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RNAseq data from NEN patient derived tumor organoids (PDTOs) and matched parental tumors - NKI/UMCU

The dataset includes fastq files from 15 NEN tumors or metastases and matched PDTOs. The sequencing was done with either a Nextseq 2000 or a NovaSeq 6000 instrument.

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Neuroendocrine neoplasm organoids project's data access policy - UMCU/NKI samples

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact dacdbg@umcutrecht.nl Following DUO codes are applied to the UMCU/NKI datasets: DUO_0000007; MONDO:0004992

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005752 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005686936 fastq.gz 5.5 GB
EGAF00005686937 fastq.gz 5.9 GB
EGAF00005686938 fastq.gz 3.2 GB
EGAF00005686939 fastq.gz 3.4 GB
EGAF00005686940 fastq.gz 6.2 GB
EGAF00005686941 fastq.gz 6.8 GB
EGAF00005686946 fastq.gz 7.0 GB
EGAF00005686947 fastq.gz 7.3 GB
EGAF00005686948 fastq.gz 6.2 GB
EGAF00005686949 fastq.gz 6.5 GB
EGAF00005686950 fastq.gz 6.0 GB
EGAF00005686951 fastq.gz 6.6 GB
EGAF00005686952 fastq.gz 6.0 GB
EGAF00005686953 fastq.gz 6.4 GB
EGAF00005686954 fastq.gz 6.3 GB
EGAF00005686955 fastq.gz 6.6 GB
EGAF00005686958 fastq.gz 5.1 GB
EGAF00005686959 fastq.gz 5.3 GB
EGAF00005686962 fastq.gz 5.1 GB
EGAF00005686963 fastq.gz 5.5 GB
EGAF00005686968 fastq.gz 5.4 GB
EGAF00005686969 fastq.gz 5.8 GB
EGAF00005686970 fastq.gz 6.0 GB
EGAF00005686971 fastq.gz 6.2 GB
EGAF00005686972 fastq.gz 5.9 GB
EGAF00005686973 fastq.gz 6.1 GB
EGAF00005686974 fastq.gz 6.7 GB
EGAF00005686975 fastq.gz 6.9 GB
EGAF00005686978 fastq.gz 7.4 GB
EGAF00005686979 fastq.gz 8.0 GB
EGAF00005686980 fastq.gz 6.3 GB
EGAF00005686981 fastq.gz 6.5 GB
EGAF00005686982 fastq.gz 5.3 GB
EGAF00005686983 fastq.gz 5.6 GB
EGAF00005686984 fastq.gz 5.6 GB
EGAF00005686985 fastq.gz 5.8 GB
EGAF00005686988 fastq.gz 6.1 GB
EGAF00005686989 fastq.gz 6.3 GB
EGAF00005686992 fastq.gz 6.2 GB
EGAF00005686993 fastq.gz 6.7 GB
EGAF00005686996 fastq.gz 7.5 GB
EGAF00005686997 fastq.gz 8.1 GB
EGAF00005687000 fastq.gz 6.6 GB
EGAF00005687001 fastq.gz 6.9 GB
EGAF00005687002 fastq.gz 6.7 GB
EGAF00005687003 fastq.gz 7.2 GB
EGAF00005687004 fastq.gz 6.3 GB
EGAF00005687005 fastq.gz 6.6 GB
EGAF00005687008 fastq.gz 6.7 GB
EGAF00005687009 fastq.gz 7.0 GB
EGAF00005687010 fastq.gz 6.5 GB
EGAF00005687011 fastq.gz 6.9 GB
EGAF00005687012 fastq.gz 5.8 GB
EGAF00005687013 fastq.gz 6.1 GB
EGAF00005687014 fastq.gz 5.4 GB
EGAF00005687015 fastq.gz 5.7 GB
EGAF00005687016 fastq.gz 4.8 GB
EGAF00005687017 fastq.gz 5.2 GB
EGAF00005687022 fastq.gz 6.6 GB
EGAF00005687023 fastq.gz 7.0 GB
EGAF00005687024 fastq.gz 6.1 GB
EGAF00005687025 fastq.gz 6.6 GB
62 Files (384.1 GB)