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MTM-HD - fibroblast RNAseq

MTM-HD - fibroblast RNAseq. 57 samples from controls, pre-HD and early-HD patients.

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MTM-HD DAA

Table of Content Section I: Contact and Project Information 2 Section II: harmonised Data Access Agreement (hDAA) 5 Terms and Conditions 8 Agreement 12 Appendix I 13 Acknowledgments 14   Section I: Contact and Project Information A. Data Recipient (including contact details) Please ensure that a full postal address and a valid Institutional email address are included Name: Institution’s Legal Name: Institutional Postal Address: Institutional E-mail Address: Website of the Institution: B. Authorised Representative of the Data Recipient Name: Position: Affiliation: Institutional Postal Address: Institutional E-mail Address: C. Data Controller(s) (including contact details) Please ensure that a full postal address and a valid Institutional email address are included Name: Institution’s Legal Name: Institutional Postal Address: Institutional E-mail Address: Website of the Institution: D. Authorised Representative of the Data Controller(s) Name: Position: Affiliation: Institutional Postal Address: Institutional E-mail Address: E. Title of the Proposed Research Project F. Research Project (Scientific Abstract): Please provide a clear description of the Project, its stakeholders, its main question and its relevance to the research domain addressed, its specific aims, and duration. Note that any use of the Data, if approved, must fall under the framework of the described Project (300 words max): G. Research Credentials Please provide a list of three Publications, relevant to the Project description, of which the Data Recipient is author or co-author, and, also, attach their (Data Recipient’s) short CV. If the Data Recipient has not authored or co-authored three relevant Publications, please describe their relevant expertise or experience in no more than 150 words; also, notify how the research project will be carried out (e.g. available funding, infrastructure and so on). Section II: harmonised Data Access Agreement (hDAA) Definitions GDPR: This hDAA makes both parties compliant with the Regulation (EU) 2016/679 of the European Parliament and of the Council, that is, the General Data Protection Regulation (herein referred to as the ‘GDPR’). Data: Refers to controlled access data (the Data). Under this Agreement, the Data is pseudonymised. Data Access/Transfer: Refers to an Institution’s right to request access to the Data and retrieve them from the Data Controller’s Institution upon approval of this hDAA by the corresponding DAC within the Data Controller’s Institution. Data Handling: Refers to an Institution’s ability to analyse and manipulate the Data within its own computer network. Data Controller(s): Refers to an Institution, responsible for the generation of the Data and its pseudonymisation. A key-code permitting relinkage to Data Subjects is kept by the Data Controller(s). Data Subject: Refers to any individual who is the source of any Data covered by this Agreement. Data Recipient (‘You’): Refers to the Institution who requests Access to the Data through this Agreement. Authorised Personnel: The individual(s) at the Institution requesting Access to the Data. Research Project: The Project for which You have requested Access to the Data. Publications: Refers, without limitation, to any and all articles published in print journals, electronic journals, reviews, books, posters, and other written and verbal presentations of Research that have been accepted by peer review. EU-STANDS4PM: This hDAA was developed by the EU-STANDS4PM, http://www/eu-stands4pm.eu/ Terms and Conditions In signing this Agreement: 1. You, the Data Recipient, agree to only use the Data for the Purpose of the Project. 2. You agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. You undertake not to use or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. 3. You agree not to attempt to identify Data Subjects. 4. You and your Authorised Personnel agree to take into consideration any usage restrictions (if any), stemming from consent, i.e. the appropriate lawful basis for processing the Data, as well as any usage restrictions stemming from any applicable internal policies of your Institution. 