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Mucosal 16S sequencing data

16S-V4 rRNA gene sequence data for intestinal biopsies from NCT02749630 trial participants. Biopsies from patients were collected at screening, day 30, and day 85 and prepared for 16SV4 rRNA gene sequencing.

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Genentech Data Access Agreement for Academic Institutions

GENENTECH DATA ACCESS COMMITTEE DATA ACCESS AGREEMENT This Data Access Agreement (“Agreement”) between Genentech, Inc. (“Genentech”) and User andUser Institution (as defined below) governs the terms on which access will be granted to thegenotype data obtained from Genentech. In signing this Agreement, User and User Institution agree to be bound by the terms and conditions of access set out in this Agreement. For the sake of clarity, the terms of access set out in this Agreement shall govern activities conducted by the User and the User Institution (as defined below). User Institution and User are referred to within the Agreement as “You” and “Your” for convenience only. Definitions: gRED means Genentech Research and Early Development. Data means all and any human genetic data generated by gRED and requested by User through submission of an Application for Access to Genotype Data and obtained from Genentech under the terms of this Agreement. Data Subject means a person, who has been informed of the purpose for which the Data is held and has given his/her informed consent thereto. User means a researcher who has requested Data by submitting an Application for Access to Genotype Data to gRED and whose User Institution has previously completed this Data Access Agreement with respect to such Data and has received acknowledgement of its acceptance. Publications means, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. User Institution means the organization at which the User is employed, affiliated or enrolled. Genentech Data Access Committee means members of the gRED organization that are responsible for making the data access decisions for the genotype data generated by gRED. Terms and Conditions: In signing this Agreement: 1. You agree to use the Data only for the advancement of medical research. 2. You agree not to use the data for the creation of products for sale or for any commercial purpose. 3. You agree to preserve, at all times, the confidentiality of Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy.DSC: Academic Data Access Agreement vMar2021 1 4. You agree not to attempt to link the Data provided under this Agreement to any other data source on the same samples or to link the Data to any person or otherwise identify any Data Subject from the Data. 5. You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or programmanagement. Should You wish to share the Data with a collaborator outside the same Institution, the third party must make a separate application for access to the Data. 6. You agree to use the Data for the approved purpose and project described in your Application for Access to Raw Exome Sequencing and/or RNA Sequencing Data; use of the Data for a new purpose or project will require a new application and approval. You agree to restrict your use of the Data to the analysis of somatic mutations and/or gene expression level only; use of these data to infer genotype is not permitted. 