WGS data of patients diagnosed with NKTL
Whole-genome sequencing (WGS) was performed for 50 pairs of tumor-normal samples from patients diagnosed with NKTL. Genomic DNA from tumor tissue was extracted with QIAamp DNA Mini Kit. The DNA for the matching normal was obtained from blood or buccal swabs and purified by Blood and Cell Culture DNA Mini kit or E.Z.N.A. Tissue DNA Kit (Omega Bio-tek) according to manufacturer’s instructions. The quantity and quality were assessed by Quant-iT PicoGreen dsDNA Assay Kit (Invitrogen) and agarose gel electrophoresis. All sequencing libraries were prepared using TruSeq Nano DNA Library Prep Kit (Illumina). Paired-end sequencing was performed on Illumina HiSeq 2000 or HiSeq X Ten as 2x101 bp or 2x151 bp, respectively.
- 120 samples
- DAC: EGAC00001000640
- Technologies: HiSeq X Ten, Illumina HiSeq 2000
Data access policy for NKTL study. National Cancer Centre Singapore.
Contact corresponding author for data access.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001003828 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00001589934 | fastq.gz | 70.8 GB | ||
| EGAF00001589935 | fastq.gz | 82.2 GB | ||
| EGAF00001589936 | fastq.gz | 69.5 GB | ||
| EGAF00001589937 | fastq.gz | 80.2 GB | ||
| EGAF00001589938 | fastq.gz | 64.1 GB | ||
| EGAF00001589939 | fastq.gz | 63.6 GB | ||
| EGAF00001589940 | fastq.gz | 68.3 GB | ||
| EGAF00001589941 | fastq.gz | 68.7 GB | ||
| EGAF00001589942 | fastq.gz | 64.9 GB | ||
| EGAF00001589943 | fastq.gz | 64.5 GB | ||
| EGAF00001589944 | fastq.gz | 64.5 GB | ||
| EGAF00001589945 | fastq.gz | 64.1 GB | ||
| EGAF00001589946 | fastq.gz | 27.9 GB | ||
| EGAF00001589947 | fastq.gz | 32.4 GB | ||
| EGAF00001589948 | fastq.gz | 84.9 GB | ||
| EGAF00001589949 | fastq.gz | 98.0 GB | ||
| EGAF00001589950 | fastq.gz | 30.7 GB | ||
| EGAF00001589951 | fastq.gz | 35.4 GB | ||
| EGAF00001589952 | fastq.gz | 63.2 GB | ||
| EGAF00001589953 | fastq.gz | 72.6 GB | ||
| EGAF00001589954 | fastq.gz | 39.3 GB | ||
| EGAF00001589955 | fastq.gz | 45.7 GB | ||
| EGAF00001589956 | fastq.gz | 36.1 GB | ||
| EGAF00001589957 | fastq.gz | 41.7 GB | ||
| EGAF00001589958 | fastq.gz | 46.8 GB | ||
| EGAF00001589959 | fastq.gz | 50.3 GB | ||
| EGAF00001589960 | fastq.gz | 43.5 GB | ||
| EGAF00001589961 | fastq.gz | 45.6 GB | ||
| EGAF00001589962 | fastq.gz | 33.2 GB | ||
| EGAF00001589963 | fastq.gz | 36.8 GB | ||
| EGAF00001589964 | fastq.gz | 31.8 GB | ||
| EGAF00001589965 | fastq.gz | 35.4 GB | ||
| EGAF00001589966 | fastq.gz | 30.6 GB | ||
| EGAF00001589967 | fastq.gz | 33.9 GB | ||
| EGAF00001589968 | fastq.gz | 31.2 GB | ||
