Genomic, epigenomic and transcriptomic profiling of GCTB
This dataset contains primary raw data of whole-genome sequencing, whole-genome bisulfite sequencing, ATAC-seq, ChIP-seq (ChIP-mentation) of histone variants and modifications, as well as RNA-seq of giant cell tumor of bone tissue and primary cell line samples.
- 29 samples
- DAC: EGAC00001000279
- Technologies: HiSeq X Ten, Illumina HiSeq 2000
DUO:0000007 version: 2019-01-07
disease specific research
This data use permission indicates that use is allowed provided it is related to the specified disease.
ModifiersMONDO:0005674
DUO:0000012 version: 2019-01-07
research specific restrictions
This data use modifier indicates that use is limited to studies of a certain research type.
DUO:0000014 version: 2019-01-07
research use only
This data use limitation indicates that use is limited to research purposes (e.g., does not include its use in clinical care).
DUO:0000021 version: 2019-01-07
ethics approval required
This data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.
DKFZ-Epigenomics-Data-Transfer-Agreement
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001003730 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
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| EGAF00002528689 | fastq.gz | 23.2 GB |
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| EGAF00002528691 | fastq.gz | 19.9 GB |
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| EGAF00002528695 | fastq.gz | 20.1 GB |
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| EGAF00002528809 | fastq.gz | 43.3 GB |
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| EGAF00002528823 | fastq.gz | 45.2 GB |
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| 5 Files (151.6 GB) | ||||