Data access committee for genomic and clinical data produced by the Institute for Biomedical Technology.

matti.nykter@uta.fi

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Dataset ID	Description	Technology	Samples
EGAD00001000609	Whole transcriptome sequencing of 28 untreated prostate cancers, 13 castration resistant prostate cancers, and 12 benign prostatic hyperplasias.	Illumina HiSeq 2000	53
EGAD00001000610	Methylated DNA immunoprecipitation sequencing of 28 untreated prostate cancers, 11 castration resistant prostate cancers, and 12 benign prostatic hyperplasias.	Illumina HiSeq 2000	51
EGAD00001000611	Small RNA sequencing of 28 untreated prostate cancers, 12 castration resistant prostate cancers, and 3 benign prostatic hyperplasias.	Illumina HiSeq 2000	43
EGAD00001000612	Low coverage whole genome sequencing of 27 untreated prostate cancers, 9 castration resistant prostate cancers, and 4 benign prostatic hyperplasias.	Illumina HiSeq 2000	40
EGAD00001007921	Two sections of cryopreserved prostate cancer tissue from one untreated prostate cancer patient were profiled for spatial transcriptomics using the Visium Spatial library preparation protocol from 10x Genomics. The GRCh38 aligned sequencing reads from the two prostate cancer tissue sections are provided as BAM files.	Illumina NovaSeq 6000	2