PRADO trial - Personalized response-directed surgery and adjuvant therapy after neoadjuvant ipilimumab plus nivolumab in stage III melanoma
The dataset includes RNA sequencing data on PRE- treatment biopsies of lymph node metastasis (n=80) The technology used for sequencing is llumina HiSeq 2500
- 80 samples
- DAC: EGAC00001003455
- Technology: Illumina NovaSeq 6000
Institutional review board of the Netherlands Cancer Institute
RNA-sequencing data generated during the study will be deposited in the European Genome-phenome Archive (EGA). Upon a scientifically sound request, data access can be obtained via the NKI’s scientific repository at repository@nki.nl, which will contact the corresponding author (C.U.B.). Data requests will be reviewed by the institutional review board of the Netherlands Cancer Institute (NKI) and will require the requesting researcher to sign a data access agreement with the NKI.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001007601 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00008271866 | fastq.gz | 2.4 GB | ||
| EGAF00008271867 | fastq.gz | 2.6 GB | ||
| EGAF00008271868 | fastq.gz | 2.7 GB | ||
| EGAF00008271869 | fastq.gz | 2.9 GB | ||
| EGAF00008271870 | fastq.gz | 1.9 GB | ||
| EGAF00008271871 | fastq.gz | 2.0 GB | ||
| EGAF00008271872 | fastq.gz | 2.7 GB | ||
| EGAF00008271873 | fastq.gz | 2.9 GB | ||
| EGAF00008271874 | fastq.gz | 2.5 GB | ||
| EGAF00008271875 | fastq.gz | 2.7 GB | ||
| EGAF00008271876 | fastq.gz | 2.8 GB | ||
| EGAF00008271877 | fastq.gz | 3.0 GB | ||
| EGAF00008271878 | fastq.gz | 2.5 GB | ||
| EGAF00008271879 | fastq.gz | 2.7 GB | ||
| EGAF00008271880 | fastq.gz | 2.5 GB | ||
| EGAF00008271881 | fastq.gz | 2.7 GB | ||
| EGAF00008271882 | fastq.gz | 3.0 GB | ||
| EGAF00008271883 | fastq.gz | 3.2 GB | ||
| EGAF00008271884 | fastq.gz | 2.5 GB | ||
| EGAF00008271885 | fastq.gz | 2.6 GB | ||
| EGAF00008271886 | fastq.gz | 2.4 GB | ||
| EGAF00008271887 | fastq.gz | 2.6 GB | ||
| EGAF00008271888 | fastq.gz | 2.9 GB | ||
| EGAF00008271889 | fastq.gz | 3.2 GB | ||
| EGAF00008271890 | fastq.gz | 2.4 GB | ||
| EGAF00008271891 | fastq.gz | 2.6 GB | ||
| EGAF00008271892 | fastq.gz | 3.1 GB | ||
| EGAF00008271893 | fastq.gz | 3.3 GB | ||
| EGAF00008271894 | fastq.gz | 2.7 GB | ||
| EGAF00008271895 | fastq.gz | 2.9 GB | ||
| EGAF00008271896 | fastq.gz | 2.0 GB | ||
| EGAF00008271897 | fastq.gz | 2.1 GB | ||
| EGAF00008271898 | fastq.gz | 2.1 GB | ||
| EGAF00008271899 | fastq.gz | 2.2 GB | ||
| EGAF00008271900 | fastq.gz | 2.4 GB | ||
| EGAF00008271901 | fastq.gz | 2.6 GB | ||
| EGAF00008271902 | fastq.gz | 2.8 GB | ||
| EGAF00008271903 | fastq.gz | 3.0 GB | ||
