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Multi-region sequencing of RCC with VTT and metastasis using WES and RNAseq

This dataset contains multi-region sequencing of 16 RCC patients with venous tumor thrombus (VTT), 11 of which were either metastatic on diagnosis or recurred with metastasis. Whole exome sequencing is available for 94 samples across all 16 patients, including 1 matched normal sample per patient, 2-3 primary tumor samples per patient, 1-2 VTT samples per patient, and 0-3 metastasis samples per patient (metastatic lesions were only sampled for 8 of the 11 metastatic patients). RNAseq, generated by exome capture, is available for 67 samples across 12 patients, including 0-1 matched normal samples per patient, 3 primary tumor samples per patient, 0-1 VTT samples per patient, and 0-3 metastasis samples per patient (RNAseq was only available for 4 of the 8 patients from whom metastatic lesions were sampled).

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Please see provided URL: http://research-pub.gene.com/seqdata/dataAccess.html

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005744119 1639902840322 3.0 GB
EGAF00005744120 1639903081108 3.1 GB
EGAF00005744121 1639904280601 9.0 GB
EGAF00005744122 1639905600310 9.5 GB
EGAF00005744123 1639905122745 6.5 GB
EGAF00005744124 1639905240423 6.7 GB
EGAF00005744125 1639903560900 2.1 GB
EGAF00005744126 1639903443462 2.1 GB
EGAF00005744127 1639902242393 2.4 GB
EGAF00005744128 1639903201611 2.5 GB
EGAF00005744129 1639903560900 5.2 GB
EGAF00005744130 1639902900493 5.2 GB
EGAF00005744131 1639902180202 2.2 GB
EGAF00005744132 1639902362338 2.2 GB
EGAF00005744133 1639905660324 7.6 GB
EGAF00005744134 1639904761197 7.9 GB
EGAF00005744135 1639904280601 2.4 GB
EGAF00005744136 1639903681508 2.5 GB
EGAF00005744137 1639903740405 2.2 GB
EGAF00005744138 1639904220711 2.2 GB
EGAF00005744139 1639902242394 2.2 GB
EGAF00005744140 1639901940288 2.2 GB
EGAF00005744141 1639902000379 2.7 GB
EGAF00005744142 1639902900493 2.7 GB
EGAF00005744143 1639903627243 3.0 GB
EGAF00005744144 1639904761197 3.1 GB
EGAF00005744145 1639905900143 10.5 GB
EGAF00005744146 1639906920295 11.0 GB
EGAF00005744147 1639904610664 2.8 GB
EGAF00005744148 1639904162978 2.9 GB
EGAF00005744149 1639903560900 5.4 GB
EGAF00005744150 1639904220711 5.4 GB
EGAF00005744151 1639904882829 5.9 GB
EGAF00005744152 1639905900143 6.0 GB
EGAF00005744153 1639906080050 5.7 GB
EGAF00005744154 1639902242393 5.7 GB
EGAF00005744155 1639903443462 5.4 GB
EGAF00005744156 1639904220711 5.4 GB
EGAF00005744157 1639905480190 5.6 GB
EGAF00005744158 1639902421409 5.6 GB
EGAF00005744159 1639903860519 3.4 GB
EGAF00005744160 1639905420454 3.6 GB
EGAF00005744161 1639906560246 5.5 GB
EGAF00005744162 1639904280601 5.4 GB
EGAF00005744163 1639906140165 5.2 GB
EGAF00005744164 1639903500540 5.2 GB
EGAF00005744165 1639901760695 3.0 GB
EGAF00005744166 1639905181088 3.1 GB
EGAF00005744167 1639902180202 5.3 GB
EGAF00005744168 1639906140165 5.2 GB
EGAF00005744169 1639902480454 2.0 GB
EGAF00005744170 1639902121838 2.1 GB
EGAF00005744171 1639902421409 2.2 GB
EGAF00005744172 1639902301753 2.2 GB
EGAF00005744173 1639904882829 8.7 GB
EGAF00005744174 1639905480190 9.1 GB
EGAF00005744175 1639904820484 5.2 GB
EGAF00005744176 1639904610664 5.2 GB
