The aim of this project is to identify, on 15 French Caucasian and 10 African-Caribbean men, through an integrative approach of DNA sequencing and transciptomic analyses, relevant genomic events that characterize or allow targeting the various phenotypes of aggressiveness of early stages of prostate cancer.

Every year about 70,000 new cases of prostate cancer are diagnosed in France and 8,700 men died from this disease. But the incidence and the rate of mortality per 100,000 men in the French West Indies are respectively 1.5x and 2x upper than the rates observed in the metropolitan France. The aim of this project is to identify, on 15 French Caucasian and 10 African-Caribbean men, through an integrative approach of DNA sequencing and transciptomic analyses, relevant genomic events that characterize or allow targeting the various phenotypes of aggressiveness of early stages of prostate cancer.

Type: Other
Archiver: European Genome-Phenome Archive (EGA)

6 Datasets

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD00001003115	Whole genome sequencing data of 15 French Caucasian and 10 African-Caribbean men with prostate Cancer.	Illumina HiSeq 2000	50
EGAD00001003306	Exome sequencing data of 15 French Caucasian and 10 African-Caribbean men with prostate Cancer.	Illumina HiSeq 2000	50
EGAD00001003344	Transcriptome profiling of 25 prostate tumor samples by RNA-Seq	Illumina HiSeq 2000	25
EGAD00001003835	Whole genome sequencing data of 25 prostate tumor and corresponding normal samples, aligned with the CGP BWA-mem workflow.	Illumina HiSeq 2000	50
EGAD00010001280	Transcriptome array dataset	Affymetrix HG_U133_+2	25
EGAD00010001281	SNP array dataset	HUMANOMNIEXPRESS	50