Sequencing data for oesophageal and related samples - Katz-Summercorn, Jammula et al (WGS)
Data supporting: “Multi-omic cross-sectional cohort study of pre-malignant Barrett’s esophagus reveals structural variation and retrotransposon activity occur early in cancer evolution.” Katz-Summercorn, Jammula et al. WGS (BAM files)
- DAC: EGAC00001000010
- Technology: Illumina HiSeq 2000
- HMB DUO:0000006 (version: 2021-02-23)health or medical or biomedical researchThis data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.
- NPUNCU DUO:0000018 (version: 2021-02-23)not for profit, non commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
- PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
- GRU DUO:0000042 (version: 2021-02-23)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.
ICGC Data Access
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001000723 | Other | |
| EGAS00001000726 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00000501971 | bam | 85.9 GB | ||
| EGAF00000501972 | bam | 91.7 GB | ||
| EGAF00000501973 | bam | 84.2 GB | ||
| EGAF00000501981 | bam | 175.8 GB | ||
| EGAF00000501982 | bam | 175.8 GB | ||
| EGAF00000501983 | bam | 204.5 GB | ||
| EGAF00000525200 | bam | 140.3 GB | ||
| EGAF00000525201 | bam | 181.1 GB | ||
| EGAF00000525202 | bam | 163.2 GB | ||
| EGAF00000525437 | bam | 137.9 GB | ||
| EGAF00000525438 | bam | 116.9 GB | ||
| EGAF00000525439 | bam | 83.6 GB | ||
| EGAF00000525440 | bam | 120.8 GB | ||
| EGAF00000525441 | bam | 130.2 GB | ||
| EGAF00000525442 | bam | 95.4 GB | ||
| EGAF00000525443 | bam | 109.7 GB | ||
| EGAF00000525444 | bam | 122.9 GB | ||
| EGAF00000525455 | bam | 129.3 GB | ||
| EGAF00000525456 | bam | 193.5 GB | ||
| EGAF00000525457 | bam | 160.6 GB | ||
| EGAF00000525458 | bam | 148.0 GB | ||
| EGAF00000525459 | bam | 162.7 GB | ||
| EGAF00000525460 | bam | 158.2 GB | ||
| EGAF00000525461 | bam | 153.7 GB | ||
| EGAF00000525462 | bam | 142.3 GB | ||
| EGAF00000525463 | bam | 198.2 GB | ||
| EGAF00000525464 | bam | 154.8 GB | ||
| EGAF00000525504 | bam | 115.5 GB | ||
| EGAF00000525505 | bam | 96.7 GB | ||
| EGAF00000525507 | bam | 93.5 GB | ||
| EGAF00000530863 | bam | 130.6 GB | ||
| EGAF00000530872 | bam | 68.2 GB | ||
| EGAF00000530875 | bam | 167.5 GB | ||
| EGAF00000530908 | bam | 140.2 GB | ||
| EGAF00000560125 | bam | 164.1 GB | ||
| EGAF00000560126 | bam | 165.6 GB | ||
| EGAF00000560127 | bam | 152.7 GB | ||
| EGAF00000560128 | bam | 159.5 GB | ||
| EGAF00000560129 | bam | 165.9 GB | ||
| EGAF00000560130 | bam | 160.0 GB | ||
| EGAF00000560147 | bam | 101.4 GB | ||
| EGAF00000560148 | bam | 105.1 GB | ||
| EGAF00000560149 | bam | 122.6 GB | ||
| EGAF00000560150 | bam | 192.2 GB | ||
| EGAF00000560151 | bam | 122.5 GB | ||
| EGAF00000560152 | bam | 109.4 GB | ||
| EGAF00000586502 | bam | 192.1 GB | ||
| EGAF00000586533 | bam | 105.9 GB | ||
| EGAF00000661636 | bam | 102.9 GB | ||
| EGAF00000661642 | bam | 93.8 GB | ||
| EGAF00000661651 | bam | 65.8 GB | ||
| EGAF00000661653 | bam | 76.6 GB | ||
| EGAF00000661678 | bam | 128.1 GB | ||
| EGAF00000661709 | bam | 130.8 GB | ||