EGAF00005744177 1639902660258 2.4 GB
EGAF00005744178 1639903921403 2.5 GB
EGAF00005744179 1639905420454 2.2 GB
EGAF00005744180 1639902540471 2.2 GB
EGAF00005744181 1639904882829 6.0 GB
EGAF00005744182 1639905240423 5.7 GB
EGAF00005744183 1639906140165 5.3 GB
EGAF00005744184 1639904610664 5.2 GB
EGAF00005744185 1639905600310 6.1 GB
EGAF00005744186 1639904280601 5.8 GB
EGAF00005744187 1639902121838 5.3 GB
EGAF00005744188 1639904761197 5.3 GB
EGAF00005744189 1639904700541 5.5 GB
EGAF00005744190 1639905720348 5.5 GB
EGAF00005744191 1639902960391 2.5 GB
EGAF00005744192 1639904610664 2.5 GB
EGAF00005744193 1639903382461 5.7 GB
EGAF00005744194 1639906260023 5.8 GB
EGAF00005744195 1639902362338 5.4 GB
EGAF00005744196 1639903020917 5.4 GB
EGAF00005744197 1639905002126 3.0 GB
EGAF00005744198 1639904610664 3.1 GB
EGAF00005744199 1639905540225 5.7 GB
EGAF00005744200 1639904820484 5.8 GB
EGAF00005744201 1639904162978 2.3 GB
EGAF00005744202 1639902900493 2.3 GB
EGAF00005744203 1639903266602 4.7 GB
EGAF00005744204 1639906200290 4.7 GB
EGAF00005744205 1639903382461 2.3 GB
EGAF00005744206 1639904162978 2.4 GB
EGAF00005744207 1639903020917 2.2 GB
EGAF00005744208 1639903981079 2.3 GB
EGAF00005744209 1639905900143 5.5 GB
EGAF00005744210 1639904400395 5.4 GB
EGAF00005744211 1639903921403 5.2 GB
EGAF00005744212 1639905002126 5.0 GB
EGAF00005744213 1639906140165 2.3 GB
EGAF00005744214 1639904340479 2.4 GB
EGAF00005744215 1639904820484 5.6 GB
EGAF00005744216 1639905600310 5.7 GB
EGAF00005744217 1639903322781 2.2 GB
EGAF00005744218 1639904042619 2.2 GB
EGAF00005744219 1639903443462 2.1 GB
EGAF00005744220 1639902840322 2.2 GB
EGAF00005744221 1639904610664 5.3 GB
EGAF00005744222 1639903921403 5.3 GB
EGAF00005744223 1639905122745 6.6 GB
EGAF00005744224 1639903740405 6.8 GB
EGAF00005744225 1639903500540 5.4 GB
EGAF00005744226 1639904946114 5.4 GB
EGAF00005744227 1639902840322 2.5 GB
EGAF00005744228 1639903627243 2.5 GB
EGAF00005744229 1639906380083 5.6 GB
EGAF00005744230 1639903020917 5.7 GB
EGAF00005744231 1639905480190 7.3 GB
EGAF00005744232 1639903322781 7.6 GB
EGAF00005744233 1639905600310 8.6 GB
EGAF00005744234 1639905840334 8.9 GB
EGAF00005744235 1639906140165 8.1 GB
EGAF00005744236 1639905300171 8.4 GB
EGAF00005744237 1639904280601 2.8 GB
EGAF00005744238 1639904400395 2.9 GB
EGAF00005744239 1639902421409 2.9 GB
EGAF00005744240 1639904610664 3.1 GB
EGAF00005744241 1639903500540 2.2 GB
EGAF00005744242 1639903266602 2.3 GB
EGAF00005744243 1639902301753 1.9 GB
EGAF00005744244 1639902780175 1.9 GB
EGAF00005744245 1639902840322 2.5 GB
EGAF00005744246 1639902780175 2.6 GB
EGAF00005744247 1639902600484 2.1 GB
EGAF00005744248 1639904946114 2.1 GB
EGAF00005744249 1639904101266 2.7 GB
EGAF00005744250 1639904610664 2.8 GB
EGAF00005744251 1639903740405 5.6 GB
EGAF00005744252 1639904610664 5.5 GB
EGAF00005744253 1639903322781 2.0 GB
EGAF00005744254 1639902362338 2.1 GB
EGAF00005744255 1639903740405 2.2 GB
EGAF00005744256 1639903382460 2.3 GB
EGAF00005744257 1639902720355 2.9 GB
EGAF00005744258 1639903681508 3.1 GB
EGAF00005744259 1639905061408 2.0 GB
EGAF00005744260 1639903322781 2.1 GB
EGAF00005744261 1639905360185 3.0 GB
EGAF00005744262 1639903020917 3.2 GB
EGAF00005744263 1639904610664 3.2 GB
EGAF00005744264 1639903860519 3.4 GB
