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LCM-RNAseq on human lung macrophages

In the reported study, we employed Laser Capture Microdissection (LCM) for the transcriptome profiling of lung macrophages cells populations as a function of location within the healthy tissue. In detail, macrophage mini-bulks (100 cells each) were collected by LCM from 4 healthy human donors in 5 different locations of the airways (a total of 20 biopsies), including parenchyma (L1 – lower left lobe (LLL); L6 – 80% distance from LLL tip), trachea (L2), bronchi (L3 – 1st/2nd generation; L5 – 3rd/4th generation) and processed for RNA-seq.

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Policy for the LCM-RNAseq on human lung macrophages dataset access

Access to data generated is made available by completing the data access agreement for review by the data access committee and will be granted exclusively to qualified investigators for appropriate use.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006168 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00006138691 fastq.gz 206.4 MB
EGAF00006138692 fastq.gz 209.7 MB
EGAF00006138693 fastq.gz 263.2 MB
EGAF00006138694 fastq.gz 285.9 MB
EGAF00006138695 fastq.gz 268.1 MB
EGAF00006138696 fastq.gz 275.3 MB
EGAF00006138697 fastq.gz 319.9 MB
EGAF00006138698 fastq.gz 296.6 MB
EGAF00006138699 fastq.gz 177.7 MB
EGAF00006138700 fastq.gz 168.7 MB
EGAF00006138701 fastq.gz 450.3 MB
EGAF00006138702 fastq.gz 458.7 MB
EGAF00006138703 fastq.gz 434.7 MB
EGAF00006138704 fastq.gz 440.4 MB
EGAF00006138705 fastq.gz 341.4 MB
EGAF00006138706 fastq.gz 343.1 MB
EGAF00006138707 fastq.gz 138.6 MB
EGAF00006138708 fastq.gz 139.1 MB
EGAF00006138709 fastq.gz 207.7 MB
EGAF00006138710 fastq.gz 201.6 MB
EGAF00006138711 fastq.gz 130.2 MB
EGAF00006138712 fastq.gz 130.6 MB
EGAF00006138713 fastq.gz 199.9 MB
EGAF00006138714 fastq.gz 195.1 MB
EGAF00006138715 fastq.gz 247.0 MB
EGAF00006138716 fastq.gz 239.8 MB
EGAF00006138717 fastq.gz 304.7 MB
EGAF00006138718 fastq.gz 312.7 MB
EGAF00006138719 fastq.gz 168.0 MB
EGAF00006138720 fastq.gz 169.4 MB
EGAF00006138721 fastq.gz 332.9 MB
EGAF00006138722 fastq.gz 340.2 MB
EGAF00006138723 fastq.gz 260.5 MB
EGAF00006138724 fastq.gz 263.5 MB
EGAF00006138725 fastq.gz 256.8 MB
EGAF00006138726 fastq.gz 260.0 MB
EGAF00006138727 fastq.gz 263.2 MB
EGAF00006138728 fastq.gz 264.0 MB
EGAF00006138729 fastq.gz 319.1 MB
EGAF00006138730 fastq.gz 321.8 MB
EGAF00006138731 fastq.gz 202.8 MB
EGAF00006138732 fastq.gz 205.1 MB
EGAF00006138733 fastq.gz 391.9 MB
EGAF00006138734 fastq.gz 400.0 MB
EGAF00006138735 fastq.gz 927.6 MB
EGAF00006138736 fastq.gz 942.4 MB
EGAF00006138737 fastq.gz 144.7 MB
EGAF00006138738 fastq.gz 151.3 MB
EGAF00006138739 fastq.gz 217.8 MB
EGAF00006138740 fastq.gz 221.0 MB
EGAF00006138741 fastq.gz 206.5 MB
EGAF00006138742 fastq.gz 204.4 MB
EGAF00006138743 fastq.gz 279.6 MB
EGAF00006138744 fastq.gz 289.2 MB
EGAF00006138745 fastq.gz 225.6 MB
EGAF00006138746 fastq.gz 235.6 MB
EGAF00006138747 fastq.gz 165.8 MB
EGAF00006138748 fastq.gz 171.2 MB
EGAF00006138749 fastq.gz 217.0 MB
EGAF00006138750 fastq.gz 222.2 MB
EGAF00006138751 fastq.gz 255.5 MB
EGAF00006138752 fastq.gz 262.3 MB
EGAF00006138753 fastq.gz 153.9 MB
EGAF00006138754 fastq.gz 152.2 MB
EGAF00006138755 fastq.gz 342.2 MB
EGAF00006138756 fastq.gz 350.0 MB
EGAF00006138757 fastq.gz 276.2 MB
EGAF00006138758 fastq.gz 287.9 MB
EGAF00006138759 fastq.gz 192.3 MB
EGAF00006138760 fastq.gz 200.4 MB
EGAF00006138761 fastq.gz 239.3 MB
EGAF00006138762 fastq.gz 238.5 MB
EGAF00006138763 fastq.gz 249.2 MB
EGAF00006138764 fastq.gz 257.3 MB
EGAF00006138765 fastq.gz 299.7 MB
EGAF00006138766 fastq.gz 301.9 MB
76 Files (20.7 GB)