Sequencing data for oesophageal and related samples - Nowicki-Osuch, Zhuang et al (bulk RNA)
Data supporting: “Deep molecular phenotyping reveals the identity of Barrett’s esophagus and its malignant transition.” Nowicki-Osuch, Zhuang et al. RNAseq (BAM files) 12 Barrett's samples 12 normal oesophageal samples 11 normal gastric cardia samples
- DAC: EGAC00001000010
- Technology: Illumina HiSeq 2000
- HMB DUO:0000006 (version: 2021-02-23)health or medical or biomedical researchThis data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.
- NPUNCU DUO:0000018 (version: 2021-02-23)not for profit, non commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
- PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
- GRU DUO:0000042 (version: 2021-02-23)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.
ICGC Data Access
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001000723 | Other | |
| EGAS00001000726 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00001796960 | bam | 5.8 GB | ||
| EGAF00001796961 | bam | 3.7 GB | ||
| EGAF00001796970 | bam | 15.8 GB | ||
| EGAF00001796971 | bam | 2.0 GB | ||
| EGAF00001797001 | bam | 4.1 GB | ||
| EGAF00001797002 | bam | 2.5 GB | ||
| EGAF00001797007 | bam | 2.4 GB | ||
| EGAF00001797009 | bam | 6.0 GB | ||
| EGAF00001797010 | bam | 4.0 GB | ||
| EGAF00001797012 | bam | 4.8 GB | ||
| EGAF00001797019 | bam | 6.1 GB | ||
| EGAF00001797021 | bam | 4.7 GB | ||
| EGAF00001797050 | bam | 6.2 GB | ||
| EGAF00001797051 | bam | 6.2 GB | ||
| EGAF00001797052 | bam | 6.2 GB | ||
| EGAF00001809076 | bam | 4.3 GB | ||
| EGAF00001809078 | bam | 3.9 GB | ||
| EGAF00001809080 | bam | 1.2 GB | ||
| EGAF00001809082 | bam | 1.9 GB | ||
| EGAF00001809086 | bam | 3.7 GB | ||
| EGAF00001809088 | bam | 2.0 GB | ||
| EGAF00001902618 | bam | 3.4 GB | ||
| EGAF00001902619 | bam | 3.5 GB | ||
| EGAF00001902621 | bam | 4.3 GB | ||
| EGAF00001902622 | bam | 4.0 GB | ||
| EGAF00001902624 | bam | 3.6 GB | ||
| EGAF00001902625 | bam | 3.9 GB | ||
| EGAF00001904375 | bam | 3.8 GB | ||
| EGAF00001904381 | bam | 4.7 GB | ||
| EGAF00001904383 | bam | 4.2 GB | ||
| EGAF00002559244 | bam | 2.9 GB | ||
| EGAF00002559279 | bam | 5.2 GB | ||
| EGAF00002559323 | bam | 4.6 GB | ||
| EGAF00002559324 | bam | 4.0 GB | ||
| EGAF00002559326 | bam | 3.4 GB | ||
| 35 Files (153.1 GB) | ||||