7. You agree that publication of Your purpose, project, and results is restricted for a one (1) year period starting from the publication date of the Genentech publication referencing the Data deposit. You will be free to publish the results of the research using the Data for the approved purpose after the one (1) year period has expired. You will not publish the Data, but will refer to the original Data deposit by Genentech and agree to acknowledge in any such publication that the research makes use of Data generated by Genentech. 8. You accept that Genentech: (a) bears no legal responsibility for the accuracy or comprehensiveness of the Data; and (b) accepts no liability for indirect, consequential, or incidental, damages or losses arising from use of the Data, or from the unavailability of, or break in access to, the Data for whatever reason. 9. You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted. 10. You recognize that nothing in this Agreement shall operate to transfer to the User Institution any intellectual property rights relating to the Data. 11. You agree that You will submit a report to the Genentech Data Access Committee, if requested, on completion of the approved purpose. The Genentech Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User Institution. 12. (a) You agree to use the Data in accordance with all applicable laws, including but not limited to applicable data privacy laws. (b)The Genentech Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures. 13. This Agreement shall be effective as of the date of the last party to sign below (“Effective Date”) and shall terminate three (3) years after the Effective Date, unless terminated sooner pursuant to Section 14 below. Upon termination, You will be required to destroy any Data held. 14. You accept that this Agreement will terminate immediately upon any breach of this Agreement by You. Either party may terminate this Agreement upon thirty (30) days written notice for any reason. The following Sections of this Agreement shall survive its expiration or termination:DSC: Academic Data Access Agreement vMar2021 2 Sections 1 – 10, 12(a), and 14-17 15. Nothing herein shall create any association, partnership, joint venture, fiduciary duty or the relation of principal and agent between the parties hereto, it being understood that each party is acting as an independent contractor, and neither party shall have the authority to bind the other or the other’s representatives in any way. 16. Except as required by law or permitted under Section 7, neither party shall use or refer to this Agreement in the public media, or use the names or marks of the other party without express prior written permission. 17. This Agreement may be executed by the parties hereto in separate counterparts, each of which when so executed and delivered shall be deemed an original, but all such counterparts shall together constitute one and the same agreement. The parties agree that execution of this Agreement by exchanging facsimile, PDF, or e-Signature (as defined below) signatures shall have the same legal force and effect as the exchange of original signatures. Pursuant to this Agreement, e-Signatures shall mean a signature