HipSci-RNAseq-healthy volunteers
The HipSci project brings together diverse constituents in genomics, proteomics, cell biology and clinical genetics to create a UK national iPS cell resource and use it to carry out cellular genetic studies. In this sup-study we perform RNAseq on iPS cells generated from skin biopsies from healthy volunteers.
- Type: Transcriptome Analysis
- Archiver: European Genome-Phenome Archive (EGA)
Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data
| Dataset ID | Description | Technology | Samples |
|---|---|---|---|
| EGAD00001000897 | Illumina HiSeq 2000 | 22 | |
| EGAD00001001438 | Illumina HiSeq 2000 | 116 | |
| EGAD00001001933 | Illumina HiSeq 2000 | 118 | |
| EGAD00001003529 | Illumina HiSeq 2000 Illumina HiSeq 2500 | 118 |
| Publications | Citations |
|---|---|
|
Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression.
Nat Commun 11: 2020 810 |
126 |
|
Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation.
Nat Genet 53: 2021 304-312 |
109 |
|
Optimizing expression quantitative trait locus mapping workflows for single-cell studies.
Genome Biol 22: 2021 188 |
32 |
|
Cell reprogramming shapes the mitochondrial DNA landscape.
Nat Commun 12: 2021 5241 |
16 |
|
A compendium of uniformly processed human gene expression and splicing quantitative trait loci.
Nat Genet 53: 2021 1290-1299 |
171 |