| EGAF00008271904 | fastq.gz | 2.7 GB | ||
| EGAF00008271905 | fastq.gz | 2.9 GB | ||
| EGAF00008271906 | fastq.gz | 15.9 GB | ||
| EGAF00008271907 | fastq.gz | 16.8 GB | ||
| EGAF00008271908 | fastq.gz | 2.1 GB | ||
| EGAF00008271909 | fastq.gz | 2.3 GB | ||
| EGAF00008271910 | fastq.gz | 3.0 GB | ||
| EGAF00008271911 | fastq.gz | 3.2 GB | ||
| EGAF00008271912 | fastq.gz | 2.6 GB | ||
| EGAF00008271913 | fastq.gz | 2.8 GB | ||
| EGAF00008271914 | fastq.gz | 2.9 GB | ||
| EGAF00008271915 | fastq.gz | 3.1 GB | ||
| EGAF00008271916 | fastq.gz | 2.6 GB | ||
| EGAF00008271917 | fastq.gz | 2.8 GB | ||
| EGAF00008271918 | fastq.gz | 2.2 GB | ||
| EGAF00008271919 | fastq.gz | 2.4 GB | ||
| EGAF00008271920 | fastq.gz | 3.1 GB | ||
| EGAF00008271921 | fastq.gz | 3.2 GB | ||
| EGAF00008271922 | fastq.gz | 2.5 GB | ||
| EGAF00008271923 | fastq.gz | 2.7 GB | ||
| EGAF00008271924 | fastq.gz | 2.4 GB | ||
| EGAF00008271925 | fastq.gz | 2.6 GB | ||
| EGAF00008271926 | fastq.gz | 2.5 GB | ||
| EGAF00008271927 | fastq.gz | 2.6 GB | ||
| EGAF00008271928 | fastq.gz | 2.7 GB | ||
| EGAF00008271929 | fastq.gz | 2.9 GB | ||
| EGAF00008271930 | fastq.gz | 2.1 GB | ||
| EGAF00008271931 | fastq.gz | 2.3 GB | ||
| EGAF00008271932 | fastq.gz | 2.3 GB | ||
| EGAF00008271933 | fastq.gz | 2.5 GB | ||
| EGAF00008271934 | fastq.gz | 2.3 GB | ||
| EGAF00008271935 | fastq.gz | 2.4 GB | ||
| EGAF00008271936 | fastq.gz | 2.0 GB | ||
| EGAF00008271937 | fastq.gz | 2.2 GB | ||
| EGAF00008271938 | fastq.gz | 2.8 GB | ||
| EGAF00008271939 | fastq.gz | 3.0 GB | ||
| EGAF00008271940 | fastq.gz | 2.9 GB | ||
| EGAF00008271941 | fastq.gz | 3.0 GB | ||
| EGAF00008271942 | fastq.gz | 2.1 GB | ||
| EGAF00008271943 | fastq.gz | 2.3 GB | ||
| EGAF00008271944 | fastq.gz | 3.0 GB | ||
| EGAF00008271945 | fastq.gz | 3.1 GB | ||
| EGAF00008271946 | fastq.gz | 3.4 GB | ||
| EGAF00008271947 | fastq.gz | 3.6 GB | ||
| EGAF00008271948 | fastq.gz | 2.2 GB | ||
| EGAF00008271949 | fastq.gz | 2.4 GB | ||
| EGAF00008271950 | fastq.gz | 3.4 GB | ||
| EGAF00008271951 | fastq.gz | 3.6 GB | ||
| EGAF00008271952 | fastq.gz | 3.0 GB | ||
| EGAF00008271953 | fastq.gz | 3.2 GB | ||
| EGAF00008271954 | fastq.gz | 2.8 GB | ||
| EGAF00008271955 | fastq.gz | 3.1 GB | ||
| EGAF00008271956 | fastq.gz | 2.2 GB | ||
| EGAF00008271957 | fastq.gz | 2.3 GB | ||
| EGAF00008271958 | fastq.gz | 3.2 GB | ||
| EGAF00008271959 | fastq.gz | 3.4 GB | ||
| EGAF00008271960 | fastq.gz | 2.5 GB | ||
| EGAF00008271961 | fastq.gz | 2.7 GB | ||
| EGAF00008271962 | fastq.gz | 2.3 GB | ||
| EGAF00008271963 | fastq.gz | 2.5 GB | ||
| EGAF00008271964 | fastq.gz | 2.7 GB | ||