that consists of one or more letters, characters, numbers or other symbols in digital form incorporated in, attached to or associated with the electronic document, that (a) is unique to the person making the signature; (b) the technology or process used to make the signature is under the sole control of the person making the signature; (b) the technology or process can be used to identify the person using the technology or process; and (d) the electronic signature can be linked with an electronic document in such a way that it can be used to determine whether the electronic document has been changed since the electronic signature was incorporated in, attached to or associated with the electronic document. The written form shall be required to make changes to this clause as well. IN WITNESS WHEREOF, the parties have caused this Agreement to be executed by their respective duly authorized representatives as set forth below. Genentech, Inc. For and on behalf of User Institution: (Institutional or Administrative Authority) Signature: Signature: Print Name: Print Name: Title: Title: Date: Date: Read and acknowledged by User/Applicant: Signature: Print Name: Title: Date:DSC: Academic Data Access Agreement vMar2021 3

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006172 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00006172566 fastq.gz 83.0 kB
EGAF00006172567 fastq.gz 97.2 kB
EGAF00006172568 fastq.gz 174.2 kB
EGAF00006172569 fastq.gz 214.0 kB
EGAF00006172570 fastq.gz 95.3 kB
EGAF00006172571 fastq.gz 112.8 kB
EGAF00006172572 fastq.gz 218.7 kB
EGAF00006172573 fastq.gz 288.5 kB
EGAF00006172574 fastq.gz 282.5 kB
EGAF00006172575 fastq.gz 369.2 kB
EGAF00006172576 fastq.gz 736.8 kB
EGAF00006172577 fastq.gz 1.0 MB
EGAF00006172578 fastq.gz 4.0 MB
EGAF00006172579 fastq.gz 4.9 MB
EGAF00006172580 fastq.gz 5.2 MB
EGAF00006172581 fastq.gz 6.6 MB
EGAF00006172582 fastq.gz 4.2 MB
EGAF00006172583 fastq.gz 5.5 MB
EGAF00006172584 fastq.gz 7.0 MB
EGAF00006172585 fastq.gz 8.8 MB
EGAF00006172586 fastq.gz 4.2 MB
EGAF00006172587 fastq.gz 5.8 MB
EGAF00006172588 fastq.gz 6.2 MB
EGAF00006172589 fastq.gz 7.4 MB
EGAF00006172590 fastq.gz 5.7 MB
EGAF00006172591 fastq.gz 6.9 MB
EGAF00006172592 fastq.gz 5.7 MB
EGAF00006172593 fastq.gz 6.7 MB
EGAF00006172594 fastq.gz 1.5 MB
EGAF00006172595 fastq.gz 1.8 MB
EGAF00006172596 fastq.gz 5.3 MB
EGAF00006172597 fastq.gz 6.4 MB
EGAF00006172598 fastq.gz 3.7 MB
EGAF00006172599 fastq.gz 4.7 MB
EGAF00006172600 fastq.gz 7.4 MB
EGAF00006172601 fastq.gz 9.3 MB
EGAF00006172602 fastq.gz 6.0 MB
EGAF00006172603 fastq.gz 7.5 MB
EGAF00006172604 fastq.gz 6.1 MB
EGAF00006172605 fastq.gz 8.6 MB
EGAF00006172606 fastq.gz 3.3 MB
EGAF00006172607 fastq.gz 4.0 MB
EGAF00006172608 fastq.gz 5.9 MB
EGAF00006172609 fastq.gz 7.2 MB
EGAF00006172610 fastq.gz 1.8 MB
EGAF00006172611 fastq.gz 2.6 MB
EGAF00006172612 fastq.gz 10.4 MB
EGAF00006172613 fastq.gz 12.6 MB
EGAF00006172614 fastq.gz 4.2 MB
EGAF00006172615 fastq.gz 5.1 MB
EGAF00006172616 fastq.gz 4.6 MB
EGAF00006172617 fastq.gz 5.8 MB
EGAF00006172618 fastq.gz 3.9 MB
EGAF00006172619 fastq.gz 4.9 MB
EGAF00006172620 fastq.gz 7.3 MB
EGAF00006172621 fastq.gz 8.8 MB
EGAF00006172622 fastq.gz 8.0 MB
EGAF00006172623 fastq.gz 9.7 MB
EGAF00006172624 fastq.gz 514.4 kB
EGAF00006172625 fastq.gz 644.2 kB
