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Breast Cancer PDTX Encyclopaedia

Molecular data from the collection of PDTX breast cancer models described in Bruna et al, 2016. Cell. It includes whole exome sequencing, shallow whole genome sequencing, expression arrays and reduced bisulfite representation sequencing (RRBS).

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
EGAD00001002685 Illumina HiSeq 2500 393
EGAD00001006307 Illumina HiSeq 4000 117
EGAD00010001032 Illlumina HT12 v3 153
Publications Citations
A Biobank of Breast Cancer Explants with Preserved Intra-tumor Heterogeneity to Screen Anticancer Compounds.
Cell 167: 2016 260-274.e22
249
Landscapes of cellular phenotypic diversity in breast cancer xenografts and their impact on drug response.
Nat Commun 12: 2021 1998
21