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Fragment ends of circulating microbial DNA as signatures for infectious diseases

Consists of 88 cases

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This agreement governs the terms and conditions on which access will be granted to users of the sequencing and genotyping data generated by The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group (CNARG).

The CUHK Circulating Nucleic Acids Research Group Data Access Agreement This agreement governs the terms and conditions on which access will be granted to users of the sequencing and genotyping data generated by The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group (CNARG). The terms and conditions of access set out in this agreement apply both to the User and the User’s Institution (both as defined below). User is referred to within the agreement as “You” and the term “Your” will be construed accordingly. By signing this agreement, You agree to be bound by the terms and conditions of access set out in this agreement. Definitions: Group means The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group (CNARG). Data means all and any human genetic data obtained by User or User’s Institution from the Group via the European Genome-phenome Archive. Data Subject means a person, who has been informed of the purpose for which the Data is held and has given his/her informed consent thereto. In the event that the Data Subject is legally incapable of giving an informed consent, such consent has been given by his/her legal guardian. User means a researcher whose User’s Institution has previously completed this Data Access Agreement and has received acknowledgement of its acceptance by the Group. Data Access Committee means a committee assigned by the Group for reviewing and approving the data access application of the User. The committee consists of three or more investigators from the Group. Publications means, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written, electronic, graphical, photographic, recorded (including oral recordings), and verbal presentations of research. User’s Institution means the organisation at which the User is employed, affiliated or enrolled. Terms and Conditions: By signing this agreement: 1. You agree to use the Data only for the advancement of medical and scientific research, according to the consent given by Data Subjects. 2. You agree not to use the Data for the creation of products for sale or for any commercial purpose. 3. You agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. 4. You agree not to transfer or disclose the Data, in whole or in part, or any information/material derived from the Data, to others, except as reasonably necessary for data/safety monitoring or programme management. Should You wish to share the Data with a collaborator within the same User’s Institution, the collaborator must make a separate application for access to the Data. 5. You agree to use the Data for the approved purpose and project described in your application only; use of the Data for a new purpose or project will require a new application and approval. 6. You agree to acknowledge in any work based in whole or in part on the Data, the publications from which the Data derives, the version of the Data, and the role of the Group. The wordings of the acknowledgement are “This study makes use of data generated by The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group, as reported by Chan et al in Clinical Chemistry (doi:10.1373/clinchem.2012.196014). 7. You accept that the Group, the original data creators, depositors or copyright holders, or the funders of the Group: a) make no warranties or representations with respect to the Data, including but not limited to its fitness for purpose, accuracy or comprehensiveness, the continued access to the Data without interruption; and b) accept no liability for any direct, indirect, consequential, special or incidental, damages or losses arising from or in connection with the use of the Data or this agreement. 8. You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that reproduction, except as reasonably required to carry out Your research with the Data in accordance with the approved purpose referred to in paragraph 5 above, or sale of all or part of the Data in any form is not permitted. 