| EGAF00001589969 | fastq.gz | 34.6 GB | ||
| EGAF00001589970 | fastq.gz | 43.0 GB | ||
| EGAF00001589971 | fastq.gz | 48.0 GB | ||
| EGAF00001589972 | fastq.gz | 45.2 GB | ||
| EGAF00001589973 | fastq.gz | 49.7 GB | ||
| EGAF00001589974 | fastq.gz | 48.7 GB | ||
| EGAF00001589975 | fastq.gz | 51.5 GB | ||
| EGAF00001589976 | fastq.gz | 44.6 GB | ||
| EGAF00001589977 | fastq.gz | 48.7 GB | ||
| EGAF00001589978 | fastq.gz | 30.7 GB | ||
| EGAF00001589979 | fastq.gz | 35.9 GB | ||
| EGAF00001589980 | fastq.gz | 67.3 GB | ||
| EGAF00001589981 | fastq.gz | 78.1 GB | ||
| EGAF00001589982 | fastq.gz | 29.8 GB | ||
| EGAF00001589983 | fastq.gz | 34.5 GB | ||
| EGAF00001589984 | fastq.gz | 59.2 GB | ||
| EGAF00001589985 | fastq.gz | 66.5 GB | ||
| EGAF00001589986 | fastq.gz | 32.8 GB | ||
| EGAF00001589987 | fastq.gz | 37.9 GB | ||
| EGAF00001589988 | fastq.gz | 64.6 GB | ||
| EGAF00001589989 | fastq.gz | 72.8 GB | ||
| EGAF00001589990 | fastq.gz | 72.6 GB | ||
| EGAF00001589991 | fastq.gz | 81.3 GB | ||
| EGAF00001589992 | fastq.gz | 69.8 GB | ||
| EGAF00001589993 | fastq.gz | 80.1 GB | ||
| EGAF00001589994 | fastq.gz | 34.6 GB | ||
| EGAF00001589995 | fastq.gz | 40.3 GB | ||
| EGAF00001589996 | fastq.gz | 60.4 GB | ||
| EGAF00001589997 | fastq.gz | 69.6 GB | ||
| EGAF00001589998 | fastq.gz | 32.3 GB | ||
| EGAF00001589999 | fastq.gz | 36.9 GB | ||
| EGAF00001590000 | fastq.gz | 78.9 GB | ||
| EGAF00001590001 | fastq.gz | 88.7 GB | ||
| EGAF00001590002 | fastq.gz | 32.4 GB | ||
| EGAF00001590003 | fastq.gz | 37.0 GB | ||
| EGAF00001590004 | fastq.gz | 62.7 GB | ||
| EGAF00001590005 | fastq.gz | 70.2 GB | ||
| EGAF00001590006 | fastq.gz | 33.5 GB | ||
| EGAF00001590007 | fastq.gz | 38.2 GB | ||
| EGAF00001590008 | fastq.gz | 55.6 GB | ||
| EGAF00001590009 | fastq.gz | 64.7 GB | ||
| EGAF00001590010 | fastq.gz | 31.6 GB | ||
| EGAF00001590011 | fastq.gz | 35.7 GB | ||
| EGAF00001590012 | fastq.gz | 80.5 GB | ||
| EGAF00001590013 | fastq.gz | 90.4 GB | ||
| EGAF00001590014 | fastq.gz | 30.5 GB | ||
| EGAF00001590015 | fastq.gz | 34.6 GB | ||
| EGAF00001590016 | fastq.gz | 62.3 GB | ||
| EGAF00001590017 | fastq.gz | 70.0 GB | ||
| EGAF00001590018 | fastq.gz | 49.2 GB | ||
| EGAF00001590019 | fastq.gz | 59.5 GB | ||
| EGAF00001590020 | fastq.gz | 60.9 GB | ||
| EGAF00001590021 | fastq.gz | 69.2 GB | ||
| EGAF00001590022 | fastq.gz | 33.2 GB | ||
| EGAF00001590023 | fastq.gz | 38.8 GB | ||
| EGAF00001590024 | fastq.gz | 61.9 GB | ||
| EGAF00001590025 | fastq.gz | 71.6 GB | ||
| EGAF00001590026 | fastq.gz | 32.0 GB | ||
| EGAF00001590027 | fastq.gz | 37.6 GB | ||