| EGAF00000661713 | bam | 138.7 GB | ||
| EGAF00000661714 | bam | 124.0 GB | ||
| EGAF00000814056 | bam | 107.8 GB | ||
| EGAF00000814065 | bam | 103.5 GB | ||
| EGAF00000814100 | bam | 60.6 GB | ||
| EGAF00000814164 | bam | 54.2 GB | ||
| EGAF00000905635 | bam | 49.6 GB | ||
| EGAF00000905664 | bam | 90.8 GB | ||
| EGAF00001180165 | bam | 52.2 GB | ||
| EGAF00001180169 | bam | 50.3 GB | ||
| EGAF00001180175 | bam | 76.8 GB | ||
| EGAF00001180176 | bam | 79.8 GB | ||
| EGAF00001415391 | bam | 63.6 GB | ||
| EGAF00001415392 | bam | 66.9 GB | ||
| EGAF00001415393 | bam | 67.3 GB | ||
| EGAF00001415394 | bam | 60.3 GB | ||
| EGAF00001415395 | bam | 66.1 GB | ||
| EGAF00001415396 | bam | 65.6 GB | ||
| EGAF00001415397 | bam | 62.5 GB | ||
| EGAF00001415398 | bam | 63.6 GB | ||
| EGAF00001415399 | bam | 57.9 GB | ||
| EGAF00001415400 | bam | 64.6 GB | ||
| EGAF00001415401 | bam | 66.2 GB | ||
| EGAF00001415402 | bam | 70.5 GB | ||
| EGAF00001415403 | bam | 67.5 GB | ||
| EGAF00001415404 | bam | 99.1 GB | ||
| EGAF00001415405 | bam | 123.9 GB | ||
| EGAF00001415406 | bam | 91.1 GB | ||
| EGAF00001415407 | bam | 125.9 GB | ||
| EGAF00001415409 | bam | 124.4 GB | ||
| EGAF00001415413 | bam | 116.0 GB | ||
| EGAF00001415414 | bam | 127.7 GB | ||
| EGAF00001415415 | bam | 113.3 GB | ||
| EGAF00001415416 | bam | 119.3 GB | ||
| EGAF00001415417 | bam | 120.1 GB | ||
| EGAF00001415418 | bam | 122.2 GB | ||
| EGAF00001415419 | bam | 115.4 GB | ||
| EGAF00001415420 | bam | 122.6 GB | ||
| EGAF00001415421 | bam | 125.7 GB | ||
| EGAF00001415422 | bam | 128.4 GB | ||
| EGAF00001415423 | bam | 124.7 GB | ||
| EGAF00001415424 | bam | 129.0 GB | ||
| EGAF00001415425 | bam | 129.3 GB | ||
| EGAF00001415426 | bam | 136.6 GB | ||
| EGAF00001415427 | bam | 133.8 GB | ||
| EGAF00001415428 | bam | 126.9 GB | ||
| EGAF00001415429 | bam | 126.7 GB | ||
| EGAF00001415430 | bam | 118.8 GB | ||
| EGAF00001415437 | bam | 58.6 GB | ||
| EGAF00001415449 | bam | 50.6 GB | ||
| EGAF00001415450 | bam | 69.4 GB | ||
| EGAF00001415451 | bam | 67.2 GB | ||
| EGAF00001415453 | bam | 62.1 GB | ||
| EGAF00001415457 | bam | 69.0 GB | ||
| EGAF00001415458 | bam | 65.3 GB | ||
| EGAF00001415459 | bam | 69.1 GB | ||
| EGAF00001415460 | bam | 73.0 GB | ||
| EGAF00001415461 | bam | 57.5 GB | ||
| EGAF00001680661 | bam | 72.4 GB | ||
| EGAF00001680662 | bam | 69.0 GB | ||
| EGAF00001680663 | bam | 84.8 GB | ||
| EGAF00001680664 | bam | 78.5 GB | ||
| EGAF00001680665 | bam | 81.3 GB | ||
| EGAF00001680666 | bam | 81.7 GB | ||
| EGAF00001680667 | bam | 74.2 GB | ||
| EGAF00001680668 | bam | 76.7 GB | ||
| EGAF00001680669 | bam | 80.4 GB | ||
| EGAF00001680670 | bam | 85.9 GB | ||
| EGAF00001680671 | bam | 74.5 GB | ||
| EGAF00001680672 | bam | 74.6 GB | ||
| EGAF00001680673 | bam | 81.4 GB | ||
| EGAF00001680674 | bam | 85.3 GB | ||
| EGAF00001680675 | bam | 77.8 GB | ||
| EGAF00001680676 | bam | 81.4 GB | ||
| EGAF00001680677 | bam | 74.8 GB | ||
| EGAF00001680678 | bam | 85.7 GB | ||
| EGAF00001680680 | bam | 81.7 GB | ||
| EGAF00001680681 | bam | 80.7 GB | ||
| EGAF00001680682 | bam | 79.7 GB | ||
