Analysis of translatome, truncating mutations, lncRNA, circRNA and microproteins of 80 human DCM cases and controls
The regulation of gene expression in healthy and diseased human tissues is incompletely understood and has primarily been studied on the transcriptional level. Here, we quantify the impact of translation on gene expression and annotate novel translational events in 80 human hearts. These include 65 tissues from patients with dilated cardiomyopathy (DCM) - the most common cause of heart transplantation – and 15 unaffected controls. We show that translational regulation modulates disease-associated molecular processes. Further, we evaluate ribosome dynamics at protein truncating variants revealing incomplete termination of translation at titin-truncating variants (TTNtv) that commonly cause DCM. Finally, we identify dozens of unknown microproteins translated from lncRNAs and circRNAs and link these to mitochondrial processes. Several microproteins are expressed from lncRNAs with previously demonstrated function, suggesting a dual coding and noncoding role. This resource will stimulate novel functional investigations into cardiac biology in health and disease and may serve as a blueprint for characterizing the translational landscape of other human tissues.
- Type: Other
- Archiver: European Genome-Phenome Archive (EGA)
Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data
Dataset ID | Description | Technology | Samples |
---|---|---|---|
EGAD00001004394 | Illumina HiSeq 2500 Illumina HiSeq 4000 | 80 |
Publications | Citations |
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The Translational Landscape of the Human Heart.
Cell 178: 2019 242-260.e29 |
293 |
Multifunctional RNA-binding proteins influence mRNA abundance and translational efficiency of distinct sets of target genes.
PLoS Comput Biol 17: 2021 e1009658 |
19 |
Screening of Lipid Metabolism-Related Gene Diagnostic Signature for Patients With Dilated Cardiomyopathy.
Front Cardiovasc Med 9: 2022 853468 |
7 |
Evolutionary origins and interactomes of human, young microproteins and small peptides translated from short open reading frames.
Mol Cell 83: 2023 994-1011.e18 |
40 |
Evolution of translational control and the emergence of genes and open reading frames in human and non-human primate hearts.
Nat Cardiovasc Res 3: 2024 1217-1235 |
0 |