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FASTQ files of the polyA+ (oligo-dT) RNA-Seq dataset from the POPS SGA (Small for Gestational Age) samples and their matched controls.

FASTQ files of the polyA+ (oligo-dT) RNA-Seq dataset from the POPS SGA (Small for Gestational Age) samples and their matched controls. The POP study placental biopsies were collected within 30 minutes of birth and flash frozen in RNAlater (ThermoFisher). For each biopsy, total placental RNA was extracted from approximately 5 mg of tissue using the “mirVana miRNA Isolation Kit” (Ambion) followed by DNase treatment (“DNA-free DNA Removal Kit”, Ambion). RNA quality was assessed with the Agilent Bioanalyzer and all the samples with RIN values ≥ 7.0 were used in the downstream experiments. RNA-libraries were prepared from 1g of total placental RNA with the TruSeq Stranded mRNA Library Prep Kit (Illumina) which captures polyA-tailed transcripts by oligo-dT beads, then pooled and sequenced (single-end, 50bp) using a Single End V4 cluster kit and Illumina HiSeq2500

Request Access

POPS data access policy

You are not authroised to access POPS data unless you have a written permission from the data access committee which you can contact below: D. Stephen Charnock-Jones. Professor of Reproductive Biology. Department of Obstetrics and Gynaecology. University of Cambridge. The Rosie Hospital, Cambridge. CB2 0SW UK email dscj1@cam.ac.uk Tel +44 1223 336875 Fax +44 1223 215327