5. You agree that in handling this Data You will follow an up-to-date information technology (IT) policy that must include, at a minimum, the following items: a. Logging and auditing of Access to the Data and to the computer network; b. Password protection to computer network and/or strong data encryption; c. Virus and malware protection to computers on the computer network; d. Secure backup procedure; 6. You acknowledge that Access to the Data is granted for the duration of the Project described in Section I, as well as any new Project under the same research field or area. Any use of the Data for a Project of another research field or area will need to be approved under a new Agreement. 7. You recognize that nothing in this Agreement shall operate to transfer to You any intellectual property rights to the Data. 8. You agree not to make intellectual property claims on the Data and not to use intellectual property protection in ways that would prevent or block Access to, or use of, any element of the Data. 9. You can elect to perform further Research that would add intellectual and resource capital to the Data, and decide to obtain intellectual property rights on these downstream discoveries. In this case, You agree to implement licensing policies that will not obstruct further Research, following the Organisation for Economic Co-operation and Development Guidelines. 10. You agree that the Research Project 1) bears no legal responsibility for the accuracy or comprehensiveness of the Data; 2) accepts no liability for indirect, consequential, or incidental damages or losses arising from use of the Data; and 3) bears no responsibility for the further analysis or interpretation of these Data over and above that published by the Controller(s). 11. You agree to hold the Data Subject(s) and Data Controller(s) harmless and to defend and indemnify all these parties against all liabilities, demands, damages, expenses, and losses arising out of Your use for any Purpose of the Data. 12. You agree to a moratorium on publishing global analyses of the dataset until the Data Controller(s) have published their own global analysis or twelve (12) months, the maximum, have passed from the time the Data were deposited, whichever occurs first. You acknowledge that prompt publication or public disclosure of the results of the Research Project is encouraged. You also agree that by publishing Your global analyses of the Data, you will not disclose any results generated from the Data. 13. You agree to acknowledge the contribution of the Data Controller(s) in all oral and written presentations, disclosures, and Publications resulting from all analyses of the Data. 14. You agree to use the Data in Your laboratory. Any Authorised Personnel shall work under Your direct supervision. You agree to distribute a copy of these terms to the Authorised Personnel. 15. You may not transfer any information included in the Data to anyone unless specifically designated in the Research Project, or by prior specific or general written authorisation of the Data Controller(s) responsible for the generation of the original Data in each case. 16. You may not transfer the Data itself to anyone outside the Institution, unless the Controller(s) has (have) approved such transfer and its terms in writing. 17. Should You wish to share the Data with an external collaborator, the external collaborator must complete a separate Data Access Agreement. 18. You shall ensure that ‘all’ who have Access to the Data, namely You and Your Authorised Personnel, will be listed out, and are made aware and be bound by the terms of this Agreement. You remain solely and fully responsible for Your Authorised Personnel’s non-compliance with the provision of the Agreement and/or applicable laws. 19. In case of a breach of security resulting from ‘accidental’ use of Data by You and Your Authorised Personnel, which leads to disclosure of Data, then You must report this to Data Controller(s) within 72 hours maximum, and follow any relevant rule as provided by the GDPR. 20. In case of a ‘non-accidental or minor’ breach of hDAA by You You will further be required to destroy any Data held. 21. You accept that this Agreement will terminate immediately upon ‘any’ breach by You, or its termination (see Section I). 22. You endeavour to settle any dispute with the Data Controller(s) amicably. If you are unable to reach an Agreement, you will meet and negotiate in good faith in an effort to resolve the issue. If the issue has not been resolved within a reasonable period (e.g. 30 calendar days), you are both entitled to submit it for resolution by an arbitrator. 23. Further, the language of the proceedings will be ‘English’ if not otherwise agreed. The award of the arbitration will be final and binding upon the parties concerned. 