20_Matched_Pair_Breast_Cancer_Genomes
We propose to definitively characterise the somatic genetics of 20 breast cancers through generation of comprehensive catalogues of somatic mutations by high coverage genome sequencing coupled with integrated transcriptomic data.
- Type: Cancer Genomics
- Archiver: European Genome-Phenome Archive (EGA)
Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data
Dataset ID | Description | Technology | Samples |
---|---|---|---|
EGAD00001000082 | Illumina Genome Analyzer II Illumina HiSeq 2000 | 42 | |
EGAD00001000138 | Illumina Genome Analyzer II Illumina HiSeq 2000 | 58 | |
EGAD00001001335 | Illumina Genome Analyzer II Illumina HiSeq 2000 | 28 | |
EGAD00001001338 | Illumina Genome Analyzer II Illumina HiSeq 2000 | 49 | |
EGAD00001002237 | Illumina Genome Analyzer II Illumina HiSeq 2000 | 59 | |
EGAD00001002696 | HiSeq X Ten Illumina HiSeq 2000 | 58 |
Publications | Citations |
---|---|
Genomic Evolution of Breast Cancer Metastasis and Relapse.
Cancer Cell 32: 2017 169-184.e7 |
358 |
Integrative reconstruction of cancer genome karyotypes using InfoGenomeR.
Nat Commun 12: 2021 2467 |
4 |
A Cluster-Based Approach for the Discovery of Copy Number Variations From Next-Generation Sequencing Data.
Front Genet 12: 2021 699510 |
0 |
Spatial genomics maps the structure, nature and evolution of cancer clones.
Nature 611: 2022 594-602 |
48 |
Evolving copy number gains promote tumor expansion and bolster mutational diversification.
Nat Commun 15: 2024 2025 |
7 |