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00004177078 fq.gz 360.2 MB
EGAF00004177079 fq.gz 340.8 MB
EGAF00004177080 fq.gz 326.8 MB
EGAF00004177081 fq.gz 364.2 MB
EGAF00004177082 fq.gz 261.8 MB
EGAF00004177083 fq.gz 247.3 MB
EGAF00004177084 fq.gz 236.9 MB
EGAF00004177085 fq.gz 264.1 MB
EGAF00004177086 fq.gz 1.2 GB
EGAF00004177087 fq.gz 206.3 MB
EGAF00004177088 fq.gz 194.8 MB
EGAF00004177089 fq.gz 186.3 MB
EGAF00004177090 fq.gz 209.4 MB
EGAF00004177091 fq.gz 1.5 GB
EGAF00004177092 fq.gz 238.0 MB
EGAF00004177093 fq.gz 224.3 MB
EGAF00004177094 fq.gz 214.9 MB
EGAF00004177095 fq.gz 241.3 MB
EGAF00004177096 fq.gz 310.2 MB
EGAF00004177097 fq.gz 293.7 MB
EGAF00004177098 fq.gz 281.4 MB
EGAF00004177099 fq.gz 313.7 MB
EGAF00004177100 fq.gz 697.3 MB
EGAF00004177101 fq.gz 217.9 MB
EGAF00004177102 fq.gz 206.3 MB
EGAF00004177103 fq.gz 197.6 MB
EGAF00004177104 fq.gz 219.6 MB
EGAF00004177105 fq.gz 281.0 MB
EGAF00004177106 fq.gz 265.5 MB
EGAF00004177107 fq.gz 254.6 MB
EGAF00004177108 fq.gz 286.2 MB
EGAF00004177109 fq.gz 1.1 GB
EGAF00004177110 fq.gz 261.0 MB
EGAF00004177111 fq.gz 247.3 MB
EGAF00004177112 fq.gz 237.3 MB
EGAF00004177113 fq.gz 265.8 MB
EGAF00004177114 fq.gz 331.6 MB
EGAF00004177115 fq.gz 314.7 MB
EGAF00004177116 fq.gz 300.0 MB
EGAF00004177117 fq.gz 335.8 MB
EGAF00004177118 fq.gz 415.4 MB
EGAF00004177119 fq.gz 393.4 MB
EGAF00004177120 fq.gz 374.8 MB
EGAF00004177121 fq.gz 420.6 MB
EGAF00004177122 fq.gz 448.2 MB
EGAF00004177123 fq.gz 424.1 MB
EGAF00004177124 fq.gz 404.0 MB
EGAF00004177125 fq.gz 454.7 MB
EGAF00004177126 fq.gz 714.4 MB
EGAF00004177127 fq.gz 250.4 MB
EGAF00004177128 fq.gz 236.7 MB
EGAF00004177129 fq.gz 225.5 MB
EGAF00004177130 fq.gz 253.0 MB
EGAF00004177131 fq.gz 281.2 MB
EGAF00004177132 fq.gz 266.7 MB
EGAF00004177133 fq.gz 254.3 MB
EGAF00004177134 fq.gz 283.4 MB
EGAF00004177135 fq.gz 294.7 MB
EGAF00004177136 fq.gz 279.2 MB
EGAF00004177137 fq.gz 265.8 MB
EGAF00004177138 fq.gz 300.5 MB
EGAF00004177139 fq.gz 256.2 MB
EGAF00004177140 fq.gz 243.2 MB
EGAF00004177141 fq.gz 232.1 MB
EGAF00004177142 fq.gz 261.0 MB
EGAF00004177143 fq.gz 1.1 GB
EGAF00004177144 fq.gz 166.4 MB
EGAF00004177145 fq.gz 169.2 MB
EGAF00004177146 fq.gz 160.7 MB
EGAF00004177147 fq.gz 245.7 MB
EGAF00004177148 fq.gz 766.0 MB
EGAF00004177149 fq.gz 157.2 MB
EGAF00004177150 fq.gz 159.2 MB
EGAF00004177151 fq.gz 151.4 MB
EGAF00004177152 fq.gz 231.0 MB
EGAF00004177153 fq.gz 541.7 MB
EGAF00004177154 fq.gz 113.3 MB
EGAF00004177155 fq.gz 114.7 MB
EGAF00004177156 fq.gz 108.9 MB
EGAF00004177157 fq.gz 167.9 MB
EGAF00004177158 fq.gz 547.7 MB
EGAF00004177159 fq.gz 151.4 MB
EGAF00004177160 fq.gz 153.3 MB
EGAF00004177161 fq.gz 145.6 MB
EGAF00004177162 fq.gz 223.0 MB
EGAF00004177163 fq.gz 653.9 MB
EGAF00004177164 fq.gz 142.8 MB
EGAF00004177165 fq.gz 144.8 MB
EGAF00004177166 fq.gz 137.5 MB
EGAF00004177167 fq.gz 208.3 MB
EGAF00004177168 fq.gz 585.5 MB
EGAF00004177169 fq.gz 162.6 MB
EGAF00004177170 fq.gz 165.5 MB
EGAF00004177171 fq.gz 156.8 MB
EGAF00004177172 fq.gz 239.4 MB
EGAF00004177173 fq.gz 798.0 MB
EGAF00004177174 fq.gz 193.0 MB
EGAF00004177175 fq.gz 195.4 MB
EGAF00004177176 fq.gz 185.6 MB
EGAF00004177177 fq.gz 285.3 MB
EGAF00004177178 fq.gz 907.7 MB
EGAF00004177179 fq.gz 166.0 MB
EGAF00004177180 fq.gz 168.5 MB
EGAF00004177181 fq.gz 160.4 MB
EGAF00004177182 fq.gz 243.0 MB
EGAF00004177183 fq.gz 396.1 MB
EGAF00004177184 fq.gz 374.4 MB
EGAF00004177185 fq.gz 356.7 MB
EGAF00004177186 fq.gz 394.2 MB
EGAF00004177187 fq.gz 349.0 MB
EGAF00004177188 fq.gz 328.9 MB
EGAF00004177189 fq.gz 313.2 MB
EGAF00004177190 fq.gz 346.8 MB
EGAF00004177191 fq.gz 306.3 MB
EGAF00004177192 fq.gz 289.5 MB
EGAF00004177193 fq.gz 275.2 MB
EGAF00004177194 fq.gz 307.3 MB
EGAF00004177195 fq.gz 977.3 MB
EGAF00004177196 fq.gz 256.2 MB
EGAF00004177197 fq.gz 241.6 MB
EGAF00004177198 fq.gz 230.0 MB
EGAF00004177199 fq.gz 256.7 MB
EGAF00004177200 fq.gz 289.9 MB
EGAF00004177201 fq.gz 274.8 MB
EGAF00004177202 fq.gz 262.1 MB
