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Methylation array of upper urinary tract urothelial carcinoma

Genome-wide methylation analysis of upper urinary tract urothelial carcinoma using Infinium MethylationEPIC BeadChip Kit

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Integrated genetic analysis of upper urinary tract urothelial carcinoma

DATA ACCESS AGREEMENT These terms and conditions govern access to the managed access datasets (details of which are set out in Appendix I) to which the User Institution has requested access. The User Institution agrees to be bound by these terms and conditions. Definitions Authorised Personnel: The individuals at the User Institution to whom Kyoto University grants access to the Data. This includes the User, the individuals listed in Appendix II and any other individuals for whom the User Institution subsequently requests access to the Data. Details of the initial Authorised Personnel are set out in Appendix II. Data: The managed access datasets to which the User Institution has requested access. Data Producers: Kyoto University and the collaborators listed in Appendix I responsible for the development, organisation, and oversight of these Data. External Collaborator: A collaborator of the User, working for an institution other than the User Institution. Project: The project for which the User Institution has requested access to these Data. A description of the Project is set out in Appendix II. Publications: Includes, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. Research Participant: An individual whose data form part of these Data. Research Purposes: Shall mean research that is seeking to advance the understanding of genetics and genomics, including the treatment of disorders, and work on statistical methods that may be applied to such research. User: The principal investigator for the Project. User Institution(s): The Institution that has requested access to the Data. Kyoto University: Department of Pathology and Tumor Biology, Kyoto University. 1. The User Institution agrees to only use these Data for the purpose of the Project (described in Appendix II) and only for Research Purposes. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in Appendix I. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. Without prejudice to the generality of the foregoing, the User Institution agrees to use at least the measures set out in Appendix I to protect these Data. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. 4. The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that data has been formally granted to the User Institution or is freely available without restriction. 5. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorised Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data. 6. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or protection of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 7. The User Institution agrees to follow the Fort Lauderdale Guidelines (http://www.wellcome.ac.uk/stellent/groups/corporatesite/@policy_communications/documents/web_document/wtd003207.pdf) and the Toronto Statement (http://www.nature.com/nature/journal/v461/n7261/full/461168a.html). This includes but is not limited to recognising the contribution of the Data Producers and including a proper acknowledgement in all reports or publications resulting from the use of these Data. 8. The User Institution agrees to follow the Publication Policy in Appendix III. This includes respecting the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analysing these Data. 9. The User Institution agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 10. The User Institution can elect to perform further research that would add intellectual and resource capital to these data and decide to obtain intellectual property rights on these downstream discoveries. In this case, the User Institution agrees to implement licensing policies that will not obstruct further research and to follow the U.S. National Institutes of Health Best Practices for the Licensing of Genomic Inventions (2005) (https://www.icgc.org/files/daco/NIH_BestPracticesLicensingGenomicInventions_2005_en.pdf ) in conformity with the Organisation for Economic Co-operation and Development Guidelines for the Licensing of the Genetic Inventions (2006) (http://www.oecd.org/science/biotech/36198812.pdf ). 