EGAF00006172626 fastq.gz 7.0 MB
EGAF00006172627 fastq.gz 8.9 MB
EGAF00006172628 fastq.gz 5.8 MB
EGAF00006172629 fastq.gz 6.9 MB
EGAF00006172630 fastq.gz 7.4 MB
EGAF00006172631 fastq.gz 9.0 MB
EGAF00006172632 fastq.gz 8.1 MB
EGAF00006172633 fastq.gz 9.8 MB
EGAF00006172634 fastq.gz 8.5 MB
EGAF00006172635 fastq.gz 10.9 MB
EGAF00006172636 fastq.gz 86.6 kB
EGAF00006172637 fastq.gz 107.6 kB
EGAF00006172638 fastq.gz 6.3 MB
EGAF00006172639 fastq.gz 8.4 MB
EGAF00006172640 fastq.gz 2.2 MB
EGAF00006172641 fastq.gz 2.8 MB
EGAF00006172642 fastq.gz 5.6 MB
EGAF00006172643 fastq.gz 6.8 MB
EGAF00006172644 fastq.gz 5.0 MB
EGAF00006172645 fastq.gz 5.8 MB
EGAF00006172646 fastq.gz 6.5 MB
EGAF00006172647 fastq.gz 8.0 MB
EGAF00006172648 fastq.gz 1.8 MB
EGAF00006172649 fastq.gz 2.5 MB
EGAF00006172650 fastq.gz 6.0 MB
EGAF00006172651 fastq.gz 7.6 MB
EGAF00006172652 fastq.gz 39.6 MB
EGAF00006172653 fastq.gz 49.0 MB
EGAF00006172654 fastq.gz 4.5 MB
EGAF00006172655 fastq.gz 5.7 MB
EGAF00006172656 fastq.gz 5.6 MB
EGAF00006172657 fastq.gz 8.9 MB
EGAF00006172658 fastq.gz 10.8 MB
EGAF00006172659 fastq.gz 16.5 MB
EGAF00006172660 fastq.gz 1.4 MB
EGAF00006172661 fastq.gz 1.8 MB
EGAF00006172662 fastq.gz 9.9 MB
EGAF00006172663 fastq.gz 13.0 MB
EGAF00006172664 fastq.gz 6.1 MB
EGAF00006172665 fastq.gz 7.7 MB
EGAF00006172666 fastq.gz 2.2 MB
EGAF00006172667 fastq.gz 3.2 MB
EGAF00006172668 fastq.gz 8.4 MB
EGAF00006172669 fastq.gz 10.1 MB
EGAF00006172670 fastq.gz 5.0 MB
EGAF00006172671 fastq.gz 6.4 MB
EGAF00006172672 fastq.gz 6.8 MB
EGAF00006172673 fastq.gz 8.5 MB
EGAF00006172674 fastq.gz 5.2 MB
EGAF00006172675 fastq.gz 6.6 MB
EGAF00006172676 fastq.gz 5.3 MB
EGAF00006172677 fastq.gz 7.0 MB
EGAF00006172678 fastq.gz 6.8 MB
EGAF00006172679 fastq.gz 8.5 MB
EGAF00006172680 fastq.gz 4.1 MB
EGAF00006172681 fastq.gz 5.4 MB
EGAF00006172682 fastq.gz 35.4 kB
EGAF00006172683 fastq.gz 44.0 kB
EGAF00006172684 fastq.gz 7.9 MB
EGAF00006172685 fastq.gz 9.7 MB
EGAF00006172686 fastq.gz 1.1 MB
EGAF00006172687 fastq.gz 1.4 MB
EGAF00006172688 fastq.gz 5.0 MB
EGAF00006172689 fastq.gz 6.2 MB
EGAF00006172690 fastq.gz 3.7 MB
EGAF00006172691 fastq.gz 4.4 MB
EGAF00006172692 fastq.gz 5.9 MB
EGAF00006172693 fastq.gz 7.5 MB
EGAF00006172694 fastq.gz 7.5 MB
EGAF00006172695 fastq.gz 9.4 MB
EGAF00006172696 fastq.gz 6.4 MB
EGAF00006172697 fastq.gz 8.4 MB
EGAF00006172698 fastq.gz 4.3 MB
EGAF00006172699 fastq.gz 5.3 MB
EGAF00006172700 fastq.gz 8.4 MB
EGAF00006172701 fastq.gz 10.6 MB
EGAF00006172702 fastq.gz 7.0 MB
EGAF00006172703 fastq.gz 8.7 MB
EGAF00006172704 fastq.gz 2.3 MB
EGAF00006172705 fastq.gz 3.0 MB
EGAF00006172706 fastq.gz 6.1 MB
EGAF00006172707 fastq.gz 7.8 MB
EGAF00006172708 fastq.gz 11.9 MB
EGAF00006172709 fastq.gz 15.6 MB
EGAF00006172710 fastq.gz 8.3 MB
EGAF00006172711 fastq.gz 12.5 MB
EGAF00006172712 fastq.gz 6.9 MB
EGAF00006172713 fastq.gz 8.4 MB
EGAF00006172714 fastq.gz 6.3 MB
EGAF00006172715 fastq.gz 8.2 MB
EGAF00006172716 fastq.gz 5.4 MB
EGAF00006172717 fastq.gz 6.8 MB
EGAF00006172718 fastq.gz 9.8 MB
EGAF00006172719 fastq.gz 12.0 MB
EGAF00006172720 fastq.gz 6.8 MB
EGAF00006172721 fastq.gz 8.6 MB
EGAF00006172722 fastq.gz 6.3 MB
EGAF00006172723 fastq.gz 7.8 MB
EGAF00006172724 fastq.gz 4.7 MB
EGAF00006172725 fastq.gz 5.8 MB
EGAF00006172726 fastq.gz 5.4 MB
EGAF00006172727 fastq.gz 7.3 MB
