Transcriptome profiling of three giant cell tumour of bone (GCTB) cell lines
This dataset contains RNA-seq data of giant cell tumour of bone (GCTB) cell lines (n=3). Cell lines consist of neoplastic "stromal" cells harboring a heterozygous H3F3A p.G34W mutation. RNA-seq was performed on the BGISEQ-500 platform (PE100) and uploaded data contains fastq files, vcf files, and gene expression values (TPM). Cell lines, data generation, and data analysis are described in the following publication: Venneker et al., Histone deacetylase inhibitors as a therapeutic strategy to eliminate neoplastic “stromal” cells from giant cell tumors of bone, 2022.
- 3 samples
- DAC: EGAC00001002775
- Technology: unspecified
DAC for transcriptome profiling of three giant cell tumour of bone cell lines.
When using this data, please cite the original article in which this dataset was first described: Venneker et al., Histone deacetylase inhibitors as a therapeutic strategy to eliminate neoplastic “stromal” cells from giant cell tumors of bone, 2022.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00006530566 | 1658230224221 | 3.6 GB | ||
| EGAF00006530567 | 1658231123437 | 4.2 GB | ||
| EGAF00006530568 | 1658229321723 | 7.2 MB | ||
| EGAF00006530569 | 1658232025838 | 3.7 GB | ||
| EGAF00006530570 | 1658231123437 | 4.2 GB | ||
| EGAF00006530571 | 1658229321724 | 7.3 MB | ||
| EGAF00006530572 | 1658231123437 | 3.5 GB | ||
| EGAF00006530573 | 1658231123437 | 3.8 GB | ||
| EGAF00006530574 | 1658229321724 | 7.4 MB | ||
| EGAF00006530575 | 1658229321723 | 2.7 MB | ||
| 10 Files (23.1 GB) | ||||