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Single-cell RNA and TCR sequencing of BALF from 11 ICI-pneumonitis patients and 6 controls

Dataset containing the FASTQ files of RNA (scr*) and TCR (vdj*) sequencing of 17 bronchoalveolar lavage fluid samples collected from ICI pneumonitis (n=11) and control (n=6) patients. To comply with GDPR regulations, please note that individual sample identifiers used for this data deposit (alphabetical ID) are different from and cannot be traced back to the patient identifiers used throughout the manuscript (numerical ID).

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VIB Policy for Data Access and Data Transfer

VIB Policy for Data Access and Data Transfer Applicability This policy applies to the access to and transfer of VIB research datasets that contain non-anonymous Personal Data which are subject to the provisions of the General Data Protection Regulation (EU) 2016/679. Access/transfer conditions - The access/transfer is subject to approval by the VIB Data Access Committee. - The proposed research purpose should not be incompatible with the primary research purpose for which the data were originally generated. - The Recipient shall have in place adequate safeguards for the protection of Personal Data. - Access is subject to a Data Transfer/Access Agreement which will be managed by VIB Innovation & Business. - The Data Transfer/Access will be limited to the Data that are necessary for the proposed research. Access/transfer procedure - Requests to access or obtain non-anonymous datasets should be submitted to the responsible corresponding author that has uploaded the dataset into the repository, and with a copy to dac@vib.be. - The request should contain the following information: o Name, affiliation (legal entity) and contact information of the requesting recipient party. o Reference to the specific dataset(s) for which access or transfer is requested. o Description of the research purpose for which the data will be used. - The VIB Data Access Committee takes decisions to approve access/transfer within 14 days upon receipt of the request. - Data access will be given / Data will be transferred after completion of the Data Transfer/Access Agreement.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00007698522 1668429021536 3.4 GB
EGAF00007698523 1668429021536 9.6 GB
EGAF00007698524 1668430821044 23.5 GB
EGAF00007698525 1668428122542 2.2 GB
EGAF00007698526 1668429021536 6.5 GB
EGAF00007698527 1668429921085 15.3 GB
EGAF00007698528 1668428122542 3.0 GB
EGAF00007698529 1668429021536 9.0 GB
EGAF00007698530 1668430821044 21.5 GB
EGAF00007698531 1668428122542 1.1 GB
EGAF00007698532 1668428122542 3.5 GB
EGAF00007698533 1668429921085 8.4 GB
EGAF00007698534 1668428122542 2.8 GB
EGAF00007698535 1668429021536 7.7 GB
EGAF00007698536 1668429921085 18.5 GB
EGAF00007698537 1668428122542 3.6 GB
EGAF00007698538 1668429921085 11.0 GB
EGAF00007698539 1668430821044 26.9 GB
EGAF00007698540 1668428122542 3.1 GB
EGAF00007698541 1668429021536 9.0 GB
EGAF00007698542 1668429921085 21.8 GB
EGAF00007698543 1668428122542 1.5 GB
EGAF00007698544 1668429021536 4.3 GB
EGAF00007698545 1668429021536 10.5 GB
EGAF00007698546 1668428122542 3.0 GB
EGAF00007698547 1668429021536 9.5 GB
EGAF00007698548 1668429921085 23.1 GB
EGAF00007698549 1668429921085 15.7 GB
EGAF00007698550 1668432621017 46.7 GB
EGAF00007698551 1668437121018 113.4 GB
EGAF00007698552 1668429021536 1.5 GB
EGAF00007698553 1668429921085 4.7 GB
EGAF00007698554 1668429921085 11.1 GB
EGAF00007698555 1668428122542 3.6 GB
EGAF00007698556 1668429921085 10.2 GB
EGAF00007698557 1668430821044 25.0 GB
EGAF00007698558 1668428122542 2.2 GB
EGAF00007698559 1668429021536 6.2 GB
EGAF00007698560 1668429921085 15.1 GB
EGAF00007698561 1668428122542 376.9 MB
EGAF00007698562 1668428122542 1.1 GB
EGAF00007698563 1668429021536 2.4 GB
EGAF00007698564 1668428122542 3.0 GB
EGAF00007698565 1668429021536 9.4 GB
EGAF00007698566 1668429921085 23.1 GB
EGAF00007698567 1668428122542 2.7 GB
EGAF00007698568 1668429021536 7.3 GB
EGAF00007698569 1668429921085 17.4 GB
EGAF00007698570 1668428122542 647.4 MB
EGAF00007698571 1668428122542 1.9 GB
EGAF00007698572 1668428122542 4.4 GB
EGAF00007698573 1668428122542 56.7 MB
EGAF00007698574 1668428122542 147.5 MB
EGAF00007698575 1668428122542 346.8 MB
EGAF00007698576 1668428122542 38.6 MB
EGAF00007698577 1668428122542 99.5 MB
EGAF00007698578 1668428122542 234.3 MB
EGAF00007698579 1668428122542 179.5 MB
EGAF00007698580 1668428122542 496.6 MB
EGAF00007698581 1668428122542 1.2 GB
EGAF00007698582 1668428122542 206.4 MB
EGAF00007698583 1668428122542 603.2 MB
EGAF00007698584 1668428122542 1.5 GB
EGAF00007698585 1668428122542 134.5 MB
EGAF00007698586 1668428122542 385.5 MB
EGAF00007698587 1668428122542 918.4 MB
EGAF00007698588 1668428122542 26.5 MB
EGAF00007698589 1668428122542 70.2 MB
EGAF00007698590 1668428122542 160.9 MB
EGAF00007698591 1668428122542 130.3 MB
EGAF00007698592 1668429021536 1.8 GB
EGAF00007698593 1668429021536 2.0 GB
EGAF00007698594 1668428122542 179.6 MB
EGAF00007698595 1668428122542 500.9 MB
EGAF00007698596 1668428122542 1.2 GB
EGAF00007698597 1668428122542 245.7 MB
EGAF00007698598 1668428122542 674.6 MB
EGAF00007698599 1668428122542 1.6 GB
EGAF00007698600 1668428122542 375.1 MB
EGAF00007698601 1668429021536 2.5 GB
EGAF00007698602 1668428122542 3.4 GB
EGAF00007698603 1668428122542 255.8 MB
EGAF00007698604 1668428122542 734.2 MB
EGAF00007698605 1668428122542 1.7 GB
EGAF00007698606 1668428122542 792.6 MB
EGAF00007698607 1668428122542 3.0 GB
EGAF00007698608 1668429021536 5.8 GB
EGAF00007698609 1668428122542 223.0 MB
EGAF00007698610 1668428122542 625.7 MB
EGAF00007698611 1668428122542 1.5 GB
EGAF00007698612 1668428122542 221.3 MB
EGAF00007698613 1668428122542 3.0 GB
EGAF00007698614 1668429021536 3.4 GB
EGAF00007698615 1668428122542 265.2 MB
EGAF00007698616 1668428122542 777.2 MB
EGAF00007698617 1668428122542 1.8 GB
EGAF00007698618 1668428122542 258.6 MB
EGAF00007698619 1668428122542 702.7 MB
EGAF00007698620 1668428122542 1.5 GB
EGAF00007698621 1668428122542 178.0 MB
EGAF00007698622 1668428122542 2.5 GB
EGAF00007698623 1668429021536 2.8 GB
102 Files (645.5 GB)