11. The User Institution agrees to destroy/discard the Data held, once it is no longer used for the Project, unless obliged to retain the data for archival purposes in conformity with audit or legal requirements. 12. The User Institution will notify Kyoto University within 30 days of any changes or departures of Authorised Personnel. 13. The User Institution will notify Kyoto University prior to any significant changes to the protocol for the Project. 14. The User Institution will notify Kyoto University as soon as it becomes aware of a breach of the terms or conditions of this agreement. 15. Kyoto University may terminate this agreement by written notice to the User Institution. If this agreement terminates for any reason, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purpose in conformity with audit or legal requirements. 16. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. As an example, this may include specific provisions relating to the Data required by Data Producers other than Kyoto University. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 17. If requested, the User Institution will allow data security and management documentation to be inspected to verify that it is complying with the terms of this agreement. 18. The User Institution agrees to distribute a copy of these terms to the Authorised Personnel. The User Institution will procure that the Authorised Personnel comply with the terms of this agreement. 19. This agreement (and any dispute, controversy, proceedings or claim of whatever nature arising out of this agreement or its formation) shall be construed, interpreted and governed by the laws of Japan and shall be subject to the exclusive jurisdiction of the Japanese courts.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005198848 idat 13.7 MB
EGAF00005198849 idat 13.7 MB
EGAF00005198850 idat 13.7 MB
EGAF00005198851 idat 13.7 MB
EGAF00005198852 idat 13.7 MB
EGAF00005198853 idat 13.7 MB
EGAF00005198854 idat 13.7 MB
EGAF00005198855 idat 13.7 MB
EGAF00005198856 idat 13.7 MB
EGAF00005198857 idat 13.7 MB
EGAF00005198858 idat 13.7 MB
EGAF00005198859 idat 13.7 MB
EGAF00005198860 idat 13.7 MB
EGAF00005198861 idat 13.7 MB
EGAF00005198862 idat 13.7 MB
EGAF00005198863 idat 13.7 MB
EGAF00005198864 idat 13.7 MB
EGAF00005198865 idat 13.7 MB
EGAF00005198866 idat 13.7 MB
EGAF00005198867 idat 13.7 MB
EGAF00005198868 idat 13.7 MB
EGAF00005198869 idat 13.7 MB
EGAF00005198870 idat 13.7 MB
EGAF00005198871 idat 13.7 MB
EGAF00005198872 idat 13.7 MB
EGAF00005198873 idat 13.7 MB
EGAF00005198874 idat 13.7 MB
EGAF00005198875 idat 13.7 MB
EGAF00005198876 idat 13.7 MB
EGAF00005198877 idat 13.7 MB
EGAF00005198878 idat 13.7 MB
EGAF00005198879 idat 13.7 MB
EGAF00005198880 idat 13.7 MB
EGAF00005198881 idat 13.7 MB
EGAF00005198882 idat 13.7 MB
EGAF00005198883 idat 13.7 MB
EGAF00005198884 idat 13.7 MB
EGAF00005198885 idat 13.7 MB
EGAF00005198886 idat 13.7 MB
EGAF00005198887 idat 13.7 MB
EGAF00005198888 idat 13.7 MB
EGAF00005198889 idat 13.7 MB
EGAF00005198890 idat 13.7 MB
EGAF00005198891 idat 13.7 MB
EGAF00005198892 idat 13.7 MB
EGAF00005198893 idat 13.7 MB
EGAF00005198894 idat 13.7 MB
EGAF00005198895 idat 13.7 MB
EGAF00005198896 idat 13.7 MB
EGAF00005198897 idat 13.7 MB
EGAF00005198898 idat 13.7 MB
EGAF00005198899 idat 13.7 MB
EGAF00005198900 idat 13.7 MB
EGAF00005198901 idat 13.7 MB
EGAF00005198902 idat 13.7 MB
