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LBC1921 gvcfs

297 members of the LBC1921 were sequenced using the Illumina HiSeq X platform. This dataset contains the gvcfs.

Request Access

Data access agreement for accessing the Lothian Birth Cohorts genetic and phenotypic data.

DATA ACCESS AGREEMENT Transfer of Data THIS AGREEMENT SETS OUT THE TERMS AND CONDITIONS ON WHICH ACCESS WILL BE GRANTED TO THE DATA SPECIFIED BELOW. BY SIGNING THIS AGREEMENT YOU AGREE TO BE BOUND BY THESE TERMS AND CONDITIONS 1. Defined Terms For the purpose of this Agreement, the following terms shall be understood to mean: “Agreement” this Data Access Agreement. “Confidential Information” any information of a confidential nature disclosed by Edinburgh to You in whatever form (whether written, oral, visual or electronic). “Data” [INSERT DESCRIPTION OF DATA]… all of which forms part of the Database. A full list of data items is appended with a Data Request Form. ] “Database” the Lothian Birth Cohort 1936 and the Lothian Birth Cohort 1921 Study Databases. “Derived Data” the data, datasets, algorithms and /or derived variables used therein which may be derived from the use or analysis of the Data by You in carrying out the Project. “Edinburgh” The University Court Of The University Of Edinburgh, a charitable body registered in Scotland under registration number SC005336, incorporated under the Universities (Scotland) Acts and having its main administrative offices at Old College, South Bridge Edinburgh, EH8 9YL. “Edinburgh Scientist” Dr Simon Cox, Director of the Lothian Birth Cohorts, Department of Psychology, University of Edinburgh, 7 George Square Edinburgh, EH8 9JZ. “Intellectual Property” means (i) patents, designs, trade marks and trade names (whether registered or unregistered), copyright and related rights, database rights, know-how and confidential information; (ii) all other intellectual property rights and similar or equivalent rights anywhere in the world which currently exist or are recognised in the future; and (iii) applications, extensions and renewals in relation to such rights. “Project” the project entitled “TBC”. “Recipient Institution” TBC “Recipient Scientist(s)” TBC “Term” TBC years “You” the Recipient Institution and/or the Recipient Scientist. 2. Use of the Data 2.1 You acknowledge and agree that only the Recipient Scientist(s) is/are permitted to have access to and to use the Data. The Recipient Scientist(s) will access and use the Data solely for the purpose of carrying out the Project and will not access or use the Data for any other purpose without prior written consent from Edinburgh. Recipient Institution shall in any event procure acceptance of the terms of this Agreement by all persons who have access to the Data. 2.2 You will comply with all security and operating requirements notified to you by Edinburgh and will use the Data in accordance with all applicable laws, regulations and research governance. 2.3 You undertake to make no attempt to link the Data to any other datasets whatsoever (including, without limitation, any external datasets or any datasets from the same patient cohort) held by different recipients or by You for different projects, without prior written consent from Edinburgh, or to use the Data to identify the Data subjects. 2.4 You will not use the Data for any commercial purpose or any purpose that is subject to consulting or licensing obligations to third parties without prior written consent from Edinburgh. 3. Ownership of Data, Derived Data and Intellectual Property 3.1 The Data and all intellectual property rights therein will remain the property of Edinburgh at all times and no right, title or interest in or to the Data is granted to You other than as expressly set out in this Agreement. 3.2 The Derived Data and all intellectual property rights therein will be owned by Edinburgh. Edinburgh agrees to provide You with a copy of the Derived Data and hereby grants to You a non-exclusive, royalty-free perpetual licence to use the Derived Data for health research purposes. 