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Dataset of 4 WGS and 35 WES tumor and control runs linked for the ImmuNEO publication out of EGAS00001004813

Sequencing data of 39 tumor and control runs (different tumors and blood controls), which were uploaded to EGAS00001004813 and reused in this ImmuNEO publication. The sequencing was always paired.

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Data Transfer Agreement for the German Cancer Research Center

To request access to the dataset please start a Data Access Request via the EGA DAC Portal. You will receive a HIPO DACO Info Form by email to collect information about the request, which has to be filled completely and signed by your PI. Your request will be evaluated by the responsible Data Access Committee (DAC) and our Data protection department (and innovation management if required). As soon as a positive decision is made, you will be provided with a data transfer agreement (DTA). After the DTA has been fully signed, access to the requested data is granted. To ensure that the process can be completed as quickly as possible, please note the following points: 1. The request in the EGA portal must be made by the responsible PI. 2. The information in the EGA portal must match the information on the HIPO DACO Info Form. In particular, the email address and the requested data sets must match. It is also important that all requested data sets are also listed on the HIPO DACO Info Form. For-profit companies are charged a fee per request.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004338 Cancer Genomics
EGAS00001005145 Cancer Genomics
EGAS00001006706 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00004196651 bam 6.5 GB
EGAF00004196665 bam 8.5 GB
EGAF00004196666 bam 7.1 GB
EGAF00004196724 bam 11.2 GB
EGAF00004196745 bam 7.2 GB
EGAF00004196790 bam 10.0 GB
EGAF00004196813 bam 6.1 GB
EGAF00004196852 bam 10.9 GB
EGAF00004915594 bam 151.7 GB
EGAF00004915601 bam 149.1 GB
EGAF00005717045 bam 5.1 GB
EGAF00005717047 bam 11.7 GB
EGAF00005717192 bam 6.7 GB
EGAF00005717193 bam 9.8 GB
EGAF00005717276 bam 10.5 GB
EGAF00005717277 bam 6.9 GB
EGAF00005717825 bam 10.7 GB
EGAF00005717826 bam 6.0 GB
EGAF00005718129 bam 10.5 GB
EGAF00005718130 bam 6.2 GB
EGAF00005718131 bam 10.8 GB
EGAF00005718132 bam 6.9 GB
EGAF00005718162 bam 11.0 GB
EGAF00005718165 bam 7.0 GB
EGAF00005718200 bam 7.5 GB
EGAF00005718202 bam 10.2 GB
EGAF00005718231 bam 12.3 GB
EGAF00005718233 bam 6.9 GB
EGAF00005718269 bam 8.2 GB
EGAF00005718270 bam 7.3 GB
EGAF00005718283 bam 7.1 GB
EGAF00005718284 bam 9.8 GB
EGAF00006160562 fastq.gz 4.9 GB
EGAF00006160563 fastq.gz 5.3 GB
EGAF00006165215 fastq.gz 38.3 GB
EGAF00006165216 fastq.gz 42.2 GB
EGAF00006165239 fastq.gz 38.3 GB
EGAF00006165240 fastq.gz 42.2 GB
EGAF00006165277 fastq.gz 38.2 GB
EGAF00006165278 fastq.gz 42.2 GB
EGAF00006165283 fastq.gz 38.2 GB
EGAF00006165284 fastq.gz 42.1 GB
EGAF00006176404 bam 7.7 GB
EGAF00006176405 bam 11.0 GB
EGAF00007412451 txt 130 Bytes
45 Files (908.0 GB)