MutationalPatterns2: The one stop shop for the analysis of mutational processes: DNA repair deletions

1 Dataset 1 Publication

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD00001006777	We generated HPRT-only knockout lines as well as the combination of HPRT with MSH2, UNG and XPC. Whole genome sequencing was performed on generated clones and subclones. By subtracting variants present in the clones from those in the subclones, the somatic mutations, that accumulated in between the clonal steps, were determined.	HiSeq X Ten Illumina NovaSeq 6000	11

Publications	Citations
MutationalPatterns: the one stop shop for the analysis of mutational processes. Manders F, Brandsma AM, de Kanter J, Verheul M, Oka R, van Roosmalen MJ, van der Roest B, van Hoeck A, Cuppen E, van Boxtel R. BMC Genomics 23: 2022 134	54