Dataset for GIST-RNA

Rare cancer sequencing data of 50 runs in tumor/control pairs, which were uploaded to umbrella studies. The sequencing was always paired

34 samples
DAC: EGAC00001000452
Technologies: HiSeq X Ten, Illumina HiSeq 2000, Illumina HiSeq 2500, Illumina HiSeq 4000

Access Policy2 Studies Files

Metadata

Request Access

US DUO:0000026 (version: 2019-01-07)user specific restrictionThis data use modifier indicates that use is limited to use by approved users.

Data Transfer Agreement for the German Cancer Research Center

To request access to the dataset please start a Data Access Request via the EGA DAC Portal. You will receive a HIPO DACO Info Form by email to collect information about the request, which has to be filled completely and signed by your PI. Your request will be evaluated by the responsible Data Access Committee (DAC) and our Data protection department (and innovation management if required). As soon as a positive decision is made, you will be provided with a data transfer agreement (DTA). After the DTA has been fully signed, access to the requested data is granted. To ensure that the process can be completed as quickly as possible, please note the following points: 1. The request in the EGA portal must be made by the responsible PI. 2. The information in the EGA portal must match the information on the HIPO DACO Info Form. In particular, the email address and the requested data sets must match. It is also important that all requested data sets are also listed on the HIPO DACO Info Form. For-profit companies are charged a fee per request.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001004813	Comprehensive Genomic and Transcriptomic Analysis of Rare Cancers for Guiding of Therapy (H021)	Other
EGAS00001005145	H021-Master Umbrella study2 (not to be released)	Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF00005114454	fastq.gz	6.1 GB
EGAF00005114455	fastq.gz	6.7 GB
EGAF00005114506	fastq.gz	2.6 GB
EGAF00005114507	fastq.gz	2.8 GB
EGAF00005114574	fastq.gz	2.7 GB
EGAF00005114575	fastq.gz	2.9 GB
EGAF00005199419	fastq.gz	8.7 GB
EGAF00005199420	fastq.gz	9.6 GB
EGAF00005199678	fastq.gz	3.4 GB
EGAF00005199679	fastq.gz	3.6 GB
EGAF00005199680	fastq.gz	3.5 GB
EGAF00005199681	fastq.gz	3.7 GB
EGAF00005199844	fastq.gz	4.0 GB
EGAF00005199845	fastq.gz	4.1 GB
EGAF00005200186	fastq.gz	3.2 GB
EGAF00005200187	fastq.gz	3.5 GB
EGAF00005200188	fastq.gz	3.3 GB
EGAF00005200189	fastq.gz	3.5 GB
EGAF00005203586	fastq.gz	2.9 GB
EGAF00005203587	fastq.gz	3.0 GB
EGAF00005203588	fastq.gz	2.9 GB
EGAF00005203589	fastq.gz	3.0 GB
EGAF00006151362	fastq.gz	4.6 GB
EGAF00006151363	fastq.gz	4.7 GB
EGAF00006151384	fastq.gz	2.5 GB
EGAF00006151385	fastq.gz	2.6 GB
EGAF00006151390	fastq.gz	2.5 GB
EGAF00006151391	fastq.gz	2.6 GB
EGAF00006151428	fastq.gz	40.3 GB
EGAF00006151429	fastq.gz	47.5 GB
EGAF00006153289	fastq.gz	2.3 GB
EGAF00006153290	fastq.gz	2.4 GB
EGAF00006153293	fastq.gz	3.1 GB
EGAF00006153294	fastq.gz	3.2 GB
EGAF00006153295	fastq.gz	3.7 GB
EGAF00006153296	fastq.gz	3.8 GB
EGAF00006153311	fastq.gz	2.3 GB
EGAF00006153312	fastq.gz	2.4 GB
EGAF00006153433	fastq.gz	3.8 GB
EGAF00006153434	fastq.gz	3.9 GB
EGAF00006153457	fastq.gz	2.4 GB
EGAF00006153458	fastq.gz	2.5 GB
EGAF00006153505	fastq.gz	2.4 GB
EGAF00006153506	fastq.gz	2.5 GB
EGAF00006153523	fastq.gz	3.8 GB
EGAF00006153524	fastq.gz	3.9 GB
EGAF00006153567	fastq.gz	2.8 GB
EGAF00006153568	fastq.gz	2.9 GB
EGAF00006153581	fastq.gz	3.1 GB
EGAF00006153582	fastq.gz	3.2 GB
EGAF00006153587	fastq.gz	2.8 GB
EGAF00006153588	fastq.gz	2.9 GB
EGAF00006153617	fastq.gz	3.9 GB
EGAF00006153618	fastq.gz	4.0 GB
EGAF00006153639	fastq.gz	3.1 GB
EGAF00006153640	fastq.gz	3.5 GB
EGAF00006153673	fastq.gz	3.0 GB
EGAF00006153674	fastq.gz	2.8 GB
EGAF00006153705	fastq.gz	3.9 GB
EGAF00006153706	fastq.gz	4.4 GB
EGAF00006153733	fastq.gz	2.3 GB
EGAF00006153734	fastq.gz	2.6 GB
EGAF00006153753	fastq.gz	2.7 GB
EGAF00006153754	fastq.gz	3.0 GB
EGAF00006153757	fastq.gz	3.3 GB
EGAF00006153758	fastq.gz	3.6 GB
EGAF00006153871	fastq.gz	3.4 GB
EGAF00006153872	fastq.gz	3.8 GB
EGAF00006153887	fastq.gz	3.1 GB
EGAF00006153888	fastq.gz	3.4 GB
EGAF00006153911	fastq.gz	2.2 GB
EGAF00006153912	fastq.gz	2.4 GB
EGAF00006153915	fastq.gz	3.1 GB
EGAF00006153916	fastq.gz	3.5 GB
EGAF00006153965	fastq.gz	3.0 GB
EGAF00006153966	fastq.gz	3.2 GB
EGAF00006154017	fastq.gz	3.3 GB
EGAF00006154018	fastq.gz	3.8 GB
EGAF00006154045	fastq.gz	3.2 GB
EGAF00006154046	fastq.gz	3.4 GB
EGAF00006154233	fastq.gz	3.2 GB
EGAF00006154234	fastq.gz	3.6 GB
EGAF00006154235	fastq.gz	3.2 GB
EGAF00006154236	fastq.gz	3.5 GB
EGAF00006154291	fastq.gz	3.1 GB
EGAF00006154292	fastq.gz	3.3 GB
EGAF00006154347	fastq.gz	5.4 GB
EGAF00006154348	fastq.gz	5.6 GB
EGAF00006154349	fastq.gz	5.3 GB
EGAF00006154350	fastq.gz	5.4 GB
EGAF00006154373	fastq.gz	6.3 GB
EGAF00006154374	fastq.gz	6.7 GB
EGAF00006154375	fastq.gz	6.4 GB
EGAF00006154376	fastq.gz	7.0 GB
EGAF00006158529	fastq.gz	38.4 GB
EGAF00006158530	fastq.gz	42.7 GB
EGAF00006165322	fastq.gz	2.8 GB
EGAF00006165323	fastq.gz	3.1 GB
EGAF00006165324	fastq.gz	3.8 GB
EGAF00006165325	fastq.gz	4.5 GB
EGAF00006167238	txt	151 Bytes
101 Files (516.8 GB)