Columbia Alzheimer's sample (white matter)
The Columbia Alzheimer’s dataset (white matter) consists of 24 white matter individuals (12 controls, 12 cases). A total of 12,000 estimated cells from each sample were loaded on the 10x Single Cell Next GEM G Chip. cDNA libraries were prepared using the Chromium Single Cell 3’ Library and Gel Bead v3 kit according to the manufacturer’s instructions. cDNA libraries were sequenced using the Illumina NovaSeq 6000 System and NovaSeq 6000 S2 Reagent Kit v1.5 (100 cycles), aiming at a sequencing depth of minimum 30K reads/nucleus.
- 24 samples
- DAC: EGAC00001002730
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001006345 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00006214251 | fastq.gz | 2.4 GB | ||
| EGAF00006214252 | fastq.gz | 6.6 GB | ||
| EGAF00006214253 | fastq.gz | 2.5 GB | ||
| EGAF00006214254 | fastq.gz | 7.2 GB | ||
| EGAF00006214255 | fastq.gz | 2.5 GB | ||
| EGAF00006214256 | fastq.gz | 7.6 GB | ||
| EGAF00006214257 | fastq.gz | 2.5 GB | ||
| EGAF00006214258 | fastq.gz | 7.5 GB | ||
| EGAF00006214259 | fastq.gz | 2.5 GB | ||
| EGAF00006214260 | fastq.gz | 7.2 GB | ||
| EGAF00006214261 | fastq.gz | 3.1 GB | ||
| EGAF00006214262 | fastq.gz | 9.2 GB | ||
| EGAF00006214263 | fastq.gz | 2.8 GB | ||
| EGAF00006214264 | fastq.gz | 8.1 GB | ||
| EGAF00006214265 | fastq.gz | 2.2 GB | ||
| EGAF00006214266 | fastq.gz | 6.2 GB | ||
| EGAF00006214267 | fastq.gz | 2.3 GB | ||
| EGAF00006214268 | fastq.gz | 6.9 GB | ||
| EGAF00006214269 | fastq.gz | 2.5 GB | ||
| EGAF00006214270 | fastq.gz | 7.1 GB | ||
| EGAF00006214271 | fastq.gz | 2.6 GB | ||
| EGAF00006214272 | fastq.gz | 7.6 GB | ||
| EGAF00006214273 | fastq.gz | 2.5 GB | ||
| EGAF00006214274 | fastq.gz | 7.2 GB | ||
| EGAF00006214275 | fastq.gz | 2.3 GB | ||
| EGAF00006214276 | fastq.gz | 6.2 GB | ||
| EGAF00006214277 | fastq.gz | 2.2 GB | ||
| EGAF00006214278 | fastq.gz | 6.4 GB | ||
| EGAF00006214279 | fastq.gz | 2.6 GB | ||
| EGAF00006214280 | fastq.gz | 7.5 GB | ||
| EGAF00006214281 | fastq.gz | 2.1 GB | ||
| EGAF00006214282 | fastq.gz | 6.1 GB | ||
| EGAF00006214283 | fastq.gz | 2.7 GB | ||
| EGAF00006214284 | fastq.gz | 7.6 GB | ||
| EGAF00006214285 | fastq.gz | 2.5 GB | ||
| EGAF00006214286 | fastq.gz | 7.1 GB | ||
| EGAF00006214287 | fastq.gz | 2.8 GB | ||
| EGAF00006214288 | fastq.gz | 8.0 GB | ||
| EGAF00006214289 | fastq.gz | 2.6 GB | ||
| EGAF00006214290 | fastq.gz | 7.7 GB | ||
| EGAF00006214291 | fastq.gz | 2.8 GB | ||
| EGAF00006214292 | fastq.gz | 7.8 GB | ||
| EGAF00006214293 | fastq.gz | 2.4 GB | ||
| EGAF00006214294 | fastq.gz | 7.2 GB | ||
| EGAF00006214295 | fastq.gz | 2.5 GB | ||
| EGAF00006214296 | fastq.gz | 7.7 GB | ||
| EGAF00006214297 | fastq.gz | 2.6 GB | ||
| EGAF00006214298 | fastq.gz | 7.3 GB | ||
| 48 Files (235.8 GB) | ||||