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Capture Hi-C on MM

In situ promoter capture Hi-C on multiple myeloma cell line KMS11 in experimental triplicates. Hi-C libraries were prepared as previously described (Rao et al., 2014, http://dx.doi.org/10.1016/j.cell.2014.11.021). Promoter capture was based on 32,313 biotinylated 120-mer RNA baits (Agilent). Hi-C libraries were sequenced using Illumina HiSeq 2000 technology. The files are in FASTQ format.

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
EGAD00001003597 Illumina HiSeq 2000 1
Publications Citations
Identification of multiple risk loci and regulatory mechanisms influencing susceptibility to multiple myeloma.
Nat Commun 9: 2018 3707
61
Functional dissection of inherited non-coding variation influencing multiple myeloma risk.
Nat Commun 13: 2022 151
18
Algorithmic considerations when analysing capture Hi-C data.
Wellcome Open Res 5: 2020 289
4