EGAF00006172728 fastq.gz 5.1 MB
EGAF00006172729 fastq.gz 6.7 MB
EGAF00006172730 fastq.gz 5.8 MB
EGAF00006172731 fastq.gz 7.3 MB
EGAF00006172732 fastq.gz 5.4 MB
EGAF00006172733 fastq.gz 7.0 MB
EGAF00006172734 fastq.gz 1.6 MB
EGAF00006172735 fastq.gz 2.2 MB
EGAF00006172736 fastq.gz 4.8 MB
EGAF00006172737 fastq.gz 6.1 MB
EGAF00006172738 fastq.gz 7.9 MB
EGAF00006172739 fastq.gz 10.5 MB
EGAF00006172740 fastq.gz 7.1 MB
EGAF00006172741 fastq.gz 9.1 MB
EGAF00006172742 fastq.gz 6.8 MB
EGAF00006172743 fastq.gz 8.8 MB
EGAF00006172744 fastq.gz 51.0 MB
EGAF00006172745 fastq.gz 62.7 MB
EGAF00006172746 fastq.gz 3.8 MB
EGAF00006172747 fastq.gz 4.8 MB
EGAF00006172748 fastq.gz 8.2 MB
EGAF00006172749 fastq.gz 10.1 MB
EGAF00006172750 fastq.gz 1.3 MB
EGAF00006172751 fastq.gz 1.7 MB
EGAF00006172752 fastq.gz 74.0 MB
EGAF00006172753 fastq.gz 91.6 MB
EGAF00006172754 fastq.gz 6.3 MB
EGAF00006172755 fastq.gz 7.9 MB
EGAF00006172756 fastq.gz 4.1 MB
EGAF00006172757 fastq.gz 5.6 MB
EGAF00006172758 fastq.gz 7.5 MB
EGAF00006172759 fastq.gz 9.5 MB
EGAF00006172760 fastq.gz 8.2 MB
EGAF00006172761 fastq.gz 10.4 MB
EGAF00006172762 fastq.gz 4.4 MB
EGAF00006172763 fastq.gz 5.6 MB
EGAF00006172764 fastq.gz 6.3 MB
EGAF00006172765 fastq.gz 7.7 MB
EGAF00006172766 fastq.gz 108.6 MB
EGAF00006172767 fastq.gz 135.9 MB
EGAF00006172768 fastq.gz 5.2 MB
EGAF00006172769 fastq.gz 6.3 MB
EGAF00006172770 fastq.gz 6.3 MB
EGAF00006172771 fastq.gz 8.4 MB
EGAF00006172772 fastq.gz 1.1 MB
EGAF00006172773 fastq.gz 1.4 MB
EGAF00006172774 fastq.gz 5.3 MB
EGAF00006172775 fastq.gz 6.7 MB
EGAF00006172776 fastq.gz 4.7 MB
EGAF00006172777 fastq.gz 5.9 MB
EGAF00006172778 fastq.gz 69.8 MB
EGAF00006172779 fastq.gz 85.4 MB
EGAF00006172780 fastq.gz 7.9 MB
EGAF00006172781 fastq.gz 10.3 MB
EGAF00006172782 fastq.gz 5.3 MB
EGAF00006172783 fastq.gz 6.5 MB
EGAF00006172784 fastq.gz 7.1 MB
EGAF00006172785 fastq.gz 8.5 MB
EGAF00006172786 fastq.gz 6.8 MB
EGAF00006172787 fastq.gz 8.3 MB
EGAF00006172788 fastq.gz 6.3 MB
EGAF00006172789 fastq.gz 7.6 MB
EGAF00006172790 fastq.gz 120.2 MB
EGAF00006172791 fastq.gz 157.5 MB
EGAF00006172792 fastq.gz 4.8 MB
EGAF00006172793 fastq.gz 6.2 MB
EGAF00006172794 fastq.gz 7.1 MB
EGAF00006172795 fastq.gz 8.5 MB
EGAF00006172796 fastq.gz 6.0 MB
EGAF00006172797 fastq.gz 7.6 MB
EGAF00006172798 fastq.gz 12.2 MB
EGAF00006172799 fastq.gz 15.7 MB
EGAF00006172800 fastq.gz 6.1 MB
EGAF00006172801 fastq.gz 7.8 MB
EGAF00006172802 fastq.gz 2.7 MB
EGAF00006172803 fastq.gz 3.5 MB
EGAF00006172804 fastq.gz 4.2 MB
EGAF00006172805 fastq.gz 5.8 MB
EGAF00006172806 fastq.gz 6.6 MB
EGAF00006172807 fastq.gz 8.6 MB
EGAF00006172808 fastq.gz 7.1 MB
EGAF00006172809 fastq.gz 9.1 MB
EGAF00006172810 fastq.gz 439.2 kB
EGAF00006172811 fastq.gz 553.2 kB
EGAF00006172812 fastq.gz 6.1 MB
EGAF00006172813 fastq.gz 7.8 MB
EGAF00006172814 fastq.gz 4.5 MB
EGAF00006172815 fastq.gz 5.6 MB
EGAF00006172816 fastq.gz 8.0 MB
EGAF00006172817 fastq.gz 10.7 MB
EGAF00006172818 fastq.gz 4.9 MB
EGAF00006172819 fastq.gz 6.3 MB
EGAF00006172820 fastq.gz 6.9 MB
EGAF00006172821 fastq.gz 8.7 MB
EGAF00006172822 fastq.gz 4.8 MB
EGAF00006172823 fastq.gz 6.1 MB
EGAF00006172824 fastq.gz 6.9 MB
EGAF00006172825 fastq.gz 8.7 MB
EGAF00006172826 fastq.gz 4.4 MB
EGAF00006172827 fastq.gz 5.4 MB
EGAF00006172828 fastq.gz 1.7 MB
EGAF00006172829 fastq.gz 2.5 MB
264 Files (2.6 GB)