| EGAF00001590028 | fastq.gz | 62.3 GB | ||
| EGAF00001590029 | fastq.gz | 71.9 GB | ||
| EGAF00001590030 | fastq.gz | 29.9 GB | ||
| EGAF00001590031 | fastq.gz | 34.9 GB | ||
| EGAF00001590032 | fastq.gz | 61.4 GB | ||
| EGAF00001590033 | fastq.gz | 70.6 GB | ||
| EGAF00001590034 | fastq.gz | 30.3 GB | ||
| EGAF00001590035 | fastq.gz | 35.2 GB | ||
| EGAF00001590036 | fastq.gz | 66.2 GB | ||
| EGAF00001590037 | fastq.gz | 76.9 GB | ||
| EGAF00002010819 | fastq.gz | 34.1 GB | ||
| EGAF00002010820 | fastq.gz | 37.7 GB | ||
| EGAF00002010821 | fastq.gz | 33.7 GB | ||
| EGAF00002010822 | fastq.gz | 37.4 GB | ||
| EGAF00002010825 | fastq.gz | 28.5 GB | ||
| EGAF00002010826 | fastq.gz | 34.5 GB | ||
| EGAF00002010827 | fastq.gz | 33.7 GB | ||
| EGAF00002010828 | fastq.gz | 40.1 GB | ||
| EGAF00002010829 | fastq.gz | 33.3 GB | ||
| EGAF00002010830 | fastq.gz | 40.4 GB | ||
| EGAF00002010831 | fastq.gz | 21.5 GB | ||
| EGAF00002010832 | fastq.gz | 24.2 GB | ||
| EGAF00002010833 | fastq.gz | 33.6 GB | ||
| EGAF00002010834 | fastq.gz | 40.9 GB | ||
| EGAF00002010835 | fastq.gz | 34.2 GB | ||
| EGAF00002010836 | fastq.gz | 40.1 GB | ||
| EGAF00002010837 | fastq.gz | 59.4 GB | ||
| EGAF00002010838 | fastq.gz | 71.2 GB | ||
| EGAF00002010839 | fastq.gz | 61.3 GB | ||
| EGAF00002010840 | fastq.gz | 74.7 GB | ||
| EGAF00002010843 | fastq.gz | 63.1 GB | ||
| EGAF00002010844 | fastq.gz | 77.1 GB | ||
| EGAF00002010845 | fastq.gz | 60.7 GB | ||
| EGAF00002010846 | fastq.gz | 73.1 GB | ||
| EGAF00002010847 | fastq.gz | 63.3 GB | ||
| EGAF00002010848 | fastq.gz | 76.1 GB | ||
| EGAF00002010849 | fastq.gz | 62.6 GB | ||
| EGAF00002010850 | fastq.gz | 74.4 GB | ||
| EGAF00002010851 | fastq.gz | 61.2 GB | ||
| EGAF00002010852 | fastq.gz | 72.1 GB | ||
| EGAF00002010853 | fastq.gz | 64.5 GB | ||
| EGAF00002010854 | fastq.gz | 77.5 GB | ||
| EGAF00002015424 | fastq.gz | 60.6 GB | ||
| EGAF00002015425 | fastq.gz | 71.2 GB | ||
| EGAF00002015436 | fastq.gz | 61.1 GB | ||
| EGAF00002015437 | fastq.gz | 70.6 GB | ||
| EGAF00002548963 | fastq.gz | 23.4 GB | ||
| EGAF00002548964 | fastq.gz | 24.7 GB | ||
| EGAF00002548965 | fastq.gz | 63.9 GB | ||
| EGAF00002548966 | fastq.gz | 67.3 GB | ||
| EGAF00002548967 | fastq.gz | 33.4 GB | ||
| EGAF00002548968 | fastq.gz | 35.9 GB | ||
| EGAF00002548969 | fastq.gz | 58.4 GB | ||
| EGAF00002548970 | fastq.gz | 59.9 GB | ||
| EGAF00002548971 | fastq.gz | 30.5 GB | ||
| EGAF00002548972 | fastq.gz | 33.4 GB | ||
| EGAF00002548973 | fastq.gz | 74.3 GB | ||
| EGAF00002548974 | fastq.gz | 76.2 GB | ||
| EGAF00002548979 | fastq.gz | 36.6 GB | ||
