Whole genome sequencing, SNP array and RNA-seq of uveal melanomas

We conducted whole genome sequencing and DNA SNP array of 12 uveal melanoma genomes and their matched DNA from blood. We also conducted RNA-seq of the 12 tumour samples.

Type: Other
Archiver: European Genome-Phenome Archive (EGA)

2 Datasets 1 Publication

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD00001000372	We conducted whole genome sequencing and DNA SNP array of 12 uveal melanoma genomes and their matched DNA from blood. We also conducted RNA-seq of the 12 tumour samples.	Illumina HiSeq 2000	24
EGAD00010000468	Uveal melanoma matched Tumour and blood samples	Illumina HumanOmni2.5	24

Publications	Citations
SF3B1 mutations are associated with alternative splicing in uveal melanoma. Furney SJ, Pedersen M, Gentien D, Dumont AG, Rapinat A, Desjardins L, Turajlic S, Piperno-Neumann S, de la Grange P, Roman-Roman S, Stern MH, Marais R. Cancer Discov 3: 2013 1122-1129	255