MicroRNA profiling by next-generation sequencing for colorectal cancer screening

The study was conducted as the marker discovery phase to identify potential microRNA (miRNA) candidates for colorectal cancer (CRC) screening. Genome-wide profiling with next-generation sequencing (NGS) was performed using plasma samples from 20 newly diagnosed CRC cases and 20 controls free of colorectal neoplasms matched by age and sex.

Type: Other
Archiver: European Genome-Phenome Archive (EGA)

1 Dataset 1 Publication

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD00001006966	The dataset contains raw miRNA sequencing data of plasma samples from 20 newly diagnosed colorectal cancer cases and 20 controls free of colorectal neoplasms matched by age and sex. It includes files in the FASTQ compressed (.gz) format.	NextSeq 500	40

Publications	Citations
A microRNA panel compared to environmental and polygenic scores for colorectal cancer risk prediction. Raut JR, Schöttker B, Holleczek B, Guo F, Bhardwaj M, Miah K, Schrotz-King P, Brenner H. Nat Commun 12: 2021 4811	21