Multi-region sequencing of RCC with VTT and metastasis using WES and RNAseq
This dataset contains multi-region sequencing of 16 RCC patients with venous tumor thrombus (VTT), 11 of which were either metastatic on diagnosis or recurred with metastasis. Whole exome sequencing is available for 94 samples across all 16 patients, including 1 matched normal sample per patient, 2-3 primary tumor samples per patient, 1-2 VTT samples per patient, and 0-3 metastasis samples per patient (metastatic lesions were only sampled for 8 of the 11 metastatic patients). RNAseq, generated by exome capture, is available for 67 samples across 12 patients, including 0-1 matched normal samples per patient, 3 primary tumor samples per patient, 0-1 VTT samples per patient, and 0-3 metastasis samples per patient (RNAseq was only available for 4 of the 8 patients from whom metastatic lesions were sampled).
- 94 samples
- DAC: EGAC00001002463
- Technology: Illumina HiSeq 2500
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001005897 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00005744119 | fastq.gz | 3.0 GB | ||
| EGAF00005744120 | fastq.gz | 3.1 GB | ||
| EGAF00005744121 | fq.gz | 9.0 GB | ||
| EGAF00005744122 | fq.gz | 9.5 GB | ||
| EGAF00005744123 | fq.gz | 6.5 GB | ||
| EGAF00005744124 | fq.gz | 6.7 GB | ||
| EGAF00005744125 | fastq.gz | 2.1 GB | ||
| EGAF00005744126 | fastq.gz | 2.1 GB | ||
| EGAF00005744127 | fastq.gz | 2.4 GB | ||
| EGAF00005744128 | fastq.gz | 2.5 GB | ||
| EGAF00005744129 | fastq.gz | 5.2 GB | ||
| EGAF00005744130 | fastq.gz | 5.2 GB | ||
| EGAF00005744131 | fastq.gz | 2.2 GB | ||
| EGAF00005744132 | fastq.gz | 2.2 GB | ||
| EGAF00005744133 | fq.gz | 7.6 GB | ||
| EGAF00005744134 | fq.gz | 7.9 GB | ||
| EGAF00005744135 | fastq.gz | 2.4 GB | ||
| EGAF00005744136 | fastq.gz | 2.5 GB | ||
| EGAF00005744137 | fastq.gz | 2.2 GB | ||
| EGAF00005744138 | fastq.gz | 2.2 GB | ||
| EGAF00005744139 | fastq.gz | 2.2 GB | ||
| EGAF00005744140 | fastq.gz | 2.2 GB | ||
| EGAF00005744141 | fastq.gz | 2.7 GB | ||
| EGAF00005744142 | fastq.gz | 2.7 GB | ||
| EGAF00005744143 | fastq.gz | 3.0 GB | ||
| EGAF00005744144 | fastq.gz | 3.1 GB | ||
| EGAF00005744145 | fq.gz | 10.5 GB | ||
| EGAF00005744146 | fq.gz | 11.0 GB | ||
| EGAF00005744147 | fastq.gz | 2.8 GB | ||
| EGAF00005744148 | fastq.gz | 2.9 GB | ||
| EGAF00005744149 | fastq.gz | 5.4 GB | ||
| EGAF00005744150 | fastq.gz | 5.4 GB | ||
| EGAF00005744151 | fastq.gz | 5.9 GB | ||
| EGAF00005744152 | fastq.gz | 6.0 GB | ||