EGAF00005198903 idat 13.7 MB
EGAF00005198904 idat 13.7 MB
EGAF00005198905 idat 13.7 MB
EGAF00005198906 idat 13.7 MB
EGAF00005198907 idat 13.7 MB
EGAF00005198908 idat 13.7 MB
EGAF00005198909 idat 13.7 MB
EGAF00005198910 idat 13.7 MB
EGAF00005198911 idat 13.7 MB
EGAF00005198912 idat 13.7 MB
EGAF00005198913 idat 13.7 MB
EGAF00005198914 idat 13.7 MB
EGAF00005198915 idat 13.7 MB
EGAF00005198916 idat 13.7 MB
EGAF00005198917 idat 13.7 MB
EGAF00005198918 idat 13.7 MB
EGAF00005198919 idat 13.7 MB
EGAF00005198920 idat 13.7 MB
EGAF00005198921 idat 13.7 MB
EGAF00005198922 idat 13.7 MB
EGAF00005198923 idat 13.7 MB
EGAF00005198924 idat 13.7 MB
EGAF00005198925 idat 13.7 MB
EGAF00005198926 idat 13.7 MB
EGAF00005198927 idat 13.7 MB
EGAF00005198928 idat 13.7 MB
EGAF00005198929 idat 13.7 MB
EGAF00005198930 idat 13.7 MB
EGAF00005198931 idat 13.7 MB
EGAF00005198932 idat 13.7 MB
EGAF00005198933 idat 13.7 MB
EGAF00005198934 idat 13.7 MB
EGAF00005198935 idat 13.7 MB
EGAF00005198936 idat 13.7 MB
EGAF00005198937 idat 13.7 MB
EGAF00005198938 idat 13.7 MB
EGAF00005198939 idat 13.7 MB
EGAF00005198940 idat 13.7 MB
EGAF00005198941 idat 13.7 MB
EGAF00005198942 idat 13.7 MB
EGAF00005198943 idat 13.7 MB
EGAF00005198944 idat 13.7 MB
EGAF00005198945 idat 13.7 MB
EGAF00005198946 idat 13.7 MB
EGAF00005198947 idat 13.7 MB
EGAF00005198948 idat 13.7 MB
EGAF00005198949 idat 13.7 MB
EGAF00005198950 idat 13.7 MB
EGAF00005198951 idat 13.7 MB
EGAF00005198952 idat 13.7 MB
EGAF00005198953 idat 13.7 MB
EGAF00005198954 idat 13.7 MB
EGAF00005198955 idat 13.7 MB
EGAF00005198956 idat 13.7 MB
EGAF00005198957 idat 13.7 MB
EGAF00005198958 idat 13.7 MB
EGAF00005198959 idat 13.7 MB
EGAF00005198960 idat 13.7 MB
EGAF00005198961 idat 13.7 MB
EGAF00005198962 idat 13.7 MB
EGAF00005198963 idat 13.7 MB
EGAF00005198964 idat 13.7 MB
EGAF00005198965 idat 13.7 MB
EGAF00005198966 idat 13.7 MB
EGAF00005198967 idat 13.7 MB
EGAF00005198968 idat 13.7 MB
EGAF00005198969 idat 13.7 MB
EGAF00005198970 idat 13.7 MB
EGAF00005198971 idat 13.7 MB
EGAF00005198972 idat 13.7 MB
EGAF00005198973 idat 13.7 MB
EGAF00005198974 idat 13.7 MB
EGAF00005198975 idat 13.7 MB
EGAF00005198976 idat 13.7 MB
EGAF00005198977 idat 13.7 MB
EGAF00005198978 idat 13.7 MB
EGAF00005198979 idat 13.7 MB
EGAF00005198980 idat 13.7 MB
EGAF00005198981 idat 13.7 MB
EGAF00005198982 idat 13.7 MB
EGAF00005198983 idat 13.7 MB
EGAF00005198984 idat 13.7 MB
EGAF00005198985 idat 13.7 MB
EGAF00005198986 idat 13.7 MB
EGAF00005198987 idat 13.7 MB
EGAF00005198988 idat 13.7 MB
EGAF00005198989 idat 13.7 MB
EGAF00005198990 idat 13.7 MB
EGAF00005198991 idat 13.7 MB
EGAF00005198992 idat 13.7 MB
EGAF00005198993 idat 13.7 MB
EGAF00005198994 idat 13.7 MB
EGAF00005198995 idat 13.7 MB
EGAF00005198996 idat 13.7 MB
EGAF00005198997 idat 13.7 MB
EGAF00005198998 idat 13.7 MB
EGAF00005198999 idat 13.7 MB
EGAF00005199000 idat 13.7 MB
EGAF00005199001 idat 13.7 MB
EGAF00005199002 idat 13.7 MB
EGAF00005199003 idat 13.7 MB
EGAF00005199004 idat 13.7 MB
EGAF00005199005 idat 13.7 MB
EGAF00005199006 idat 13.7 MB
EGAF00005199007 idat 13.7 MB
EGAF00005199008 idat 13.7 MB
EGAF00005199009 idat 13.7 MB
EGAF00005199010 idat 13.7 MB
EGAF00005199011 idat 13.7 MB
EGAF00005199012 idat 13.7 MB
EGAF00005199013 idat 13.7 MB
EGAF00005199014 idat 13.7 MB
EGAF00005199015 idat 13.7 MB
EGAF00005199016 idat 13.7 MB
EGAF00005199017 idat 13.7 MB
EGAF00005199018 idat 13.7 MB
EGAF00005199019 idat 13.7 MB
EGAF00005199020 idat 13.7 MB
EGAF00005199021 idat 13.7 MB
EGAF00005199022 idat 13.7 MB
EGAF00005199023 idat 13.7 MB
EGAF00005199024 idat 13.7 MB
EGAF00005199025 idat 13.7 MB
EGAF00005199026 idat 13.7 MB
EGAF00005199027 idat 13.7 MB
EGAF00005199028 idat 13.7 MB
EGAF00005199029 idat 13.7 MB
EGAF00005199030 idat 13.7 MB
EGAF00005199031 idat 13.7 MB
EGAF00005199032 idat 13.7 MB
EGAF00005199033 idat 13.7 MB
EGAF00005199034 idat 13.7 MB
EGAF00005199035 idat 13.7 MB
188 Files (2.6 GB)