3.3 You shall have the right to develop Intellectual Property based on comparisons with your own data. 4. Confidentiality 4.1 You shall keep confidential the Data and any Confidential Information for so long as such Data and/or Confidential Information remain confidential in nature, notwithstanding termination or expiry of this Agreement. 4.2 The obligation in Clause 4.1 shall not apply where You can prove that the Data and/or Confidential Information: (a) has become public knowledge, other than through an unauthorised disclosure by You; (b) was already known to You prior to disclosure by Edinburgh or was independently developed by You without use of or recourse to the Data and/or Confidential Information; (c) was disclosed to You by a third party not under any obligation of confidence to Edinburgh; or (d) is required to be disclosed by law or by requirement of a regulatory body or court order. 5. Collaboration and Publications You agree to use reasonable endeavours to collaborate with Edinburgh with regard to Your analysis of the Data, with a view to publishing the results arising from Your analysis of the Data, jointly with Edinburgh. In any event, you agree that any publications made by You of results arising from Your analysis of the Data will be produced in accordance with normal academic practice including (without limitation) appropriate acknowledgement of co-authors, any published paper from which the Data derives, the version of the Data used, the role of Edinburgh, the relevant primary collectors of the Data and their funders. 6. DISCLAIMERS 6.1 YOU ACKNOWLEDGE AND AGREE THAT ACCESS TO, AND USE OF, THE DATA AND DERIVED DATA IS PROVIDED BY EDINBURGH ON AN “AS IS” BASIS. EDINBURGH GIVES NO WARRANTY, EXPRESS OR IMPLIED, THAT:- (a) THE DATA AND DERIVED DATA IS ACCURATE OR COMPLETE; (b) THE DATA AND DERIVED DATA IS FIT FOR ANY PARTICULAR PURPOSE; (c) YOUR USE OF THE DATA AND DERIVED DATA WILL NOT INFRINGE ANY THIRD PARTY INTELLECTUAL PROPERTY OR OTHER RIGHTS. 6.2 EACH PARTY AGREES THAT NEITHER PARTY SHALL BE LIABLE FOR ANY INDIRECT OR CONSEQUENTIAL DAMAGES INCURRED BY THE OTHER PARTY UNDER OR IN CONNECTION WITH THIS AGREEMENT HOWSOEVER CAUSED. 6.3 Nothing in this Agreement excludes, restricts or otherwise limits either party’s liability for any death or personal injury arising from its negligence or for any loss suffered by the other party as a result of it’s fraud. 7. Term and Termination of Access 7.1 You agree that You will access the Data during the Term only. You accept and agree that: (a) Edinburgh may terminate Your access to the Data forthwith upon any breach of this Agreement by You; and (b) Edinburgh may terminate Your access to the Data upon giving You one month’s written notice. 7.2 On termination or expiry of this Agreement You shall immediately destroy all tangible copies of the Data in Your possession and (to the extent possible to do so) delete all copies of the Data from Your computer systems and confirm in writing to Edinburgh that this has been done. 7.3 You acknowledge and agree that the provisions of this Agreement will continue in full force and effect following expiry of the Term or termination of Your access to the Data by Edinburgh pursuant to Clause 7.1. 8. Additional Data 8.1 If agreed in written with the Edinburgh Scientist, additional data items may be supplied to the Recipient Institution to facilitate the analysis as part of the Project, on the same terms as are contained in this Agreement. 9. Applicable law and jurisdiction You agree that Scots law shall govern this Agreement and the Scottish courts shall have exclusive jurisdiction over any matter relating to it. Edinburgh hereby accepts the foregoing terms and conditions: For and on behalf of Edinburgh: Signed: Date: Name: Title: The Recipient Institution hereby accepts the foregoing terms and conditions: For and on behalf of the Recipient Institution: Signed: Date: Name: Title: As the Recipient Scientist, I acknowledge receipt of a copy of this Agreement and confirm that I will abide by its terms insofar as those terms are applicable to me: Signed: Date: Name: LBC1921/36 Data request form Provisional title of study Principal researcher (include institution address, email & phone) Provisional author list Brief rationale for study Main variables to be analysed (variable names from data dictionary) Which journal(s) are you considering?