EGAF00005744265 1639907040020 10.9 GB
EGAF00005744266 1639905900143 11.7 GB
EGAF00005744267 1639903081108 5.2 GB
EGAF00005744268 1639904761197 5.2 GB
EGAF00005744269 1639905420454 5.4 GB
EGAF00005744270 1639903443462 5.6 GB
EGAF00005744271 1639903860519 10.2 GB
EGAF00005744272 1639905420454 10.6 GB
EGAF00005744273 1639904882829 9.8 GB
EGAF00005744274 1639904946114 10.1 GB
EGAF00005744275 1639905061408 5.7 GB
EGAF00005744276 1639903800554 5.5 GB
EGAF00005744277 1639904820484 5.2 GB
EGAF00005744278 1639902660258 5.3 GB
EGAF00005744279 1639904640397 6.0 GB
EGAF00005744280 1639903322781 5.7 GB
EGAF00005744281 1639904162978 5.5 GB
EGAF00005744282 1639903322781 5.5 GB
EGAF00005744283 1639903443462 2.5 GB
EGAF00005744284 1639903921403 2.5 GB
EGAF00005744285 1639904820484 5.5 GB
EGAF00005744286 1639903266602 5.7 GB
EGAF00005744287 1639904610664 5.3 GB
EGAF00005744288 1639905480190 5.4 GB
EGAF00005744289 1639903020917 2.1 GB
EGAF00005744290 1639902000379 2.2 GB
EGAF00005744291 1639904042619 2.3 GB
EGAF00005744292 1639903443462 2.4 GB
EGAF00005744293 1639905360185 5.5 GB
EGAF00005744294 1639905540225 5.5 GB
EGAF00005744295 1639903266602 5.6 GB
EGAF00005744296 1639904220711 5.5 GB
EGAF00005744297 1639903144417 6.2 GB
EGAF00005744298 1639905002126 6.0 GB
EGAF00005744299 1639904042619 5.4 GB
EGAF00005744300 1639906020133 5.4 GB
EGAF00005744301 1639904610664 6.2 GB
EGAF00005744302 1639904761197 6.4 GB
EGAF00005744303 1639904340479 5.4 GB
EGAF00005744304 1639904162978 5.3 GB
EGAF00005744305 1639903800554 5.7 GB
EGAF00005744306 1639902480454 5.7 GB
EGAF00005744307 1639905900143 3.1 GB
EGAF00005744308 1639904042619 3.3 GB
EGAF00005744309 1639904220711 5.5 GB
EGAF00005744310 1639904162978 5.5 GB
EGAF00005744311 1639905600310 5.6 GB
EGAF00005744312 1639905122745 5.6 GB
EGAF00005744313 1639906740250 10.0 GB
EGAF00005744314 1639904042619 10.5 GB
EGAF00005744315 1639904101266 2.4 GB
EGAF00005744316 1639901700438 2.5 GB
EGAF00005744317 1639906380083 8.7 GB
EGAF00005744318 1639904946114 9.0 GB
EGAF00005744319 1639903740405 5.5 GB
EGAF00005744320 1639903020917 5.7 GB
EGAF00005744321 1639901700438 5.5 GB
EGAF00005744322 1639902421409 5.7 GB
EGAF00005744323 1639904640397 5.6 GB
EGAF00005744324 1639905181088 5.6 GB
EGAF00005744325 1639903382461 2.7 GB
EGAF00005744326 1639901760695 2.8 GB
EGAF00005744327 1639901640383 2.9 GB
EGAF00005744328 1639903500540 3.0 GB
EGAF00005744329 1639901760695 2.3 GB
EGAF00005744330 1639904820484 2.4 GB
EGAF00005744331 1639903144417 2.2 GB
EGAF00005744332 1639901700438 2.2 GB
EGAF00005744333 1639903740405 2.1 GB
EGAF00005744334 1639901821421 2.2 GB
EGAF00005744335 1639903382461 2.4 GB
EGAF00005744336 1639902180202 2.5 GB
EGAF00005744337 1639902060345 2.5 GB
EGAF00005744338 1639901281072 2.5 GB
EGAF00005744339 1639902900493 5.6 GB
EGAF00005744340 1639903800554 5.7 GB
EGAF00005744341 1639905540225 2.1 GB
EGAF00005744342 1639901640383 2.2 GB
EGAF00005744343 1639901940288 2.6 GB
EGAF00005744344 1639902242393 2.8 GB
EGAF00005744345 1639905240423 5.7 GB
EGAF00005744346 1639904946114 5.7 GB
EGAF00005744347 1639904700541 5.9 GB
EGAF00005744348 1639904610664 5.9 GB
EGAF00005744349 1639904610664 5.3 GB
EGAF00005744350 1639904340479 5.3 GB
EGAF00005744351 1639905480190 3.0 GB
EGAF00005744352 1639902660258 3.1 GB
EGAF00005744353 1639904400395 5.0 GB
EGAF00005744354 1639904882829 5.1 GB
EGAF00005744355 1639901580303 3.1 GB
EGAF00005744356 1639904101266 3.2 GB
EGAF00005744357 1639901940288 2.6 GB
EGAF00005744358 1639905122745 2.7 GB
EGAF00005744359 1639904042619 5.1 GB
EGAF00005744360 1639904882829 5.2 GB
EGAF00005744361 1639903981079 5.5 GB
EGAF00005744362 1639905002126 5.6 GB
EGAF00005744363 1639905540225 5.5 GB
EGAF00005744364 1639905122745 5.5 GB
EGAF00005744365 1639903921403 5.7 GB
EGAF00005744366 1639903322781 5.9 GB
EGAF00005744367 1639904400395 5.6 GB
EGAF00005744368 1639905780049 5.6 GB
EGAF00005744369 1639902000379 2.2 GB
EGAF00005744370 1639902362338 2.3 GB
EGAF00005744371 1639901640383 2.2 GB
EGAF00005744372 1639902362338 2.2 GB
EGAF00005744373 1639904700541 5.2 GB
EGAF00005744374 1639902121838 5.2 GB
EGAF00005744375 1639902000379 5.8 GB
EGAF00005744376 1639904761197 5.9 GB
EGAF00005744377 1639903681508 5.2 GB
EGAF00005744378 1639904400395 5.2 GB
EGAF00005744379 1639901760695 2.1 GB
EGAF00005744380 1639903921403 2.1 GB
EGAF00005744381 1639905660324 11.2 GB
EGAF00005744382 1639905600310 11.5 GB
EGAF00005744383 1639905840333 9.6 GB
EGAF00005744384 1639903740405 10.0 GB
EGAF00005744385 1639903560900 2.3 GB
EGAF00005744386 1639903860519 2.4 GB
EGAF00005744387 1639904162978 5.4 GB
EGAF00005744388 1639904946114 5.4 GB
EGAF00005744389 1639905360185 5.3 GB
EGAF00005744390 1639903020917 5.4 GB
EGAF00005744391 1639903500540 2.2 GB
EGAF00005744392 1639903681508 2.3 GB
EGAF00005744393 1639901940288 2.5 GB
EGAF00005744394 1639901881684 2.6 GB
EGAF00005744395 1639902600484 2.4 GB
EGAF00005744396 1639903266602 2.4 GB
EGAF00005744397 1639904610664 2.5 GB
EGAF00005744398 1639901580303 2.6 GB
EGAF00005744399 1639903627243 6.7 GB
EGAF00005744400 1639902900493 6.9 GB
EGAF00005744401 1639901640383 5.6 GB
EGAF00005744402 1639905600310 5.6 GB
EGAF00005744403 1639904280601 5.7 GB
EGAF00005744404 1639906080050 5.7 GB
EGAF00005744405 1639901640383 3.1 GB
EGAF00005744406 1639903500540 3.3 GB
EGAF00005744407 1639904820484 6.9 GB
EGAF00005744408 1639904700541 7.1 GB
EGAF00005744409 1639904700540 6.8 GB
EGAF00005744410 1639905540225 7.0 GB
EGAF00005744411 1639903266602 2.2 GB
EGAF00005744412 1639901700438 2.2 GB
EGAF00005744413 1639906020133 9.2 GB
EGAF00005744414 1639906620016 9.9 GB
EGAF00005744415 1639905300171 5.6 GB
EGAF00005744416 1639904280601 5.6 GB
EGAF00005744417 1639905600310 2.2 GB
EGAF00005744418 1639902720355 2.3 GB
EGAF00005744419 1639903800554 5.7 GB
EGAF00005744420 1639904700541 5.7 GB
EGAF00005744421 1639902060345 2.3 GB
EGAF00005744422 1639903266602 2.4 GB
EGAF00005744423 1639903201611 2.2 GB
EGAF00005744424 1639901520111 2.3 GB
EGAF00005744425 1639903627243 2.4 GB
EGAF00005744426 1639902000379 2.4 GB
EGAF00005744427 1639906560246 8.5 GB
EGAF00005744428 1639906380083 8.8 GB
EGAF00005744429 1639905240423 9.2 GB
EGAF00005744430 1639905181088 9.6 GB
EGAF00005744431 1639904700541 5.5 GB
EGAF00005744432 1639905122745 5.5 GB
EGAF00005744433 1639905181088 5.6 GB
EGAF00005744434 1639906020133 5.7 GB
EGAF00005744435 1639903800554 2.5 GB
EGAF00005744436 1639902900493 2.6 GB
EGAF00005744437 1639902600484 5.6 GB
EGAF00005744438 1639906140165 5.5 GB
EGAF00005744439 1639901881684 2.4 GB
EGAF00005744440 1639902301753 2.6 GB
322 Files (1.5 TB)