LCM-RNAseq on human lung macrophages
In the reported study, we employed Laser Capture Microdissection (LCM) for the transcriptome profiling of lung macrophages cells populations as a function of location within the healthy tissue. In detail, macrophage mini-bulks (100 cells each) were collected by LCM from 4 healthy human donors in 5 different locations of the airways (a total of 20 biopsies), including parenchyma (L1 – lower left lobe (LLL); L6 – 80% distance from LLL tip), trachea (L2), bronchi (L3 – 1st/2nd generation; L5 – 3rd/4th generation) and processed for RNA-seq.
- 38 samples
- DAC: EGAC00001002624
- Technology: Illumina NovaSeq 6000
Policy for the LCM-RNAseq on human lung macrophages dataset access
Access to data generated is made available by completing the data access agreement for review by the data access committee and will be granted exclusively to qualified investigators for appropriate use.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
Study ID | Study Title | Study Type |
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Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
ID | File Type | Size | Located in | |
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EGAF00006138691 | 1648649400446 | 206.4 MB | ||
EGAF00006138692 | 1648649281203 | 209.7 MB | ||
EGAF00006138693 | 1648649400446 | 263.2 MB | ||
EGAF00006138694 | 1648649228508 | 285.9 MB | ||
EGAF00006138695 | 1648649460185 | 268.1 MB | ||
EGAF00006138696 | 1648649228508 | 275.3 MB | ||
EGAF00006138697 | 1648649350855 | 319.9 MB | ||
EGAF00006138698 | 1648649281203 | 296.6 MB | ||
EGAF00006138699 | 1648649228508 | 177.7 MB | ||
EGAF00006138700 | 1648649173122 | 168.7 MB | ||
EGAF00006138701 | 1648649228508 | 450.3 MB | ||
EGAF00006138702 | 1648649350855 | 458.7 MB | ||
EGAF00006138703 | 1648649350855 | 434.7 MB | ||
EGAF00006138704 | 1648649228508 | 440.4 MB | ||
EGAF00006138705 | 1648649350855 | 341.4 MB | ||
EGAF00006138706 | 1648649228508 | 343.1 MB | ||
EGAF00006138707 | 1648649400446 | 138.6 MB | ||
EGAF00006138708 | 1648649173122 | 139.1 MB | ||
EGAF00006138709 | 1648649228508 | 207.7 MB | ||
EGAF00006138710 | 1648649350855 | 201.6 MB | ||
EGAF00006138711 | 1648649173122 | 130.2 MB | ||
EGAF00006138712 | 1648649173122 | 130.6 MB | ||
EGAF00006138713 | 1648649228508 | 199.9 MB | ||
EGAF00006138714 | 1648649228508 | 195.1 MB | ||
EGAF00006138715 | 1648649350855 | 247.0 MB | ||
EGAF00006138716 | 1648649281203 | 239.8 MB | ||
EGAF00006138717 | 1648649350855 | 304.7 MB | ||
EGAF00006138718 | 1648649228508 | 312.7 MB | ||
EGAF00006138719 | 1648649228508 | 168.0 MB | ||
EGAF00006138720 | 1648649228508 | 169.4 MB | ||
EGAF00006138721 | 1648649400446 | 332.9 MB | ||
EGAF00006138722 | 1648649460184 | 340.2 MB | ||
EGAF00006138723 | 1648649281203 | 260.5 MB | ||
EGAF00006138724 | 1648649350855 | 263.5 MB | ||
EGAF00006138725 | 1648649228508 | 256.8 MB | ||
EGAF00006138726 | 1648649281203 | 260.0 MB | ||
EGAF00006138727 | 1648649228508 | 263.2 MB | ||
EGAF00006138728 | 1648649228508 | 264.0 MB | ||
EGAF00006138729 | 1648649228508 | 319.1 MB | ||
EGAF00006138730 | 1648649228508 | 321.8 MB | ||
EGAF00006138731 | 1648649228508 | 202.8 MB | ||
EGAF00006138732 | 1648649281203 | 205.1 MB | ||
EGAF00006138733 | 1648649281203 | 391.9 MB | ||
EGAF00006138734 | 1648649281203 | 400.0 MB | ||
EGAF00006138735 | 1648649400446 | 927.6 MB | ||
EGAF00006138736 | 1648649460185 | 942.4 MB | ||
EGAF00006138737 | 1648649173122 | 144.7 MB | ||
EGAF00006138738 | 1648649228508 | 151.3 MB | ||
EGAF00006138739 | 1648649281203 | 217.8 MB | ||
EGAF00006138740 | 1648649281203 | 221.0 MB | ||
EGAF00006138741 | 1648649460185 | 206.5 MB | ||
EGAF00006138742 | 1648649350855 | 204.4 MB | ||
EGAF00006138743 | 1648649350855 | 279.6 MB | ||
EGAF00006138744 | 1648649281203 | 289.2 MB | ||
EGAF00006138745 | 1648649228508 | 225.6 MB | ||
EGAF00006138746 | 1648649281203 | 235.6 MB | ||
EGAF00006138747 | 1648649228507 | 165.8 MB | ||
EGAF00006138748 | 1648649281203 | 171.2 MB | ||
EGAF00006138749 | 1648649350855 | 217.0 MB | ||
EGAF00006138750 | 1648649350855 | 222.2 MB | ||
EGAF00006138751 | 1648649350855 | 255.5 MB | ||
EGAF00006138752 | 1648649400446 | 262.3 MB | ||
EGAF00006138753 | 1648649281203 | 153.9 MB | ||
EGAF00006138754 | 1648649350855 | 152.2 MB | ||
EGAF00006138755 | 1648649460185 | 342.2 MB | ||
EGAF00006138756 | 1648649400446 | 350.0 MB | ||
EGAF00006138757 | 1648649350855 | 276.2 MB | ||
EGAF00006138758 | 1648649281203 | 287.9 MB | ||
EGAF00006138759 | 1648649350855 | 192.3 MB | ||
EGAF00006138760 | 1648649281203 | 200.4 MB | ||
EGAF00006138761 | 1648649228507 | 239.3 MB | ||
EGAF00006138762 | 1648649281203 | 238.5 MB | ||
EGAF00006138763 | 1648649228507 | 249.2 MB | ||
EGAF00006138764 | 1648649350855 | 257.3 MB | ||
EGAF00006138765 | 1648649350855 | 299.7 MB | ||
EGAF00006138766 | 1648649281203 | 301.9 MB | ||
76 Files (20.7 GB) |