Stromal and dendritic cells from lymph nodes: single-cell RNA-seq
Although cross-species transcriptional analysis has been generated for DCs, transcriptomic conservation between mouse and human FRCs at single-cell resolution has been unclear. To test whether GREM1+ FRCs might also play a role in DC homeostasis in humans, we performed scRNA-seq of CD45–PDPN+ stromal cells, as well as CD45+CD11c+ immune cells from healthy human LNs of three human donors. Data was generated using the 10x platform.
- 6 samples
- DAC: EGAC00001000055
- Technology: Illumina HiSeq 4000
Genentech Human LN Single-cell RNA-seq
”Human lymph node Single-cell RNA-seq was performed on sorted populations (CD45+CD11C+, CD45-PDPN+) from 3 donors”
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001006211 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00006146996 | fastq.gz | 7.4 GB | ||
| EGAF00006146997 | fastq.gz | 26.7 GB | ||
| EGAF00006146998 | fastq.gz | 7.1 GB | ||
| EGAF00006146999 | fastq.gz | 24.8 GB | ||
| EGAF00006147000 | fastq.gz | 7.4 GB | ||
| EGAF00006147001 | fastq.gz | 26.7 GB | ||
| EGAF00006147002 | fastq.gz | 6.9 GB | ||
| EGAF00006147003 | fastq.gz | 24.5 GB | ||
| EGAF00006147004 | fastq.gz | 7.0 GB | ||
| EGAF00006147005 | fastq.gz | 24.1 GB | ||
| EGAF00006147006 | fastq.gz | 7.2 GB | ||
| EGAF00006147007 | fastq.gz | 25.7 GB | ||
| 12 Files (195.4 GB) | ||||