| EGAF00001680683 | bam | 81.1 GB | ||
| EGAF00001680684 | bam | 76.4 GB | ||
| EGAF00001680725 | bam | 74.9 GB | ||
| EGAF00001680726 | bam | 82.2 GB | ||
| EGAF00001680727 | bam | 80.4 GB | ||
| EGAF00001680731 | bam | 76.8 GB | ||
| EGAF00001680732 | bam | 79.0 GB | ||
| EGAF00001680733 | bam | 75.4 GB | ||
| EGAF00001680734 | bam | 144.7 GB | ||
| EGAF00001680735 | bam | 163.2 GB | ||
| EGAF00001680736 | bam | 169.3 GB | ||
| EGAF00001680737 | bam | 144.1 GB | ||
| EGAF00001680738 | bam | 153.3 GB | ||
| EGAF00001680739 | bam | 138.7 GB | ||
| EGAF00001680740 | bam | 165.9 GB | ||
| EGAF00001680741 | bam | 155.2 GB | ||
| EGAF00001680742 | bam | 154.5 GB | ||
| EGAF00001680743 | bam | 155.1 GB | ||
| EGAF00001680744 | bam | 139.7 GB | ||
| EGAF00001680745 | bam | 152.9 GB | ||
| EGAF00001680746 | bam | 157.7 GB | ||
| EGAF00001680747 | bam | 157.8 GB | ||
| EGAF00001680748 | bam | 155.3 GB | ||
| EGAF00001680749 | bam | 150.5 GB | ||
| EGAF00001680750 | bam | 152.1 GB | ||
| EGAF00001680751 | bam | 152.6 GB | ||
| EGAF00001680753 | bam | 155.0 GB | ||
| EGAF00001680754 | bam | 156.8 GB | ||
| EGAF00001680755 | bam | 162.6 GB | ||
| EGAF00001680756 | bam | 128.3 GB | ||
| EGAF00001680757 | bam | 147.7 GB | ||
| EGAF00001680758 | bam | 134.9 GB | ||
| EGAF00001680759 | bam | 132.5 GB | ||
| EGAF00001680760 | bam | 148.7 GB | ||
| EGAF00001680761 | bam | 139.7 GB | ||
| EGAF00001680762 | bam | 142.6 GB | ||
| EGAF00001680763 | bam | 151.8 GB | ||
| EGAF00001904468 | bam | 132.2 GB | ||
| EGAF00001904469 | bam | 133.4 GB | ||
| EGAF00001904470 | bam | 130.9 GB | ||
| EGAF00001904471 | bam | 137.0 GB | ||
| EGAF00001904493 | bam | 64.3 GB | ||
| EGAF00001904497 | bam | 67.3 GB | ||
| EGAF00001904498 | bam | 65.5 GB | ||
| EGAF00001904499 | bam | 65.0 GB | ||
| EGAF00002549934 | bam | 72.8 GB | ||
| EGAF00002549935 | bam | 74.5 GB | ||
| EGAF00002549936 | bam | 77.8 GB | ||
| EGAF00002549941 | bam | 71.9 GB | ||
| EGAF00002549945 | bam | 72.2 GB | ||
| EGAF00002549949 | bam | 67.8 GB | ||
| EGAF00002549961 | bam | 69.7 GB | ||
| EGAF00002549972 | bam | 135.0 GB | ||
| EGAF00002549973 | bam | 130.4 GB | ||
| EGAF00002549974 | bam | 130.1 GB | ||
| EGAF00002549975 | bam | 127.7 GB | ||
| EGAF00002549976 | bam | 109.0 GB | ||
| EGAF00002549977 | bam | 121.4 GB | ||
| EGAF00002549978 | bam | 132.0 GB | ||
| EGAF00002549979 | bam | 132.7 GB | ||
| EGAF00002549980 | bam | 128.7 GB | ||
| EGAF00002549982 | bam | 111.0 GB | ||
| EGAF00002549983 | bam | 134.9 GB | ||
| EGAF00002549984 | bam | 136.6 GB | ||
| EGAF00002549985 | bam | 133.1 GB | ||
| EGAF00002549986 | bam | 128.2 GB | ||
| EGAF00002549987 | bam | 130.7 GB | ||
| EGAF00002549988 | bam | 110.2 GB | ||
| EGAF00002549989 | bam | 126.1 GB | ||
| EGAF00002549990 | bam | 137.5 GB | ||
| EGAF00002549991 | bam | 132.7 GB | ||
| EGAF00002549992 | bam | 129.0 GB | ||
| EGAF00002549993 | bam | 134.6 GB | ||
| EGAF00002549994 | bam | 116.8 GB | ||
| EGAF00002549995 | bam | 124.6 GB | ||
| EGAF00002549996 | bam | 131.7 GB | ||
| EGAF00002549997 | bam | 135.0 GB | ||
| EGAF00002549998 | bam | 116.1 GB | ||
