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Illumina RNA-Seq paired of 10 different tumor samples from the Master program (H021)

Fastq files of paired RNA-Seq of 10 different tumor samples, for which Nanopore and Illumina sequencing was compared. Illumina sequencing was carried out with HiSeq4000 or HiSeq X-Ten using the Illumina TruSeq stranded mRNA Kit.

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Data Transfer Agreement for the German Cancer Research Center

To request access to the dataset please start a Data Access Request via the EGA DAC Portal. You will receive a HIPO DACO Info Form by email to collect information about the request, which has to be filled completely and signed by your PI. Your request will be evaluated by the responsible Data Access Committee (DAC) and our Data protection department (and innovation management if required). As soon as a positive decision is made, you will be provided with a data transfer agreement (DTA). After the DTA has been fully signed, access to the requested data is granted. To ensure that the process can be completed as quickly as possible, please note the following points: 1. The request in the EGA portal must be made by the responsible PI. 2. The information in the EGA portal must match the information on the HIPO DACO Info Form. In particular, the email address and the requested data sets must match. It is also important that all requested data sets are also listed on the HIPO DACO Info Form. For-profit companies are charged a fee per request.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00006210010 1655118921828 3.9 GB
EGAF00006210011 1655118921829 4.4 GB
EGAF00006210012 1655118921828 3.1 GB
EGAF00006210013 1655118921829 3.4 GB
EGAF00006210014 1655118921829 4.2 GB
EGAF00006210015 1655118921828 4.6 GB
EGAF00006210016 1655118921828 4.1 GB
EGAF00006210017 1655118921830 4.6 GB
EGAF00006210018 1655121621223 38.0 GB
EGAF00006210019 1655121621223 42.3 GB
EGAF00006210020 1655118921830 5.2 GB
EGAF00006210021 1655118921828 5.8 GB
EGAF00006210022 1655122521020 43.2 GB
EGAF00006210023 1655121621223 50.0 GB
EGAF00006210024 1655118921829 3.6 GB
EGAF00006210025 1655118921828 3.8 GB
EGAF00006210026 1655118921828 5.0 GB
EGAF00006210027 1655118921829 5.5 GB
EGAF00006210028 1655121621223 38.9 GB
EGAF00006210029 1655122521019 46.7 GB
EGAF00006210030 1655118921828 3.6 GB
EGAF00006210031 1655118921828 3.9 GB
EGAF00006210032 1655118921828 3.7 GB
EGAF00006210033 1655118921828 3.9 GB
EGAF00006210381 1655163024783 3.1 GB
EGAF00006210382 1655163921968 3.4 GB
EGAF00006210383 1655163921968 3.7 GB
EGAF00006210384 1655163921968 4.0 GB
28 Files (349.6 GB)