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00002638307 vcf.gz 19.1 GB
EGAF00002638308 vcf.gz 18.5 GB
EGAF00002638309 vcf.gz 16.3 GB
EGAF00002638310 vcf.gz 11.7 GB
EGAF00002638311 vcf.gz 10.3 GB
EGAF00002638312 vcf.gz 16.2 GB
EGAF00002638313 vcf.gz 7.9 GB
EGAF00002638314 vcf.gz 15.3 GB
EGAF00002638315 vcf.gz 3.1 GB
EGAF00002638316 vcf.gz 14.6 GB
EGAF00002638317 vcf.gz 16.2 GB
EGAF00002638318 vcf.gz 6.8 GB
EGAF00002638319 vcf.gz 5.0 GB
EGAF00002638320 vcf.gz 5.6 GB
EGAF00002638321 vcf.gz 6.8 GB
EGAF00002638322 vcf.gz 3.2 GB
EGAF00002638323 vcf.gz 3.5 GB
EGAF00002638324 vcf.gz 3.3 GB
EGAF00002638325 vcf.gz 8.3 GB
EGAF00002638326 vcf.gz 4.7 GB
EGAF00002638327 vcf.gz 9.1 GB
EGAF00002638328 vcf.gz 3.7 GB
EGAF00002638417 vcf.gz 16.6 GB
EGAF00002638418 vcf.gz 14.4 GB
EGAF00002638419 vcf.gz 4.0 GB
EGAF00002638420 vcf.gz 14.3 GB
EGAF00002638421 vcf.gz 14.5 GB
EGAF00002638422 vcf.gz 3.0 GB
EGAF00002638423 vcf.gz 15.5 GB
EGAF00002638424 vcf.gz 10.5 GB
EGAF00002638425 vcf.gz 13.3 GB
EGAF00002638426 vcf.gz 13.2 GB
EGAF00002638427 vcf.gz 15.5 GB
EGAF00002638428 vcf.gz 13.2 GB
EGAF00002638429 vcf.gz 13.4 GB
EGAF00002638430 vcf.gz 3.4 GB
EGAF00002638431 vcf.gz 5.1 GB
EGAF00002638432 vcf.gz 6.4 GB
EGAF00002638433 vcf.gz 6.6 GB
EGAF00002638434 vcf.gz 11.0 GB
EGAF00002638435 vcf.gz 5.3 GB
EGAF00002638436 vcf.gz 9.3 GB
EGAF00002638437 vcf.gz 6.2 GB
EGAF00002638438 vcf.gz 4.5 GB
EGAF00002638439 vcf.gz 7.0 GB
EGAF00002638440 vcf.gz 3.8 GB
EGAF00002638441 vcf.gz 3.0 GB
EGAF00002638442 vcf.gz 3.0 GB
EGAF00002638443 vcf.gz 5.0 GB
EGAF00002638444 vcf.gz 4.0 GB
EGAF00002638445 vcf.gz 11.7 GB
EGAF00002638446 vcf.gz 12.5 GB
EGAF00002638447 vcf.gz 3.8 GB
EGAF00002638448 vcf.gz 14.4 GB
EGAF00002638449 vcf.gz 1.9 GB
EGAF00002638450 vcf.gz 13.3 GB
EGAF00002638451 vcf.gz 12.4 GB
EGAF00002638498 vcf.gz 21.3 GB
EGAF00002638499 vcf.gz 22.6 GB
EGAF00002638500 vcf.gz 9.0 GB
EGAF00002638501 vcf.gz 16.4 GB
EGAF00002638502 vcf.gz 8.5 GB
EGAF00002638503 vcf.gz 3.7 GB
EGAF00002638504 vcf.gz 3.6 GB
EGAF00002638505 vcf.gz 2.6 GB
EGAF00002638506 vcf.gz 13.8 GB
EGAF00002638507 vcf.gz 11.8 GB
EGAF00002638508 vcf.gz 16.8 GB
EGAF00002638509 vcf.gz 10.5 GB
EGAF00002638510 vcf.gz 15.9 GB
EGAF00002638511 vcf.gz 4.5 GB
EGAF00002638512 vcf.gz 12.5 GB
EGAF00002638513 vcf.gz 5.5 GB
