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WGBS of CD14 monocytes dataset of covid19 patients from Quebec, Canada

this dataset contains the raw data generated for CD14 monocytes WGBSof 7 covid19 hospitalized patients sampled at various time points (Admission, Day 5 and Day 15) in total 15 biospecimen are available. WGBS libraries have been sequenced on Illumina NovaSeq 6000.

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These data are under the McGill EMC data policy

These data are under the McGill EMC data policy (https://epigenomesportal.ca/edcc/data_access.html) Our data is available both from the EGA sequence archives. Raw sequence data (fastq files) are archived with the EGA. Access is available upon successful application to the DAC. Our EGA Study page reports datasets that can be obtained from the EGA following an application to the DAC. This list is accessible here: https://www.ebi.ac.uk/ega/studies/EGAS00001005468. Acknowledgment and citation We ask that all use of data, be acknowledged as follows in the methods section of manuscripts, if possible, or elsewhere in the main text of the manuscript: This research used data shared available from the European Genome-phenome Archive of the European Bioinformatics Institute (accession numbers: study EGAS00001005468 and dataset(s) EGAD00...). Please also cite the source of the data in any manuscript based on its analysis, as follows: A systems biology approach identifies candidate drugs to reduce mortality in severely ill COVID-19 patients, V.M. Fava, M. Bourgey, P.M. Nawarathna, M. Orlova, P. Cassart, D.C. Vinh, M.P. Cheng, G. Bourque, E. Schurr, D. Langlais

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00006139766 1649104740264 16.7 GB
EGAF00006139767 1649101020157 17.2 GB
EGAF00006139768 1649101920206 28.7 GB
EGAF00006139769 1649103300179 29.6 GB
EGAF00006139770 1649103480336 28.3 GB
EGAF00006139771 1649104200749 29.2 GB
EGAF00006139772 1649101860820 21.7 GB
EGAF00006139773 1649103480336 22.3 GB
EGAF00006139774 1649103300178 29.7 GB
EGAF00006139775 1649102880152 30.3 GB
EGAF00006139776 1649103660091 31.8 GB
EGAF00006139777 1649106960018 32.7 GB
EGAF00006139778 1649104500112 32.1 GB
EGAF00006139779 1649102280942 33.0 GB
EGAF00006139780 1649104980108 31.1 GB
EGAF00006139781 1649103840134 32.0 GB
EGAF00006139782 1649104140310 26.6 GB
EGAF00006139783 1649102820180 27.4 GB
EGAF00006139784 1649106420026 34.7 GB
EGAF00006139785 1649104860023 36.8 GB
EGAF00006139786 1649101620290 25.3 GB
EGAF00006139787 1649103180056 26.1 GB
EGAF00006139788 1649104800037 29.0 GB
EGAF00006139789 1649104140310 29.9 GB
EGAF00006139790 1649102400982 28.7 GB
EGAF00006139791 1649106420026 29.6 GB
EGAF00006139792 1649102400982 23.0 GB
EGAF00006139793 1649102160550 23.6 GB
EGAF00006146778 1650391921407 35.0 GB
EGAF00006146779 1649796120155 37.3 GB
30 Files (859.1 GB)