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Anal SCC cell line and parent tumour comparative whole exome sequencing

1) To perform whole exome sequencing on a panel of five human anal squamous cell carcinoma lines and their respective parent tumours. 2) To perform a comparative analysis between the lines and their parent tumours. 3) Specifically assess the somatic nucleotide variants, copy number variants, mutational burden and mutational signatures.

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
EGAD00001007001 Illumina NovaSeq 6000 13
Publications Citations
Molecular and genomic characterisation of a panel of human anal cancer cell lines.
Cell Death Dis 12: 2021 959
3