004977373 fastq.gz 19.1 GB
EGAF00004977374 fastq.gz 6.0 GB
EGAF00004977375 fastq.gz 16.4 GB
EGAF00004977376 fastq.gz 6.0 GB
EGAF00004977377 fastq.gz 17.4 GB
EGAF00004977378 fastq.gz 6.2 GB
EGAF00004977379 fastq.gz 16.4 GB
EGAF00004977380 fastq.gz 6.1 GB
EGAF00004977381 fastq.gz 18.4 GB
EGAF00004977382 fastq.gz 6.5 GB
EGAF00004977383 fastq.gz 18.4 GB
EGAF00004977384 fastq.gz 5.5 GB
EGAF00004977385 fastq.gz 15.5 GB
EGAF00004977386 fastq.gz 6.3 GB
EGAF00004977387 fastq.gz 17.5 GB
EGAF00004977388 fastq.gz 6.5 GB
EGAF00004977389 fastq.gz 18.8 GB
EGAF00004977390 fastq.gz 6.5 GB
EGAF00004977391 fastq.gz 17.9 GB
EGAF00004977392 fastq.gz 5.9 GB
EGAF00004977393 fastq.gz 16.6 GB
EGAF00004977394 fastq.gz 6.3 GB
EGAF00004977395 fastq.gz 17.3 GB
EGAF00004977396 fastq.gz 5.9 GB
EGAF00004977397 fastq.gz 16.5 GB
EGAF00004977398 fastq.gz 6.3 GB
EGAF00004977399 fastq.gz 18.6 GB
EGAF00004977400 fastq.gz 6.5 GB
EGAF00004977401 fastq.gz 20.2 GB
EGAF00004977402 fastq.gz 6.2 GB
EGAF00004977403 fastq.gz 18.9 GB
EGAF00004977404 fastq.gz 6.5 GB
EGAF00004977405 fastq.gz 19.8 GB
EGAF00004977406 fastq.gz 6.6 GB
EGAF00004977407 fastq.gz 21.1 GB
EGAF00004977408 fastq.gz 7.0 GB
EGAF00004977409 fastq.gz 18.5 GB
EGAF00004977410 fastq.gz 6.4 GB
EGAF00004977411 fastq.gz 18.9 GB
EGAF00004977412 fastq.gz 6.2 GB
EGAF00004977413 fastq.gz 18.8 GB
174 Files (2.1 TB)