EGAF00002638514 vcf.gz 13.2 GB
EGAF00002638515 vcf.gz 10.1 GB
EGAF00002638516 vcf.gz 5.4 GB
EGAF00002638517 vcf.gz 4.9 GB
EGAF00002638518 vcf.gz 13.5 GB
EGAF00002638519 vcf.gz 5.8 GB
EGAF00002638520 vcf.gz 5.7 GB
EGAF00002638521 vcf.gz 4.5 GB
EGAF00002638522 vcf.gz 3.6 GB
EGAF00002638523 vcf.gz 5.4 GB
EGAF00002638524 vcf.gz 4.4 GB
EGAF00002638525 vcf.gz 2.9 GB
EGAF00002638526 vcf.gz 2.4 GB
EGAF00002638527 vcf.gz 3.1 GB
EGAF00002638528 vcf.gz 3.8 GB
EGAF00002638529 vcf.gz 4.0 GB
EGAF00002638530 vcf.gz 7.0 GB
EGAF00002638531 vcf.gz 13.0 GB
EGAF00002638532 vcf.gz 12.5 GB
EGAF00002638533 vcf.gz 3.8 GB
EGAF00002638534 vcf.gz 3.4 GB
EGAF00002638535 vcf.gz 3.8 GB
EGAF00002638536 vcf.gz 3.1 GB
EGAF00002638537 vcf.gz 6.2 GB
EGAF00002638538 vcf.gz 3.9 GB
EGAF00002638539 vcf.gz 3.2 GB
EGAF00002638595 vcf.gz 18.1 GB
EGAF00002638596 vcf.gz 11.6 GB
EGAF00002638597 vcf.gz 11.9 GB
EGAF00002638598 vcf.gz 8.3 GB
EGAF00002638599 vcf.gz 10.5 GB
EGAF00002638600 vcf.gz 4.2 GB
EGAF00002638601 vcf.gz 3.8 GB
EGAF00002638602 vcf.gz 25.3 GB
EGAF00002638603 vcf.gz 11.0 GB
EGAF00002638604 vcf.gz 5.7 GB
EGAF00002638605 vcf.gz 18.1 GB
EGAF00002638606 vcf.gz 14.1 GB
EGAF00002638607 vcf.gz 13.4 GB
EGAF00002638608 vcf.gz 12.1 GB
EGAF00002638609 vcf.gz 2.8 GB
EGAF00002638610 vcf.gz 6.1 GB
EGAF00002638611 vcf.gz 16.2 GB
EGAF00002638612 vcf.gz 12.5 GB
EGAF00002638613 vcf.gz 3.7 GB
EGAF00002638614 vcf.gz 6.0 GB
EGAF00002638615 vcf.gz 5.8 GB
EGAF00002638616 vcf.gz 7.3 GB
EGAF00002638617 vcf.gz 5.9 GB
EGAF00002638618 vcf.gz 3.2 GB
EGAF00002638619 vcf.gz 11.8 GB
EGAF00002638620 vcf.gz 2.6 GB
EGAF00002638621 vcf.gz 6.5 GB
EGAF00002638622 vcf.gz 7.2 GB
EGAF00002638623 vcf.gz 12.7 GB
EGAF00002638624 vcf.gz 5.4 GB
EGAF00002638625 vcf.gz 5.2 GB
EGAF00002638626 vcf.gz 3.7 GB
EGAF00002638627 vcf.gz 5.1 GB
EGAF00002638628 vcf.gz 3.4 GB
EGAF00002638629 vcf.gz 4.9 GB
EGAF00002638630 vcf.gz 2.8 GB
EGAF00002638631 vcf.gz 8.5 GB
EGAF00002638632 vcf.gz 3.1 GB
EGAF00002638633 vcf.gz 2.9 GB
EGAF00002638634 vcf.gz 5.7 GB
EGAF00002638635 vcf.gz 13.9 GB
EGAF00002638636 vcf.gz 12.4 GB
EGAF00002638637 vcf.gz 2.9 GB
EGAF00002638693 vcf.gz 17.0 GB
EGAF00002638694 vcf.gz 19.5 GB
EGAF00002638695 vcf.gz 14.2 GB
EGAF00002638696 vcf.gz 14.0 GB
EGAF00002638697 vcf.gz 10.7 GB
EGAF00002638698 vcf.gz 13.2 GB
