WGBS of CD14 monocytes dataset of covid19 patients from Quebec, Canada
this dataset contains the raw data generated for CD14 monocytes WGBSof 7 covid19 hospitalized patients sampled at various time points (Admission, Day 5 and Day 15) in total 15 biospecimen are available. WGBS libraries have been sequenced on Illumina NovaSeq 6000.
- 15 samples
- DAC: EGAC00001002631
- Technology: Illumina NovaSeq 6000
These data are under the McGill EMC data policy
These data are under the McGill EMC data policy (https://epigenomesportal.ca/edcc/data_access.html) Our data is available both from the EGA sequence archives. Raw sequence data (fastq files) are archived with the EGA. Access is available upon successful application to the DAC. Our EGA Study page reports datasets that can be obtained from the EGA following an application to the DAC. This list is accessible here: https://www.ebi.ac.uk/ega/studies/EGAS00001005468. Acknowledgment and citation We ask that all use of data, be acknowledged as follows in the methods section of manuscripts, if possible, or elsewhere in the main text of the manuscript: This research used data shared available from the European Genome-phenome Archive of the European Bioinformatics Institute (accession numbers: study EGAS00001005468 and dataset(s) EGAD00...). Please also cite the source of the data in any manuscript based on its analysis, as follows: A systems biology approach identifies candidate drugs to reduce mortality in severely ill COVID-19 patients, V.M. Fava, M. Bourgey, P.M. Nawarathna, M. Orlova, P. Cassart, D.C. Vinh, M.P. Cheng, G. Bourque, E. Schurr, D. Langlais
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001005468 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00006139766 | fastq.gz | 16.7 GB | ||
| EGAF00006139767 | fastq.gz | 17.2 GB | ||
| EGAF00006139768 | fastq.gz | 28.7 GB | ||
| EGAF00006139769 | fastq.gz | 29.6 GB | ||
| EGAF00006139770 | fastq.gz | 28.3 GB | ||
| EGAF00006139771 | fastq.gz | 29.2 GB | ||
| EGAF00006139772 | fastq.gz | 21.7 GB | ||
| EGAF00006139773 | fastq.gz | 22.3 GB | ||
| EGAF00006139774 | fastq.gz | 29.7 GB | ||
| EGAF00006139775 | fastq.gz | 30.3 GB | ||
| EGAF00006139776 | fastq.gz | 31.8 GB | ||
| EGAF00006139777 | fastq.gz | 32.7 GB | ||
| EGAF00006139778 | fastq.gz | 32.1 GB | ||
| EGAF00006139779 | fastq.gz | 33.0 GB | ||
| EGAF00006139780 | fastq.gz | 31.1 GB | ||
| EGAF00006139781 | fastq.gz | 32.0 GB | ||
| EGAF00006139782 | fastq.gz | 26.6 GB | ||
| EGAF00006139783 | fastq.gz | 27.4 GB | ||
| EGAF00006139784 | fastq.gz | 34.7 GB | ||
| EGAF00006139785 | fastq.gz | 36.8 GB | ||
| EGAF00006139786 | fastq.gz | 25.3 GB | ||
| EGAF00006139787 | fastq.gz | 26.1 GB | ||
| EGAF00006139788 | fastq.gz | 29.0 GB | ||
| EGAF00006139789 | fastq.gz | 29.9 GB | ||
| EGAF00006139790 | fastq.gz | 28.7 GB | ||
| EGAF00006139791 | fastq.gz | 29.6 GB | ||
| EGAF00006139792 | fastq.gz | 23.0 GB | ||
| EGAF00006139793 | fastq.gz | 23.6 GB | ||
| EGAF00006146778 | fastq.gz | 35.0 GB | ||
| EGAF00006146779 | fastq.gz | 37.3 GB | ||
| 30 Files (859.1 GB) | ||||