| EGAF00002549999 | bam | 126.1 GB | ||
| EGAF00002550000 | bam | 113.5 GB | ||
| EGAF00002550001 | bam | 121.0 GB | ||
| EGAF00002550002 | bam | 134.0 GB | ||
| EGAF00002550003 | bam | 135.1 GB | ||
| EGAF00002550004 | bam | 128.2 GB | ||
| EGAF00002550006 | bam | 123.3 GB | ||
| EGAF00002550007 | bam | 133.7 GB | ||
| EGAF00002550008 | bam | 131.8 GB | ||
| EGAF00002550009 | bam | 128.5 GB | ||
| EGAF00002550010 | bam | 125.7 GB | ||
| EGAF00002550011 | bam | 110.7 GB | ||
| EGAF00002550012 | bam | 112.2 GB | ||
| EGAF00002550013 | bam | 132.2 GB | ||
| EGAF00002550014 | bam | 133.9 GB | ||
| EGAF00002550015 | bam | 129.7 GB | ||
| EGAF00002550016 | bam | 123.5 GB | ||
| EGAF00002550017 | bam | 123.2 GB | ||
| EGAF00002550018 | bam | 67.2 GB | ||
| EGAF00002550019 | bam | 70.0 GB | ||
| EGAF00002550020 | bam | 69.7 GB | ||
| EGAF00002550021 | bam | 127.8 GB | ||
| EGAF00002550022 | bam | 102.8 GB | ||
| EGAF00002550023 | bam | 94.6 GB | ||
| EGAF00002550024 | bam | 68.8 GB | ||
| EGAF00002550025 | bam | 71.6 GB | ||
| EGAF00002550026 | bam | 64.8 GB | ||
| EGAF00002550028 | bam | 66.2 GB | ||
| EGAF00002550029 | bam | 59.5 GB | ||
| EGAF00002550030 | bam | 109.4 GB | ||
| EGAF00002550031 | bam | 68.9 GB | ||
| EGAF00002550032 | bam | 124.7 GB | ||
| EGAF00002550033 | bam | 64.6 GB | ||
| EGAF00002550034 | bam | 89.4 GB | ||
| EGAF00002550035 | bam | 115.8 GB | ||
| EGAF00002550036 | bam | 69.0 GB | ||
| EGAF00002550037 | bam | 68.9 GB | ||
| EGAF00002550038 | bam | 106.9 GB | ||
| EGAF00002550039 | bam | 59.5 GB | ||
| EGAF00002550040 | bam | 91.2 GB | ||
| EGAF00002550042 | bam | 109.3 GB | ||
| EGAF00002550043 | bam | 69.9 GB | ||
| EGAF00002550044 | bam | 65.7 GB | ||
| EGAF00002550045 | bam | 60.1 GB | ||
| EGAF00002550046 | bam | 92.6 GB | ||
| EGAF00002550048 | bam | 69.1 GB | ||
| EGAF00002550049 | bam | 70.2 GB | ||
| EGAF00002550050 | bam | 66.0 GB | ||
| EGAF00002550052 | bam | 88.3 GB | ||
| EGAF00002550054 | bam | 69.4 GB | ||
| EGAF00002550055 | bam | 71.1 GB | ||
| EGAF00002550056 | bam | 66.4 GB | ||
| EGAF00002550057 | bam | 61.4 GB | ||
| EGAF00002550058 | bam | 91.5 GB | ||
| EGAF00002550059 | bam | 112.9 GB | ||
| EGAF00002550060 | bam | 67.9 GB | ||
| EGAF00002550061 | bam | 113.2 GB | ||
| EGAF00002550062 | bam | 58.7 GB | ||
| EGAF00002550063 | bam | 92.9 GB | ||
| EGAF00002550064 | bam | 131.5 GB | ||
| EGAF00002550066 | bam | 142.8 GB | ||
| EGAF00002550067 | bam | 141.1 GB | ||
| EGAF00002550068 | bam | 136.8 GB | ||
| EGAF00002550070 | bam | 138.2 GB | ||
| EGAF00002550071 | bam | 138.7 GB | ||
| EGAF00002550072 | bam | 139.0 GB | ||
| EGAF00002550073 | bam | 138.5 GB | ||
| EGAF00002550076 | bam | 147.6 GB | ||
| EGAF00002550077 | bam | 145.4 GB | ||
| EGAF00002550078 | bam | 146.0 GB | ||
| EGAF00002550079 | bam | 147.3 GB | ||
| EGAF00002550080 | bam | 139.6 GB | ||
| EGAF00002550082 | bam | 67.8 GB | ||
| EGAF00002550083 | bam | 68.0 GB | ||
| EGAF00002550084 | bam | 68.6 GB | ||
| EGAF00002550085 | bam | 68.2 GB | ||
| EGAF00002550086 | bam | 67.3 GB | ||
| EGAF00002550087 | bam | 73.4 GB | ||
| 289 Files (31.6 TB) | ||||