ICGC Oesophageal adenocarcinoma - 100 tumour samples
The oesophageal project will focus on adenocarcinoma which is increasing in incidence in the UK and other developed countries and has a very poor outcome. The primary aims of this project are to deeply sequence tumour and normal genomic DNA (including the precursor condition Barrett’s oesophagus when material is available) to provide a comprehensive catalogue of somatic mutations. This will be achieved through a UK-wide network of hospitals involved in a research collaboration called the OCCAMS consortium. The goal of this project is to use high quality clinical material with accurately annotated clinic-pathological, treatment and outcome data.
- Type: Other
- Archiver: European Genome-Phenome Archive (EGA)
Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data
Dataset ID | Description | Technology | Samples |
---|---|---|---|
EGAD00001001048 | Illumina HiSeq 2000 | - | |
EGAD00001001071 | Illumina HiSeq 2000 | 10 | |
EGAD00001001394 | Illumina HiSeq 2000 | - | |
EGAD00001001457 | Illumina HiSeq 2000 | 24 | |
EGAD00001001960 | Illumina HiSeq 2000 | - | |
EGAD00001002218 | Illumina HiSeq 2000 | 10 | |
EGAD00001002241 | Illumina HiSeq 2000 | 6 | |
EGAD00001002689 | Illumina HiSeq 2000 | - | |
EGAD00001003292 | Illumina HiSeq 2000 | 34 | |
EGAD00001003580 | Illumina HiSeq 2000 | 38 | |
EGAD00001004137 | Illumina HiSeq 2000 | - | |
EGAD00001004417 | Illumina HiSeq 2000 | - | |
EGAD00001004775 | Illumina HiSeq 2000 | - | |
EGAD00001005434 | Illumina HiSeq 2000 | - | |
EGAD00001007493 | HiSeq X Five Illumina HiSeq 2000 Illumina NovaSeq 6000 | 8 | |
EGAD00001007496 | HiSeq X Five Illumina HiSeq 2000 | - | |
EGAD00001007785 | HiSeq X Five Illumina HiSeq 2000 Illumina NovaSeq 6000 | - | |
EGAD00001007808 | Illumina HiSeq 2000 | - | |
EGAD00001011095 | HiSeq X Five Illumina HiSeq 2000 | - | |
EGAD00001011187 | HiSeq X Five Illumina HiSeq 2000 Illumina NovaSeq 6000 unspecified | 63 | |
EGAD00001011191 | HiSeq X Five Illumina HiSeq 2000 Illumina NovaSeq 6000 unspecified | 42 | |
EGAD00001011196 | HiSeq X Five Illumina HiSeq 2000 Illumina NovaSeq 6000 unspecified | 6 |