9. You agree that nothing in this agreement shall operate to transfer to You or to the User’s Institution any intellectual property rights relating to the Data. 10. You accept that this agreement will be terminated immediately by the Group without notice upon breach of any terms of this agreement by You and You agree to destroy any Data held when required. 11. You accept that it may be necessary for the Group or its appointed agent to alter the terms of this agreement from time to time in order to address new concerns. In this event, the Group or its appointed agent will to inform You of any changes. You agree that Your continued use of the Data shall be deemed to represent your consent to any revised terms of the Agreement. 12. You agree that you will submit a report to the Data Access Committee, if requested, on completion of the agreed purpose. The Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User’s Institution. 13. You accept that the Data is protected by the privacy law in the relevant jurisdiction and that You are responsible for ensuring Your use of the Data is in compliance with any such applicable law. Notwithstanding the above, nothing in this agreement shall limit the rights of the Data Subjects under the Personal Data (Privacy) Ordinance (Cap 486) in Hong Kong. The Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures in countries that have no national laws comparable to that which pertain in the Personal Data (Privacy) Ordinance in Hong Kong. 14. This agreement shall be construed, interpreted and governed by the laws of Hong Kong Special Administrative Region.   For and on behalf of User: Name of Applicant(s): _____________________________________ _____________________________________ _____________________________________ _____________________________________ Signature of Applicant(s): _____________________________________ _____________________________________ _____________________________________ _____________________________________ Date: _____________________________________ For and on behalf of User’s Institution: Signature of Institutional or Administrative Authority: ______________________________________ Print name: ______________________________________ User’s Institution: ______________________________________ Date: ¬¬¬¬¬¬¬¬¬¬¬¬¬¬¬¬¬¬¬______________________________________ WHEN SUBMITTING THIS DOCUMENT, PLEASE INCLUDE ALL PAGES OF THE AGREEMENT WITH THIS SIGNATURE PAGE

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00006206944 1654741821779 3.7 GB
EGAF00006206945 1654746347469 3.7 GB
EGAF00006206946 1654746347469 4.1 GB
EGAF00006206947 1654742723251 4.2 GB
EGAF00006206948 1654751722734 4.7 GB
EGAF00006206949 1654750822425 4.9 GB
EGAF00006206950 1654745429775 4.4 GB
EGAF00006206951 1654746347469 4.5 GB
EGAF00006206952 1654742723251 3.8 GB
EGAF00006206953 1654748141112 3.9 GB
EGAF00006206954 1654746347469 4.2 GB
EGAF00006206955 1654743622121 4.4 GB
EGAF00006206956 1654742723251 3.5 GB
EGAF00006206957 1654745429775 3.5 GB
EGAF00006206958 1654744522330 3.7 GB
EGAF00006206959 1654747244891 3.8 GB
EGAF00006206960 1654744522331 3.8 GB
EGAF00006206961 1654754426967 4.0 GB
EGAF00006206962 1654756222354 4.1 GB
EGAF00006206963 1654743622121 4.2 GB
EGAF00006206964 1654749023103 5.3 GB
EGAF00006206965 1654746347469 5.5 GB
EGAF00006206966 1654747244891 4.8 GB
EGAF00006206967 1654750822425 4.9 GB
EGAF00006206968 1654743622121 4.7 GB
EGAF00006206969 1654748141112 4.9 GB
EGAF00006206970 1654748141112 3.8 GB
EGAF00006206971 1654748141112 3.9 GB
EGAF00006206972 1654754426967 4.3 GB
EGAF00006206973 1654748141112 4.4 GB
EGAF00006206974 1654745429775 3.4 GB
EGAF00006206975 1654746347469 3.5 GB
EGAF00006206976 1654748141114 4.3 GB
EGAF00006206977 1654751722734 4.5 GB
EGAF00006206978 1654746347469 4.7 GB
EGAF00006206979 1654756222354 4.8 GB
EGAF00006206980 1654749023103 4.0 GB
EGAF00006206981 1654747244890 4.1 GB
EGAF00006206982 1654747244890 4.7 GB
EGAF00006206983 1654751722734 4.9 GB
EGAF00006206984 1654747244890 2.0 GB
EGAF00006206985 1654746347469 2.0 GB
EGAF00006206986 1654748141112 3.6 GB
EGAF00006206987 1654746347469 3.6 GB
EGAF00006206988 1654747244891 4.0 GB
EGAF00006206989 1654749922673 4.0 GB
EGAF00006206990 1654744522331 2.6 GB
EGAF00006206991 1654747244890 2.6 GB
EGAF00006206992 1654747244890 3.3 GB
EGAF00006206993 1654749023103 3.4 GB
EGAF00006206994 1654749023103 3.0 GB
EGAF00006206995 1654748141112 3.1 GB
EGAF00006206996 1654750822426 3.1 GB
EGAF00006206997 1654750822425 3.2 GB
EGAF00006206998 1654751722733 4.3 GB
EGAF00006206999 1654746347469 4.4 GB
EGAF00006207000 1654748141112 2.1 GB
