Genotyping of GM samples
This dataset contains a vcf file for 99 GM individuals genotyped on the Illumina HumanOmni2.5 array . The vcf file is originated after imputation (IMPUTE2) and filtering for minor allele frequency MAF≥0.05, imputation confidence score INFO of >0.4 and Hardy-Weinberg Equilibrium (HWE) p>1e-06, yielding ~6.3 million variants.
- 1 sample
- DAC: EGAC00001003175
Data access policy for the GM adipose study
For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. If you need to request access to this data set, please contact: GM adipose Data Access Committee Contact person: Dr Antigone Dimas email: dimas@fleming.gr
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |