fibroblast RNAseq from a GINS3 patient and two parents
RNA-seq was performed from 3 separate GINS3 patient fibroblast cultures and 1 replicate of fibroblasts derived from each of the two parents. RNA-seq libraries were generated with NEBNext Ultra II Directional RNA library prep for Illumina with NEBNext Poly(A) mRNA Magnetic Isolation Module (New England Biolabs) and sequenced on Illumina NextSeq500 with paired-end 150 bp read length. SIRV Set 3 (Lexogen) spike-ins were added. Two fastq files are provided for each RNAseq sample.
- 5 samples
- DAC: EGAC00001002540
- Technology: NextSeq 500
Data access policy for GINS3 RNAseq data
Data use code: - General Research Use (GRU) - Health/Medical/Biomedical (HMB) (not limited to a specific disease; no secondary code) Data use requirement: - Not-for-profit use only (NPU) - Future commercial use is prohibited (NCU)
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00005802610 | 1645046760176 | 5.0 GB | ||
| EGAF00005802611 | 1645044360141 | 5.2 GB | ||
| EGAF00005802612 | 1645045020110 | 4.1 GB | ||
| EGAF00005802613 | 1645046340057 | 4.2 GB | ||
| EGAF00005802614 | 1645046100130 | 5.1 GB | ||
| EGAF00005802615 | 1645047300517 | 5.2 GB | ||
| EGAF00005802616 | 1645050960062 | 6.5 GB | ||
| EGAF00005802617 | 1645044360141 | 6.8 GB | ||
| EGAF00005802618 | 1645046820528 | 4.5 GB | ||
| EGAF00005802619 | 1645043400190 | 4.6 GB | ||
| 10 Files (51.2 GB) | ||||