EGAF00006207001 1654748141112 2.1 GB
EGAF00006207002 1654749922673 4.7 GB
EGAF00006207003 1654749922673 4.6 GB
EGAF00006207004 1654754426968 3.3 GB
EGAF00006207005 1654749922673 3.2 GB
EGAF00006207006 1654747244890 1.9 GB
EGAF00006207007 1654748141112 2.0 GB
EGAF00006207008 1654747244890 2.8 GB
EGAF00006207009 1654755323153 2.9 GB
EGAF00006207010 1654747244890 4.4 GB
EGAF00006207011 1654751722733 4.6 GB
EGAF00006207012 1654747244890 2.7 GB
EGAF00006207013 1654750822426 2.7 GB
EGAF00006207014 1654749023103 3.2 GB
EGAF00006207015 1654751722733 3.2 GB
EGAF00006207016 1654746347469 9.2 MB
EGAF00006207017 1654746347469 9.4 MB
EGAF00006207018 1654746347469 10.0 MB
EGAF00006207019 1654746347469 8.8 MB
EGAF00006207020 1654746347469 20.3 MB
EGAF00006207021 1654746347469 19.4 MB
EGAF00006207022 1654746347469 12.8 MB
EGAF00006207023 1654746347469 12.6 MB
EGAF00006207024 1654746347470 19.9 MB
EGAF00006207025 1654747244890 20.3 MB
EGAF00006207026 1654746347470 11.8 MB
EGAF00006207027 1654747244890 8.9 MB
EGAF00006207028 1654747244890 21.6 MB
EGAF00006207029 1654747244891 17.4 MB
EGAF00006207030 1654747244891 22.3 MB
EGAF00006207031 1654747244891 19.8 MB
EGAF00006207032 1654747244891 15.4 MB
EGAF00006207033 1654747244891 15.7 MB
EGAF00006207034 1654747244891 12.9 MB
EGAF00006207035 1654747244891 12.8 MB
EGAF00006207036 1654747244891 23.5 MB
EGAF00006207037 1654748141112 23.8 MB
EGAF00006207038 1654747244891 9.5 MB
EGAF00006207039 1654747244891 9.4 MB
EGAF00006207040 1654747244891 17.0 MB
EGAF00006207041 1654747244891 17.9 MB
EGAF00006207042 1654747244891 22.8 MB
EGAF00006207043 1654748141112 25.0 MB
EGAF00006207044 1654747244891 10.1 MB
EGAF00006207045 1654747244891 8.5 MB
EGAF00006207046 1654747244891 23.9 MB
EGAF00006207047 1654747244891 19.8 MB
EGAF00006207048 1654758921392 19.6 MB
EGAF00006207049 1654748141112 18.2 MB
EGAF00006207050 1654748141112 14.4 MB
EGAF00006207051 1654748141112 14.4 MB
EGAF00006207052 1654748141112 16.0 MB
EGAF00006207053 1654748141112 15.6 MB
EGAF00006207054 1654748141112 20.0 MB
EGAF00006207055 1654748141112 20.5 MB
EGAF00006207056 1654748141112 15.1 MB
EGAF00006207057 1654748141112 15.7 MB
EGAF00006207058 1654749023104 26.2 MB
EGAF00006207059 1654748141112 27.5 MB
EGAF00006207060 1654748141112 22.5 MB
EGAF00006207061 1654748141112 22.5 MB
EGAF00006207062 1654748141112 11.4 MB
EGAF00006207063 1654748141112 11.9 MB
EGAF00006207064 1654749023104 24.3 MB
EGAF00006207065 1654758921392 21.9 MB
EGAF00006207066 1654748141112 25.5 MB
EGAF00006207067 1654749023103 25.0 MB
EGAF00006207068 1654748141112 12.1 MB
EGAF00006207069 1654748141114 12.4 MB
EGAF00006207070 1654749023103 22.9 MB
EGAF00006207071 1654748141114 23.7 MB
EGAF00006207072 1654749023104 21.1 MB
EGAF00006207073 1654749023104 21.3 MB
EGAF00006207074 1654748141112 22.9 MB
EGAF00006207075 1654749023104 23.1 MB
EGAF00006207076 1654749023103 10.7 MB
EGAF00006207077 1654749023103 9.9 MB
EGAF00006207078 1654749023103 15.0 MB
EGAF00006207079 1654749023103 14.0 MB
EGAF00006207080 1654755323153 3.1 GB
EGAF00006207081 1654755323153 3.2 GB
EGAF00006207082 1654757122081 4.3 GB
EGAF00006207083 1654756222354 4.2 GB
EGAF00006207084 1654750822426 4.3 GB
EGAF00006207085 1654750822425 4.2 GB
EGAF00006207086 1654751722735 3.3 GB
EGAF00006207087 1654750822426 3.2 GB
EGAF00006207088 1654754426967 3.6 GB
EGAF00006207089 1654752624255 3.7 GB
EGAF00006207090 1654755323153 4.4 GB
EGAF00006207091 1654757122081 4.5 GB
EGAF00006207092 1654753526736 4.2 GB
EGAF00006207093 1654750822425 4.3 GB
EGAF00006207094 1654752624255 4.1 GB
EGAF00006207095 1654752624255 4.1 GB
EGAF00006207096 1654753526736 4.4 GB
EGAF00006207097 1654765221346 4.4 GB
EGAF00006207098 1654752624255 3.7 GB
EGAF00006207099 1654755323153 3.6 GB
EGAF00006207100 1654754426967 3.1 GB
EGAF00006207101 1654756222354 3.0 GB
EGAF00006207102 1654757122081 4.5 GB
EGAF00006207103 1654765221345 4.3 GB
EGAF00006207104 1654753526736 1.6 GB
EGAF00006207105 1654754426967 1.5 GB
EGAF00006207106 1654761621186 4.2 GB
EGAF00006207107 1654756222354 4.0 GB
EGAF00006207108 1654758021444 2.0 GB
EGAF00006207109 1654754426967 2.0 GB
EGAF00006207110 1654754426967 2.5 GB
EGAF00006207111 1654755323153 2.5 GB
EGAF00006207112 1654758921392 4.6 GB
EGAF00006207113 1654757122081 4.5 GB
EGAF00006207114 1654765221346 11.2 GB
EGAF00006207115 1654759821316 12.0 GB
EGAF00006207116 1654754426967 4.0 GB
EGAF00006207117 1654757122081 4.1 GB
EGAF00006207118 1654753526736 4.0 GB
EGAF00006207119 1654756222354 4.1 GB
176 Files (437.0 GB)