EGAF00004177203 fq.gz 288.2 MB
EGAF00004177204 fq.gz 541.3 MB
EGAF00004177205 fq.gz 512.1 MB
EGAF00004177206 fq.gz 487.3 MB
EGAF00004177207 fq.gz 535.2 MB
EGAF00004177208 fq.gz 555.9 MB
EGAF00004177209 fq.gz 525.5 MB
EGAF00004177210 fq.gz 499.8 MB
EGAF00004177211 fq.gz 558.6 MB
EGAF00004177212 fq.gz 357.2 MB
EGAF00004177213 fq.gz 337.5 MB
EGAF00004177214 fq.gz 321.2 MB
EGAF00004177215 fq.gz 356.7 MB
EGAF00004177216 fq.gz 542.6 MB
EGAF00004177217 fq.gz 542.8 MB
EGAF00004177218 fq.gz 542.4 MB
EGAF00004177219 fq.gz 438.3 MB
EGAF00004177220 fq.gz 438.3 MB
EGAF00004177221 fq.gz 437.6 MB
EGAF00004177222 fq.gz 453.7 MB
EGAF00004177223 fq.gz 284.1 MB
EGAF00004177224 fq.gz 284.1 MB
EGAF00004177225 fq.gz 283.6 MB
EGAF00004177226 fq.gz 543.7 MB
EGAF00004177227 fq.gz 290.0 MB
EGAF00004177228 fq.gz 290.3 MB
EGAF00004177229 fq.gz 289.8 MB
EGAF00004177230 fq.gz 497.8 MB
EGAF00004177231 fq.gz 497.8 MB
EGAF00004177232 fq.gz 497.3 MB
EGAF00004177233 fq.gz 445.7 MB
EGAF00004177234 fq.gz 445.6 MB
EGAF00004177235 fq.gz 445.1 MB
EGAF00004177236 fq.gz 529.2 MB
EGAF00004177237 fq.gz 529.5 MB
EGAF00004177238 fq.gz 528.7 MB
EGAF00004177239 fq.gz 451.2 MB
EGAF00004177240 fq.gz 451.2 MB
EGAF00004177241 fq.gz 450.7 MB
EGAF00004177242 fq.gz 480.3 MB
EGAF00004177243 fq.gz 480.7 MB
EGAF00004177244 fq.gz 479.6 MB
EGAF00004177245 fq.gz 437.3 MB
EGAF00004177246 fq.gz 437.2 MB
EGAF00004177247 fq.gz 436.6 MB
EGAF00004177248 fq.gz 408.4 MB
EGAF00004177249 fq.gz 408.3 MB
EGAF00004177250 fq.gz 408.0 MB
EGAF00004177251 fq.gz 530.0 MB
EGAF00004177252 fq.gz 530.3 MB
EGAF00004177253 fq.gz 529.4 MB
EGAF00004177254 fq.gz 376.0 MB
EGAF00004177255 fq.gz 376.3 MB
EGAF00004177256 fq.gz 375.4 MB
EGAF00004177257 fq.gz 330.1 MB
EGAF00004177258 fq.gz 330.0 MB
EGAF00004177259 fq.gz 329.7 MB
EGAF00004177260 fq.gz 418.8 MB
EGAF00004177261 fq.gz 419.4 MB
EGAF00004177262 fq.gz 418.1 MB
EGAF00004177263 fq.gz 426.4 MB
EGAF00004177264 fq.gz 427.0 MB
EGAF00004177265 fq.gz 426.2 MB
EGAF00004177266 fq.gz 585.9 MB
EGAF00004177267 fq.gz 585.1 MB
EGAF00004177268 fq.gz 584.9 MB
EGAF00004177269 fq.gz 486.5 MB
EGAF00004177270 fq.gz 486.6 MB
EGAF00004177271 fq.gz 485.8 MB
EGAF00004177272 fq.gz 407.1 MB
EGAF00004177273 fq.gz 406.9 MB
EGAF00004177274 fq.gz 406.7 MB
EGAF00004177275 fq.gz 488.6 MB
EGAF00004177276 fq.gz 488.2 MB
EGAF00004177277 fq.gz 487.5 MB
EGAF00004177278 fq.gz 367.5 MB
EGAF00004177279 fq.gz 367.5 MB
EGAF00004177280 fq.gz 367.0 MB
EGAF00004177281 fq.gz 453.1 MB
EGAF00004177282 fq.gz 453.1 MB
EGAF00004177283 fq.gz 452.4 MB
EGAF00004177284 fq.gz 513.0 MB
EGAF00004177285 fq.gz 513.4 MB
EGAF00004177286 fq.gz 512.4 MB
EGAF00004177287 fq.gz 430.0 MB
EGAF00004177288 fq.gz 430.2 MB
EGAF00004177289 fq.gz 429.6 MB
EGAF00004177290 fq.gz 535.3 MB
EGAF00004177291 fq.gz 85.1 MB
EGAF00004177292 fq.gz 85.1 MB
EGAF00004177293 fq.gz 85.9 MB
EGAF00004177294 fq.gz 84.6 MB
EGAF00004177295 fq.gz 85.3 MB
EGAF00004177296 fq.gz 159.2 MB
EGAF00004177297 fq.gz 159.4 MB
EGAF00004177298 fq.gz 159.0 MB
EGAF00004177299 fq.gz 88.8 MB
EGAF00004177300 fq.gz 305.2 MB
EGAF00004177301 fq.gz 54.7 MB
EGAF00004177302 fq.gz 54.6 MB
EGAF00004177303 fq.gz 55.3 MB
EGAF00004177304 fq.gz 54.6 MB
EGAF00004177305 fq.gz 54.9 MB
EGAF00004177306 fq.gz 79.9 MB
EGAF00004177307 fq.gz 80.0 MB
EGAF00004177308 fq.gz 79.8 MB
EGAF00004177309 fq.gz 57.4 MB
EGAF00004177310 fq.gz 449.3 MB
EGAF00004177311 fq.gz 76.2 MB
EGAF00004177312 fq.gz 76.0 MB
EGAF00004177313 fq.gz 76.9 MB
EGAF00004177314 fq.gz 75.7 MB
EGAF00004177315 fq.gz 76.2 MB
EGAF00004177316 fq.gz 128.2 MB
EGAF00004177317 fq.gz 128.2 MB
EGAF00004177318 fq.gz 127.9 MB
EGAF00004177319 fq.gz 79.3 MB
EGAF00004177320 fq.gz 120.0 MB
EGAF00004177321 fq.gz 119.8 MB
EGAF00004177322 fq.gz 121.0 MB
EGAF00004177323 fq.gz 119.5 MB
EGAF00004177324 fq.gz 120.1 MB
EGAF00004177325 fq.gz 212.3 MB
EGAF00004177326 fq.gz 212.6 MB
EGAF00004177327 fq.gz 212.2 MB
EGAF00004177328 fq.gz 125.9 MB
251 Files (84.2 GB)