Genomic, epigenomic and transcriptomic profiling of GCTB
This dataset contains primary raw data of whole-genome sequencing, whole-genome bisulfite sequencing, ATAC-seq, ChIP-seq (ChIP-mentation) of histone variants and modifications, as well as RNA-seq of giant cell tumor of bone tissue and primary cell line samples.
- 29 samples
- DAC: EGAC00001000279
- Technologies: HiSeq X Ten, Illumina HiSeq 2000
- DS DUO:0000007 (version: 2019-01-07)disease specific researchThis data use permission indicates that use is allowed provided it is related to the specified disease.ModifiersMONDO:0005674
- RS DUO:0000012 (version: 2019-01-07)research specific restrictionsThis data use modifier indicates that use is limited to studies of a certain research type.
- RU DUO:0000014 (version: 2019-01-07)research use onlyThis data use limitation indicates that use is limited to research purposes (e.g., does not include its use in clinical care).
- IRB DUO:0000021 (version: 2019-01-07)ethics approval requiredThis data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.
DKFZ-Epigenomics-Data-Transfer-Agreement
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00002528689 | fastq.gz | 23.2 GB | ||
| EGAF00002528691 | fastq.gz | 19.9 GB | ||
| EGAF00002528695 | fastq.gz | 20.1 GB | ||
| EGAF00002528809 | fastq.gz | 43.3 GB | ||
| EGAF00002528823 | fastq.gz | 45.2 GB | ||
| 5 Files (151.6 GB) | ||||