WES and WGS data for HGSC patient derived cell lines and fresh frozen tumor samples from same patients
Sequencing data for three HGSC patients with patient derived cell lines. WES data for two patient derived cell line samples and matched blood control samples. Fresh frozen tumor samples of two patients with WES or WGS sequencing data.
- 9 samples
- DAC: EGAC00001001760
- Technologies: HiSeq X Ten, Illumina HiSeq 2000
- DS DUO:0000007 (version: 2019-01-07)disease specific researchThis data use permission indicates that use is allowed provided it is related to the specified disease.ModifiersMONDO:0004992
- US DUO:0000026 (version: 2019-01-07)user specific restrictionThis data use modifier indicates that use is limited to use by approved users.
- PS DUO:0000027 (version: 2019-01-07)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
- IS DUO:0000028 (version: 2019-01-07)institution specific restrictionThis data use modifier indicates that use is limited to use within an approved institution.
The data can only be used for cancer research that is inline with the research areas delineated in the patient consent. These include cancer biomarkers, prognostic factors, mechanisms behind the tumor evolution during treatment and treatment options. The data can also be used for validation of studies published by the contributing consortia (MUPETFaasi2, HERCULES, CHEMORESPONSE).
The data can only be used for cancer research that is inline with the research areas delineated in the patient consent. These include cancer biomarkers, prognostic factors, mechanisms behind the tumor evolution during treatment and treatment options. The data can also be used for validation of studies published by the contributing consortia (MUPETFaasi2, HERCULES, CHEMORESPONSE). See link for full description
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001006557 | Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00007019793 | bam | 6.6 GB | ||
| EGAF00007019794 | bam | 6.1 GB | ||
| EGAF00007019795 | bam | 7.5 GB | ||
| EGAF00007019796 | bam | 783.9 GB | ||
| EGAF00007019797 | bam | 675.1 GB | ||
| EGAF00007019798 | bam | 5.3 GB | ||
| EGAF00007019799 | bam | 7.3 GB | ||
| EGAF00007019800 | bam | 8.3 GB | ||
| EGAF00007019801 | bam | 5.2 GB | ||
| 9 Files (1.5 TB) | ||||