Need Help?

WGS data from NEN patient derived tumor organoids (PDTOs) and matched parental tumors - MUMC

The dataset includes cram files from WGS of 2 NEN tumors and matched PDTOs. For all tumors, cram files from WGS of matched normal tissue from the corresponding patients are included. Analysis VCF files are also included in the dataset. The sequencing was done with a NovaSeq 6000 instrument.

Request Access

Neuroendocrine neoplasm organoids project's data access policy - MUMC samples

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact dacdbg@umcutrecht.nl Following DUO codes are applied to the MUMC datasets: DUO_0000007; MONDO:0008903 DUO_0000018 DUO_0000022

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005752 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005686479 cram 58.1 GB
EGAF00005686480 cram 104.9 GB
EGAF00005686481 cram 69.0 GB
EGAF00005686482 cram 122.4 GB
EGAF00005686483 cram 106.3 GB
EGAF00005686484 cram 93.9 GB
EGAF00005687404 crai 3.3 MB
EGAF00005687406 crai 1.6 MB
EGAF00005687408 crai 3.8 MB
EGAF00005687414 crai 3.4 MB
EGAF00005687417 crai 2.1 MB
EGAF00005687423 crai 2.9 MB
EGAF00006881722 vcf.gz 6.2 MB
EGAF00006881723 vcf.gz 1.1 MB
14 Files (554.6 GB)