| EGAF00008271965 | fastq.gz | 2.9 GB | ||
| EGAF00008271966 | fastq.gz | 2.7 GB | ||
| EGAF00008271967 | fastq.gz | 2.8 GB | ||
| EGAF00008271968 | fastq.gz | 2.7 GB | ||
| EGAF00008271969 | fastq.gz | 2.9 GB | ||
| EGAF00008271970 | fastq.gz | 3.8 GB | ||
| EGAF00008271971 | fastq.gz | 4.1 GB | ||
| EGAF00008271972 | fastq.gz | 2.8 GB | ||
| EGAF00008271973 | fastq.gz | 2.9 GB | ||
| EGAF00008271974 | fastq.gz | 2.6 GB | ||
| EGAF00008271975 | fastq.gz | 2.7 GB | ||
| EGAF00008271976 | fastq.gz | 2.2 GB | ||
| EGAF00008271977 | fastq.gz | 2.3 GB | ||
| EGAF00008271978 | fastq.gz | 3.0 GB | ||
| EGAF00008271979 | fastq.gz | 3.2 GB | ||
| EGAF00008271980 | fastq.gz | 3.8 GB | ||
| EGAF00008271981 | fastq.gz | 4.1 GB | ||
| EGAF00008271982 | fastq.gz | 2.7 GB | ||
| EGAF00008271983 | fastq.gz | 2.8 GB | ||
| EGAF00008271984 | fastq.gz | 3.1 GB | ||
| EGAF00008271985 | fastq.gz | 3.3 GB | ||
| EGAF00008271986 | fastq.gz | 3.0 GB | ||
| EGAF00008271987 | fastq.gz | 3.2 GB | ||
| EGAF00008271988 | fastq.gz | 2.5 GB | ||
| EGAF00008271989 | fastq.gz | 2.8 GB | ||
| EGAF00008271990 | fastq.gz | 3.8 GB | ||
| EGAF00008271991 | fastq.gz | 4.0 GB | ||
| EGAF00008271992 | fastq.gz | 3.7 GB | ||
| EGAF00008271993 | fastq.gz | 3.8 GB | ||
| EGAF00008271994 | fastq.gz | 3.1 GB | ||
| EGAF00008271995 | fastq.gz | 3.4 GB | ||
| EGAF00008271996 | fastq.gz | 2.7 GB | ||
| EGAF00008271997 | fastq.gz | 2.9 GB | ||
| EGAF00008271998 | fastq.gz | 3.1 GB | ||
| EGAF00008271999 | fastq.gz | 3.3 GB | ||
| EGAF00008272000 | fastq.gz | 3.1 GB | ||
| EGAF00008272001 | fastq.gz | 3.3 GB | ||
| EGAF00008272002 | fastq.gz | 3.6 GB | ||
| EGAF00008272003 | fastq.gz | 3.8 GB | ||
| EGAF00008272004 | fastq.gz | 3.2 GB | ||
| EGAF00008272005 | fastq.gz | 3.4 GB | ||
| EGAF00008272006 | fastq.gz | 2.2 GB | ||
| EGAF00008272007 | fastq.gz | 2.3 GB | ||
| EGAF00008272008 | fastq.gz | 3.6 GB | ||
| EGAF00008272009 | fastq.gz | 3.8 GB | ||
| EGAF00008272010 | fastq.gz | 3.3 GB | ||
| EGAF00008272011 | fastq.gz | 3.4 GB | ||
| EGAF00008272012 | fastq.gz | 4.4 GB | ||
| EGAF00008272013 | fastq.gz | 4.6 GB | ||
| EGAF00008272014 | fastq.gz | 3.4 GB | ||
| EGAF00008272015 | fastq.gz | 3.6 GB | ||
| EGAF00008272016 | fastq.gz | 2.1 GB | ||
| EGAF00008272017 | fastq.gz | 2.2 GB | ||
| EGAF00008272018 | fastq.gz | 1.6 GB | ||
| EGAF00008272019 | fastq.gz | 1.8 GB | ||
| EGAF00008272020 | fastq.gz | 3.1 GB | ||
| EGAF00008272021 | fastq.gz | 3.3 GB | ||
| EGAF00008272022 | fastq.gz | 3.5 GB | ||
| EGAF00008272023 | fastq.gz | 3.6 GB | ||
| EGAF00008272024 | fastq.gz | 2.8 GB | ||
| EGAF00008272025 | fastq.gz | 3.0 GB | ||
| 160 Files (484.0 GB) | ||||