EGAF00002638699 vcf.gz 13.6 GB
EGAF00002638700 vcf.gz 7.2 GB
EGAF00002638701 vcf.gz 11.7 GB
EGAF00002638702 vcf.gz 3.6 GB
EGAF00002638703 vcf.gz 4.1 GB
EGAF00002638704 vcf.gz 10.0 GB
EGAF00002638705 vcf.gz 10.8 GB
EGAF00002638706 vcf.gz 5.8 GB
EGAF00002638707 vcf.gz 14.2 GB
EGAF00002638708 vcf.gz 13.5 GB
EGAF00002638709 vcf.gz 11.3 GB
EGAF00002638710 vcf.gz 11.3 GB
EGAF00002638711 vcf.gz 14.2 GB
EGAF00002638712 vcf.gz 10.6 GB
EGAF00002638713 vcf.gz 11.5 GB
EGAF00002638714 vcf.gz 3.6 GB
EGAF00002638715 vcf.gz 2.8 GB
EGAF00002638716 vcf.gz 4.0 GB
EGAF00002638717 vcf.gz 3.9 GB
EGAF00002638718 vcf.gz 4.0 GB
EGAF00002638719 vcf.gz 4.8 GB
EGAF00002638720 vcf.gz 4.9 GB
EGAF00002638721 vcf.gz 5.8 GB
EGAF00002638722 vcf.gz 5.0 GB
EGAF00002638723 vcf.gz 5.4 GB
EGAF00002638724 vcf.gz 6.1 GB
EGAF00002638725 vcf.gz 7.1 GB
EGAF00002638726 vcf.gz 2.9 GB
EGAF00002638727 vcf.gz 2.9 GB
EGAF00002638728 vcf.gz 11.9 GB
EGAF00002638795 vcf.gz 4.1 GB
EGAF00002638796 vcf.gz 2.6 GB
EGAF00002638797 vcf.gz 12.7 GB
EGAF00002638798 vcf.gz 2.9 GB
EGAF00002638799 vcf.gz 7.2 GB
EGAF00002638800 vcf.gz 4.1 GB
EGAF00002638801 vcf.gz 3.4 GB
EGAF00002638802 vcf.gz 9.5 GB
EGAF00002638803 vcf.gz 3.3 GB
EGAF00002638804 vcf.gz 7.4 GB
EGAF00002638805 vcf.gz 8.9 GB
EGAF00002638806 vcf.gz 11.6 GB
EGAF00002638807 vcf.gz 7.0 GB
EGAF00002638808 vcf.gz 3.1 GB
EGAF00002638809 vcf.gz 9.7 GB
EGAF00002638810 vcf.gz 5.6 GB
EGAF00002638811 vcf.gz 5.8 GB
EGAF00002638812 vcf.gz 5.5 GB
EGAF00002638813 vcf.gz 7.3 GB
EGAF00002638814 vcf.gz 2.8 GB
EGAF00002638815 vcf.gz 13.2 GB
EGAF00002638816 vcf.gz 10.9 GB
EGAF00002638817 vcf.gz 6.4 GB
EGAF00002638818 vcf.gz 3.1 GB
EGAF00002638819 vcf.gz 4.1 GB
EGAF00002638820 vcf.gz 9.8 GB
EGAF00002638821 vcf.gz 11.9 GB
EGAF00002638822 vcf.gz 2.7 GB
EGAF00002638823 vcf.gz 3.1 GB
EGAF00002638824 vcf.gz 11.6 GB
EGAF00002638825 vcf.gz 2.9 GB
EGAF00002638826 vcf.gz 2.9 GB
EGAF00002638827 vcf.gz 3.4 GB
EGAF00002638876 vcf.gz 2.5 GB
EGAF00002638877 vcf.gz 3.0 GB
EGAF00002638878 vcf.gz 8.2 GB
EGAF00002638879 vcf.gz 3.0 GB
EGAF00002638880 vcf.gz 6.0 GB
EGAF00002638881 vcf.gz 15.0 GB
EGAF00002638882 vcf.gz 12.7 GB
EGAF00002638883 vcf.gz 19.8 GB
EGAF00002638884 vcf.gz 10.0 GB
EGAF00002638885 vcf.gz 15.9 GB
EGAF00002638886 vcf.gz 20.6 GB
EGAF00002638887 vcf.gz 4.8 GB
