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Genomic and epigenomic insights into the origin, pathogenesis and clinical behavior of mantle cell lymphoma subtypes

Mantle Cell Lymphoma can be subdivided into conventional (cMCL) and leukemic non-nodal MCL (nnMCL), which differ in the cell of origin, gene expression, biological characteristics and clinical evolution. Using genomic, epigenomic and transcriptomic data we identified common and particular alterations in the two subtypes, either point mutations, copy number alterations or structural variants some of them with prognostic impact.

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
EGAD00001006025 Illumina MiSeq 114
EGAD00010001841 Affymetrix 6.0; Cytoscan 153
EGAD00010001842 Human Genome U219 array plate 44
EGAD00010001877 Infinium MethylationEPIC BeadChip 70
Publications Citations
Genomic and epigenomic insights into the origin, pathogenesis, and clinical behavior of mantle cell lymphoma subtypes.
Blood 136: 2020 1419-1432
154
IgCaller for reconstructing immunoglobulin gene rearrangements and oncogenic translocations from whole-genome sequencing in lymphoid neoplasms.
Nat Commun 11: 2020 3390
31
The proliferative history shapes the DNA methylome of B-cell tumors and predicts clinical outcome.
Nat Cancer 1: 2020 1066-1081
70
PanCancer analysis of somatic mutations in repetitive regions reveals recurrent mutations in snRNA U2.
NPJ Genom Med 7: 2022 19
15
Tumorigenic role of Musashi-2 in aggressive mantle cell lymphoma.
Leukemia 37: 2023 408-421
9
SOX11/PRDX2 axis modulates redox homeostasis and chemoresistance in aggressive mantle cell lymphoma.
Sci Rep 14: 2024 7863
4
The biological and clinical impact of deletions before and after large chromosomal gains in multiple myeloma.
Blood 144: 2024 771-783
9
The SOX11:SMARCA4 complex is a driver of oncogenic transcriptional programs in mantle cell lymphoma.
Blood Cancer J 15: 2025 127
0
Fluctuating DNA methylation tracks cancer evolution at clinical scale.
Nature 645: 2025 764-773
0