Intra-prostatic tumour evolution, steps in metastatic spread and histogenomic associations revealed by integration of multi-region whole genome sequencing with histopathological features
We performed whole genome sequencing on 42 prostate cancer samples from the prostate, seminal vesicles and regional lymph nodes of five treatment-naive patients with locally advanced disease who underwent radical prostatectomy. Whole genome sequencing was performed as 150bp paired end reads on the Illumina NovaSeq 6000 platform.
- 48 samples
- DAC: EGAC00001003354
- Technology: Illumina NovaSeq 6000
Data access policy for ProMOTE Genomics project
Investigators who download restricted data from this dataset should: - Not attempt to identify individual human research participants from whom the data were obtained. - Acknowledge in all oral or written presentations, disclosures, or publications the specific dataset(s) or applicable accession number(s)and the repositories through which the investigator accessed any data. Any user requesting access to this data must apply for authorization, which is granted by the ProMOTE Data Access Committee (DAC). The DAC will review and approve or disapprove all requests from the research community for data access. Decisions to grant access are made based on whether the request conforms to the specifications of the Research Ethics Committee approval and program specific requirements or procedures (if any).
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
Study ID | Study Title | Study Type |
---|---|---|
EGAS00001007438 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
ID | File Type | Size | Located in | |
---|---|---|---|---|
EGAF00008172687 | cram | 75.3 GB | ||
EGAF00008172688 | cram | 77.2 GB | ||
EGAF00008172689 | cram | 65.4 GB | ||
EGAF00008172690 | cram | 59.5 GB | ||
EGAF00008172691 | cram | 53.1 GB | ||
EGAF00008172692 | cram | 49.7 GB | ||
EGAF00008172693 | cram | 60.3 GB | ||
EGAF00008172694 | cram | 48.3 GB | ||
EGAF00008172695 | cram | 42.4 GB | ||
EGAF00008172696 | cram | 42.5 GB | ||
EGAF00008172697 | cram | 26.3 GB | ||
EGAF00008172698 | cram | 44.8 GB | ||
EGAF00008172699 | cram | 40.6 GB | ||
EGAF00008172700 | cram | 46.8 GB | ||
EGAF00008172701 | cram | 19.7 GB | ||
EGAF00008172702 | cram | 14.5 GB | ||
EGAF00008172703 | cram | 47.6 GB | ||
EGAF00008172704 | cram | 47.0 GB | ||
EGAF00008172705 | cram | 39.9 GB | ||
EGAF00008172706 | cram | 43.4 GB | ||
EGAF00008172707 | cram | 48.1 GB | ||
EGAF00008172708 | cram | 27.7 GB | ||
EGAF00008172709 | cram | 101.2 GB | ||
EGAF00008172710 | cram | 42.3 GB | ||
EGAF00008172711 | cram | 40.2 GB | ||
EGAF00008172712 | cram | 51.7 GB | ||
EGAF00008172713 | cram | 44.8 GB | ||
EGAF00008172714 | cram | 46.8 GB | ||
EGAF00008172715 | cram | 46.9 GB | ||
EGAF00008172716 | cram | 51.0 GB | ||
EGAF00008172717 | cram | 13.8 GB | ||
EGAF00008172718 | cram | 75.8 GB | ||
EGAF00008172719 | cram | 42.7 GB | ||
EGAF00008172720 | cram | 23.6 GB | ||
EGAF00008172721 | cram | 48.3 GB | ||
EGAF00008172722 | cram | 51.9 GB | ||
EGAF00008172723 | cram | 40.3 GB | ||
EGAF00008172724 | cram | 41.8 GB | ||
EGAF00008172725 | cram | 45.1 GB | ||
EGAF00008172726 | cram | 42.7 GB | ||
EGAF00008172727 | cram | 46.4 GB | ||
EGAF00008172728 | cram | 47.3 GB | ||
EGAF00008172729 | cram | 45.4 GB | ||
EGAF00008172730 | cram | 45.1 GB | ||
EGAF00008172731 | cram | 44.3 GB | ||
EGAF00008172732 | cram | 47.4 GB | ||
EGAF00008172733 | cram | 42.5 GB | ||
EGAF00008172734 | cram | 52.0 GB | ||
48 Files (2.2 TB) |