EGAF00002638888 vcf.gz 2.7 GB
EGAF00002638889 vcf.gz 3.2 GB
EGAF00002638890 vcf.gz 3.9 GB
EGAF00002638891 vcf.gz 5.0 GB
EGAF00002638892 vcf.gz 5.5 GB
EGAF00002638893 vcf.gz 7.4 GB
EGAF00002638894 vcf.gz 4.6 GB
EGAF00002638895 vcf.gz 5.6 GB
EGAF00002638896 vcf.gz 7.6 GB
EGAF00002638897 vcf.gz 6.2 GB
EGAF00002638898 vcf.gz 17.5 GB
EGAF00002638899 vcf.gz 5.6 GB
EGAF00002638900 vcf.gz 3.4 GB
EGAF00002638901 vcf.gz 9.6 GB
EGAF00002638902 vcf.gz 4.6 GB
EGAF00002638903 vcf.gz 5.6 GB
EGAF00002638904 vcf.gz 7.2 GB
EGAF00002638905 vcf.gz 13.0 GB
EGAF00002638906 vcf.gz 16.7 GB
EGAF00002638907 vcf.gz 4.8 GB
EGAF00002638908 vcf.gz 14.6 GB
EGAF00002638964 vcf.gz 3.2 GB
EGAF00002638965 vcf.gz 5.8 GB
EGAF00002638966 vcf.gz 5.2 GB
EGAF00002638967 vcf.gz 6.5 GB
EGAF00002638968 vcf.gz 3.6 GB
EGAF00002638969 vcf.gz 3.6 GB
EGAF00002638970 vcf.gz 5.9 GB
EGAF00002638971 vcf.gz 6.6 GB
EGAF00002638972 vcf.gz 12.2 GB
EGAF00002638973 vcf.gz 5.9 GB
EGAF00002638974 vcf.gz 4.5 GB
EGAF00002638975 vcf.gz 10.9 GB
EGAF00002638976 vcf.gz 10.2 GB
EGAF00002638977 vcf.gz 17.5 GB
EGAF00002638978 vcf.gz 4.9 GB
EGAF00002638979 vcf.gz 3.3 GB
EGAF00002638980 vcf.gz 5.1 GB
EGAF00002638981 vcf.gz 15.7 GB
EGAF00002638982 vcf.gz 11.9 GB
EGAF00002638983 vcf.gz 5.6 GB
EGAF00002638984 vcf.gz 9.2 GB
EGAF00002638985 vcf.gz 16.7 GB
EGAF00002638986 vcf.gz 4.2 GB
EGAF00002638987 vcf.gz 12.1 GB
EGAF00002638988 vcf.gz 2.3 GB
EGAF00002638989 vcf.gz 11.4 GB
EGAF00002638990 vcf.gz 3.0 GB
EGAF00002638991 vcf.gz 2.4 GB
EGAF00002638992 vcf.gz 4.3 GB
EGAF00002638993 vcf.gz 3.8 GB
EGAF00002638994 vcf.gz 4.0 GB
EGAF00002638995 vcf.gz 3.2 GB
EGAF00002638996 vcf.gz 3.8 GB
EGAF00002639048 vcf.gz 13.2 GB
EGAF00002639049 vcf.gz 3.3 GB
EGAF00002639050 vcf.gz 14.0 GB
EGAF00002639051 vcf.gz 9.0 GB
EGAF00002639052 vcf.gz 13.1 GB
EGAF00002639053 vcf.gz 9.1 GB
EGAF00002639054 vcf.gz 10.1 GB
EGAF00002639055 vcf.gz 9.6 GB
EGAF00002639056 vcf.gz 2.4 GB
EGAF00002639057 vcf.gz 3.5 GB
EGAF00002639058 vcf.gz 10.1 GB
EGAF00002639059 vcf.gz 3.9 GB
EGAF00002639060 vcf.gz 2.6 GB
EGAF00002639061 vcf.gz 5.2 GB
EGAF00002639062 vcf.gz 14.3 GB
EGAF00002639063 vcf.gz 4.4 GB
EGAF00002639064 vcf.gz 3.0 GB
EGAF00002639065 vcf.gz 13.2 GB
EGAF00002639066 vcf.gz 2.7 GB
EGAF00002639067 vcf.gz 2.1 GB
297 Files (2.4 TB)