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RNAseq data from NEN patient derived tumor organoids (PDTOs) and matched parental tumors - MUMC

The dataset includes fastq files from 4 NEN tumors or metastases and matched PDTOs. The sequencing was done with either a Nextseq 2000 or a NovaSeq 6000 instrument.

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Neuroendocrine neoplasm organoids project's data access policy - MUMC samples

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact dacdbg@umcutrecht.nl Following DUO codes are applied to the MUMC datasets: DUO_0000007; MONDO:0008903 DUO_0000018 DUO_0000022

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005752 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005686944 fastq.gz 7.8 GB
EGAF00005686945 fastq.gz 8.4 GB
EGAF00005686956 fastq.gz 7.1 GB
EGAF00005686957 fastq.gz 7.6 GB
EGAF00005686960 fastq.gz 7.1 GB
EGAF00005686961 fastq.gz 7.6 GB
EGAF00005686966 fastq.gz 6.0 GB
EGAF00005686967 fastq.gz 6.2 GB
EGAF00005686986 fastq.gz 7.6 GB
EGAF00005686987 fastq.gz 8.1 GB
EGAF00005686990 fastq.gz 5.4 GB
EGAF00005686991 fastq.gz 5.6 GB
EGAF00005686994 fastq.gz 6.0 GB
EGAF00005686995 fastq.gz 6.3 GB
EGAF00005686998 fastq.gz 6.2 GB
EGAF00005686999 fastq.gz 6.5 GB
EGAF00005687018 fastq.gz 7.5 GB
EGAF00005687019 fastq.gz 8.0 GB
EGAF00005687020 fastq.gz 6.7 GB
EGAF00005687021 fastq.gz 7.2 GB
20 Files (139.1 GB)