| EGAF00002548980 | fastq.gz | 38.6 GB | ||
| EGAF00002548981 | fastq.gz | 72.0 GB | ||
| EGAF00002548982 | fastq.gz | 76.1 GB | ||
| EGAF00002548987 | fastq.gz | 31.1 GB | ||
| EGAF00002548988 | fastq.gz | 34.2 GB | ||
| EGAF00002548989 | fastq.gz | 58.1 GB | ||
| EGAF00002548990 | fastq.gz | 62.8 GB | ||
| EGAF00002548991 | fastq.gz | 34.2 GB | ||
| EGAF00002548992 | fastq.gz | 35.9 GB | ||
| EGAF00002548993 | fastq.gz | 65.9 GB | ||
| EGAF00002548994 | fastq.gz | 69.4 GB | ||
| EGAF00002548995 | fastq.gz | 27.8 GB | ||
| EGAF00002548996 | fastq.gz | 29.0 GB | ||
| EGAF00002548997 | fastq.gz | 63.2 GB | ||
| EGAF00002548998 | fastq.gz | 66.4 GB | ||
| EGAF00002548999 | fastq.gz | 47.8 GB | ||
| EGAF00002549000 | fastq.gz | 50.2 GB | ||
| EGAF00002549001 | fastq.gz | 70.0 GB | ||
| EGAF00002549002 | fastq.gz | 74.2 GB | ||
| EGAF00002549003 | fastq.gz | 37.5 GB | ||
| EGAF00002549004 | fastq.gz | 40.7 GB | ||
| EGAF00002549005 | fastq.gz | 77.6 GB | ||
| EGAF00002549006 | fastq.gz | 82.3 GB | ||
| EGAF00002549011 | fastq.gz | 34.4 GB | ||
| EGAF00002549012 | fastq.gz | 36.1 GB | ||
| EGAF00002549013 | fastq.gz | 56.1 GB | ||
| EGAF00002549014 | fastq.gz | 59.8 GB | ||
| EGAF00002549015 | fastq.gz | 36.9 GB | ||
| EGAF00002549016 | fastq.gz | 38.2 GB | ||
| EGAF00002549017 | fastq.gz | 62.7 GB | ||
| EGAF00002549018 | fastq.gz | 65.8 GB | ||
| EGAF00002549019 | fastq.gz | 41.7 GB | ||
| EGAF00002549020 | fastq.gz | 43.5 GB | ||
| EGAF00002549021 | fastq.gz | 58.5 GB | ||
| EGAF00002549022 | fastq.gz | 61.3 GB | ||
| EGAF00002549023 | fastq.gz | 35.3 GB | ||
| EGAF00002549024 | fastq.gz | 37.4 GB | ||
| EGAF00002549025 | fastq.gz | 75.5 GB | ||
| EGAF00002549026 | fastq.gz | 79.5 GB | ||
| EGAF00002549027 | fastq.gz | 34.0 GB | ||
| EGAF00002549028 | fastq.gz | 36.6 GB | ||
| EGAF00002549029 | fastq.gz | 62.1 GB | ||
| EGAF00002549030 | fastq.gz | 64.1 GB | ||
| EGAF00002549031 | fastq.gz | 34.3 GB | ||
| EGAF00002549032 | fastq.gz | 37.8 GB | ||
| EGAF00002549033 | fastq.gz | 66.2 GB | ||
| EGAF00002549034 | fastq.gz | 71.8 GB | ||
| EGAF00002549035 | fastq.gz | 36.7 GB | ||
| EGAF00002549036 | fastq.gz | 40.2 GB | ||
| EGAF00002549037 | fastq.gz | 63.7 GB | ||
| EGAF00002549038 | fastq.gz | 67.4 GB | ||
| EGAF00007134864 | fastq.gz | 29.0 GB | ||
| EGAF00007134865 | fastq.gz | 30.0 GB | ||
| EGAF00007134866 | fastq.gz | 26.4 GB | ||
| EGAF00007134867 | fastq.gz | 26.6 GB | ||
| EGAF00007134868 | fastq.gz | 55.7 GB | ||
| EGAF00007134869 | fastq.gz | 57.5 GB | ||
| EGAF00007134870 | fastq.gz | 52.9 GB | ||
| EGAF00007134871 | fastq.gz | 54.1 GB | ||
| 212 Files (11.0 TB) | ||||