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RFMix

This dataset contains the per-chromosome RFMix input and output files for the local ancestry inference of 59 Aboriginal Australian genomes as reported in Malaspinas et al., 2016. Local ancestry was inferred assuming four mixing ancestral populations represented by: Europeans (27 individuals), Asians (29 individuals), Papuans (13 individuals) and Native Australians (7 individuals from the WCD region).

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Aboriginal Australia Genome Consortium Data Access Form

Aboriginal Australia Genome Consortium_______________________________________________________Application for Access to Genome DataName of applicant and co-applicant(s), including affiliations and contact details.Please ensure that a full postal and email address is included for each applicant.PhD student applicants must include their supervisors as a co-applicant and provide their full contact details.Title of ProjectIn less than 30 words.Genome Data RequestedPlease indicate which genome sequences you are requesting. All individuals genomes have been de-identified, although researchers may request access to genomes of all people from a particular geographic region(s).Research Question(s)Please provide a clear description of the project and its specific aims in no more than 750 words. This should include specific details of what you plan to do with the data and include key references. FeasibilityPlease describe fully your experience and expertise, and that of your collaborators, and how this will be applied to the proposed study. A publication list MUST be provided for the applicant, co-applicants and PhD supervisors where PhD students have applied. The committee needs assurance of competence in handling datasets of this size and nature.Ethics approvalAccess to these genome data requires an appropriate approval from a registered Ethics committee administered by a tertiary institution such as a university or a registered research organisation. Please attach to this application a copy of such an ethics approval for consideration by the Data Access Committee. Any ethics approval provided by an applicant(s) needs to be equivalent to the original approvals obtained by Malaspinas et al. as detailed in Appendices S01.1 and S01.2.Because the ethics approvals from the Griffith University Human Ethics Committee and the University of Copenhagen was granted for population history studies only, donors provided their samples on that understanding. Hence, medical studies cannot be conducted using these datasets. Any requests for these data will need to address issues in population history only.I have read and agree to abide by the terms and conditions outlined in the Data Access Agreement and the Publication Policy?Yes0No0

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00002018755 txt 15.1 MB
EGAF00002018756 rsid 13.1 MB
EGAF00002018757 txt 211.2 MB
EGAF00002018758 rsid 9.3 MB
EGAF00002018759 txt 10.1 MB
EGAF00002018760 rsid 6.1 MB
EGAF00002018761 txt 2.6 MB
EGAF00002018762 txt 4.5 MB
EGAF00002018763 txt 13.4 MB
EGAF00002018764 txt 11.7 MB
EGAF00002018765 txt 9.9 MB
EGAF00002018766 txt 15.8 MB
EGAF00002018767 rsid 16.8 MB
EGAF00002018768 txt 92.7 MB
EGAF00002018771 txt 8.9 MB
EGAF00002018772 txt 1.9 kB
EGAF00002018773 rsid 33.3 MB
EGAF00002018774 rsid 25.9 MB
EGAF00002018775 rsid 26.6 MB
EGAF00002018776 txt 184.3 MB
EGAF00002018777 txt 4.2 MB
EGAF00002018778 txt 17.5 MB
EGAF00002018779 rsid 33.5 MB
EGAF00002018780 txt 74.9 MB
EGAF00002018781 txt 63.7 MB
EGAF00002018782 rsid 29.0 MB
EGAF00002018783 rsid 13.5 MB
EGAF00002018784 txt 6.6 MB
EGAF00002018785 rsid 9.9 MB
EGAF00002018786 rsid 35.1 MB
EGAF00002018788 txt 6.0 MB
EGAF00002018789 txt 7.7 MB
EGAF00002018790 txt 6.0 MB
EGAF00002018791 txt 124.9 MB
EGAF00002018792 txt 164.8 MB
EGAF00002018793 rsid 11.7 MB
EGAF00002018794 txt 221.9 MB
EGAF00002018795 rsid 13.1 MB
EGAF00002018796 txt 188.2 MB
EGAF00002018797 txt 6.2 MB
EGAF00002018798 txt 39.4 MB
EGAF00002018799 rsid 29.7 MB
EGAF00002018800 txt 144.3 MB
EGAF00002018802 txt 84.6 MB
EGAF00002018804 txt 12.0 MB
EGAF00002018805 rsid 39.0 MB
EGAF00002018806 rsid 19.6 MB
EGAF00002018807 rsid 5.8 MB
EGAF00002018808 rsid 14.5 MB
EGAF00002018809 txt 2.8 MB
EGAF00002018810 txt 107.6 MB
EGAF00002018811 txt 500 Bytes
EGAF00002018812 txt 212.3 MB
EGAF00002018813 rsid 21.8 MB
EGAF00002018814 rsid 22.3 MB
EGAF00002018815 txt 87.0 MB
EGAF00002018816 txt 13.1 MB
EGAF00002018817 txt 568 Bytes
EGAF00002018818 rsid 22.7 MB
EGAF00002018819 txt 83.7 MB
EGAF00002018820 txt 138.4 MB
EGAF00002018821 txt 4.4 kB
EGAF00002018822 txt 245.9 MB
EGAF00002018823 txt 5.3 MB
EGAF00002018824 txt 37.1 MB
EGAF00002018825 txt 59.5 MB
EGAF00002018826 txt 168.9 MB
EGAF00002018827 txt 10.3 MB
EGAF00002018829 txt 142.2 MB
EGAF00002018830 txt 15.1 MB
70 Files (3.5 GB)