24. This Agreement (and any dispute, controversy, proceedings, or claim of whatever nature arising out of it or its formation) shall be interpreted, governed by and construed in accordance with the Laws of England and Wales, and shall be subject to the exclusive jurisdiction of the English Courts.   Agreement I have read, understood and agree to abide by the terms and conditions stipulated in this Data Access Agreement. Data Recipient or Authorised Representative of the Data Recipient: Name: Title and position (if applicable): Affiliation (if applicable): Signature: _____________________________________Date: _____________________ Data Controller(s) or Authorised Representative of the Data Controller(s): Name: Title and position (if applicable): Affiliation (if applicable): Signature: _____________________________________Date: ______________________ Appendix I

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006472 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00006623269 fastq.gz 2.7 GB
EGAF00006623270 fastq.gz 2.8 GB
EGAF00006623271 fastq.gz 2.7 GB
EGAF00006623272 fastq.gz 2.8 GB
EGAF00006623273 fastq.gz 2.7 GB
EGAF00006623274 fastq.gz 2.9 GB
EGAF00006623275 fastq.gz 2.7 GB
EGAF00006623276 fastq.gz 2.7 GB
EGAF00006623277 fastq.gz 2.7 GB
EGAF00006623278 fastq.gz 2.9 GB
EGAF00006623279 fastq.gz 2.7 GB
EGAF00006623280 fastq.gz 2.8 GB
EGAF00006623281 fastq.gz 2.7 GB
EGAF00006623282 fastq.gz 2.8 GB
EGAF00006623283 fastq.gz 2.7 GB
EGAF00006623284 fastq.gz 2.8 GB
EGAF00006623285 fastq.gz 2.7 GB
EGAF00006623286 fastq.gz 2.8 GB
EGAF00006623287 fastq.gz 2.0 GB
EGAF00006623288 fastq.gz 2.1 GB
EGAF00006623289 fastq.gz 2.0 GB
EGAF00006623290 fastq.gz 2.0 GB
EGAF00006623291 fastq.gz 2.6 GB
EGAF00006623292 fastq.gz 2.7 GB
EGAF00006623293 fastq.gz 2.8 GB
EGAF00006623294 fastq.gz 2.9 GB
EGAF00006623295 fastq.gz 2.0 GB
EGAF00006623296 fastq.gz 2.1 GB
EGAF00006623297 fastq.gz 1.9 GB
EGAF00006623298 fastq.gz 2.0 GB
EGAF00006623299 fastq.gz 2.1 GB
EGAF00006623300 fastq.gz 2.1 GB
EGAF00006623301 fastq.gz 2.8 GB
EGAF00006623302 fastq.gz 2.9 GB
EGAF00006623303 fastq.gz 1.9 GB
EGAF00006623304 fastq.gz 2.0 GB
EGAF00006623305 fastq.gz 2.1 GB
EGAF00006623306 fastq.gz 2.2 GB
EGAF00006623307 fastq.gz 2.7 GB
EGAF00006623308 fastq.gz 2.8 GB
EGAF00006623309 fastq.gz 2.0 GB
EGAF00006623310 fastq.gz 2.1 GB
EGAF00006623311 fastq.gz 2.0 GB
EGAF00006623312 fastq.gz 2.0 GB
EGAF00006623313 fastq.gz 2.8 GB
EGAF00006623314 fastq.gz 2.9 GB
EGAF00006623315 fastq.gz 2.1 GB
EGAF00006623316 fastq.gz 2.1 GB
EGAF00006623317 fastq.gz 2.6 GB
EGAF00006623318 fastq.gz 2.8 GB
EGAF00006623319 fastq.gz 2.8 GB
EGAF00006623320 fastq.gz 3.0 GB
EGAF00006623321 fastq.gz 2.8 GB
EGAF00006623322 fastq.gz 2.9 GB
EGAF00006623323 fastq.gz 2.6 GB
EGAF00006623324 fastq.gz 2.7 GB
EGAF00006623325 fastq.gz 2.7 GB
EGAF00006623326 fastq.gz 2.8 GB
EGAF00006623327 fastq.gz 2.7 GB
EGAF00006623328 fastq.gz 2.8 GB
EGAF00006623329 fastq.gz 2.8 GB
EGAF00006623330 fastq.gz 2.9 GB
EGAF00006623331 fastq.gz 2.6 GB
EGAF00006623332 fastq.gz 2.7 GB
EGAF00006623333 fastq.gz 2.7 GB
EGAF00006623334 fastq.gz 2.8 GB
EGAF00006623335 fastq.gz 2.8 GB
EGAF00006623336 fastq.gz 2.9 GB
EGAF00006623337 fastq.gz 2.7 GB
EGAF00006623338 fastq.gz 2.8 GB
EGAF00006623339 fastq.gz 2.8 GB
EGAF00006623340 fastq.gz 2.9 GB
EGAF00006623341 fastq.gz 2.6 GB
EGAF00006623342 fastq.gz 2.7 GB
EGAF00006623343 fastq.gz 2.8 GB
EGAF00006623344 fastq.gz 2.9 GB
EGAF00006623345 fastq.gz 2.8 GB
EGAF00006623346 fastq.gz 2.9 GB
EGAF00006623347 fastq.gz 2.7 GB
EGAF00006623348 fastq.gz 2.7 GB
EGAF00006623349 fastq.gz 2.7 GB
EGAF00006623350 fastq.gz 2.8 GB
EGAF00006623351 fastq.gz 2.7 GB
EGAF00006623352 fastq.gz 2.7 GB
EGAF00006623353 fastq.gz 1.9 GB
EGAF00006623354 fastq.gz 2.0 GB
EGAF00006623355 fastq.gz 2.6 GB
EGAF00006623356 fastq.gz 2.7 GB
EGAF00006623357 fastq.gz 2.7 GB
EGAF00006623358 fastq.gz 2.8 GB
EGAF00006623359 fastq.gz 2.8 GB
EGAF00006623360 fastq.gz 2.9 GB
EGAF00006623361 fastq.gz 2.6 GB
EGAF00006623362 fastq.gz 2.7 GB
EGAF00006623363 fastq.gz 1.9 GB
EGAF00006623364 fastq.gz 2.0 GB
EGAF00006623365 fastq.gz 2.7 GB
EGAF00006623366 fastq.gz 2.7 GB
EGAF00006623367 fastq.gz 2.8 GB
EGAF00006623368 fastq.gz 2.9 GB
EGAF00006623369 fastq.gz 1.9 GB
EGAF00006623370 fastq.gz 2.0 GB
EGAF00006623371 fastq.gz 2.7 GB
EGAF00006623372 fastq.gz 2.7 GB
EGAF00006623373 fastq.gz 2.7 GB
EGAF00006623374 fastq.gz 2.8 GB
EGAF00006623375 fastq.gz 2.7 GB
EGAF00006623376 fastq.gz 2.8 GB
EGAF00006623377 fastq.gz 2.8 GB
EGAF00006623378 fastq.gz 2.9 GB
EGAF00006623379 fastq.gz 2.7 GB
EGAF00006623380 fastq.gz 2.8 GB
EGAF00006623381 fastq.gz 2.7 GB
EGAF00006623382 fastq.gz 2.8 GB
114 Files (295.4 GB)