Neuroblastoma tumor heterogeneity and cell plasticity (from PDX and cell lines)
Two cell identities, noradrenergic and mesenchymal, have been characterized in neuroblastoma cell lines according to their epigenetic landscapes relying on specific core regulatory circuitries of transcription factors. Yet, their relationship and relative contribution in patient tumors remain to be defined. Here, we document a spontaneous plasticity between the noradrenergic and mesenchymal identities in a subset of cell lines. Strikingly, mesenchymal neuroblastoma cells revert to a noradrenergic phenotype in vivo. Consistently, tumor cells with a mesenchymal identity are detected in single-cell transcriptomic analyses of neuroblastoma tumors and PDX models. Our data also highlight neuroblastoma intra-tumor heterogeneity with the co-existence of distinct tumor populations, including sympathoblast-like and chromaffin-like cells suggesting that neuroblastoma cells arise from a common sympatho-adrenal progenitor.
- Type: Other
- Archiver: European Genome-Phenome Archive (EGA)
Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data
Dataset ID | Description | Technology | Samples |
---|---|---|---|
EGAD00001006557 | Illumina NovaSeq 6000 | 4 | |
EGAD00001006558 | Illumina NovaSeq 6000 | 114 | |
EGAD00001007870 | Illumina NovaSeq 6000 | 24 |
Publications | Citations |
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Single-cell transcriptomics reveals shared immunosuppressive landscapes of mouse and human neuroblastoma.
J Immunother Cancer 10: 2022 e004807 |
15 |
Reversible transitions between noradrenergic and mesenchymal tumor identities define cell plasticity in neuroblastoma.
Nat Commun 14: 2023 2575 |
15 |