| EGAF00005744153 | fastq.gz | 5.7 GB | ||
| EGAF00005744154 | fastq.gz | 5.7 GB | ||
| EGAF00005744155 | fastq.gz | 5.4 GB | ||
| EGAF00005744156 | fastq.gz | 5.4 GB | ||
| EGAF00005744157 | fastq.gz | 5.6 GB | ||
| EGAF00005744158 | fastq.gz | 5.6 GB | ||
| EGAF00005744159 | fastq.gz | 3.4 GB | ||
| EGAF00005744160 | fastq.gz | 3.6 GB | ||
| EGAF00005744161 | fastq.gz | 5.5 GB | ||
| EGAF00005744162 | fastq.gz | 5.4 GB | ||
| EGAF00005744163 | fastq.gz | 5.2 GB | ||
| EGAF00005744164 | fastq.gz | 5.2 GB | ||
| EGAF00005744165 | fastq.gz | 3.0 GB | ||
| EGAF00005744166 | fastq.gz | 3.1 GB | ||
| EGAF00005744167 | fastq.gz | 5.3 GB | ||
| EGAF00005744168 | fastq.gz | 5.2 GB | ||
| EGAF00005744169 | fastq.gz | 2.0 GB | ||
| EGAF00005744170 | fastq.gz | 2.1 GB | ||
| EGAF00005744171 | fastq.gz | 2.2 GB | ||
| EGAF00005744172 | fastq.gz | 2.2 GB | ||
| EGAF00005744173 | fq.gz | 8.7 GB | ||
| EGAF00005744174 | fq.gz | 9.1 GB | ||
| EGAF00005744175 | fastq.gz | 5.2 GB | ||
| EGAF00005744176 | fastq.gz | 5.2 GB | ||
| EGAF00005744177 | fastq.gz | 2.4 GB | ||
| EGAF00005744178 | fastq.gz | 2.5 GB | ||
| EGAF00005744179 | fastq.gz | 2.2 GB | ||
| EGAF00005744180 | fastq.gz | 2.2 GB | ||
| EGAF00005744181 | fastq.gz | 6.0 GB | ||
| EGAF00005744182 | fastq.gz | 5.7 GB | ||
| EGAF00005744183 | fastq.gz | 5.3 GB | ||
| EGAF00005744184 | fastq.gz | 5.2 GB | ||
| EGAF00005744185 | fastq.gz | 6.1 GB | ||
| EGAF00005744186 | fastq.gz | 5.8 GB | ||
| EGAF00005744187 | fastq.gz | 5.3 GB | ||
| EGAF00005744188 | fastq.gz | 5.3 GB | ||
| EGAF00005744189 | fastq.gz | 5.5 GB | ||
| EGAF00005744190 | fastq.gz | 5.5 GB | ||
| EGAF00005744191 | fastq.gz | 2.5 GB | ||
| EGAF00005744192 | fastq.gz | 2.5 GB | ||
| EGAF00005744193 | fastq.gz | 5.7 GB | ||
| EGAF00005744194 | fastq.gz | 5.8 GB | ||
| EGAF00005744195 | fastq.gz | 5.4 GB | ||
| EGAF00005744196 | fastq.gz | 5.4 GB | ||
| EGAF00005744197 | fastq.gz | 3.0 GB | ||
| EGAF00005744198 | fastq.gz | 3.1 GB | ||
| EGAF00005744199 | fastq.gz | 5.7 GB | ||
| EGAF00005744200 | fastq.gz | 5.8 GB | ||
| EGAF00005744201 | fastq.gz | 2.3 GB | ||
| EGAF00005744202 | fastq.gz | 2.3 GB | ||
| EGAF00005744203 | fastq.gz | 4.7 GB | ||
| EGAF00005744204 | fastq.gz | 4.7 GB | ||
| EGAF00005744205 | fastq.gz | 2.3 GB | ||
| EGAF00005744206 | fastq.gz | 2.4 GB | ||
| EGAF00005744207 | fastq.gz | 2.2 GB | ||
| EGAF00005744208 | fastq.gz | 2.3 GB | ||
| EGAF00005744209 | fastq.gz | 5.5 GB | ||
| EGAF00005744210 | fastq.gz | 5.4 GB | ||
| EGAF00005744211 | fastq.gz | 5.2 GB | ||
| EGAF00005744212 | fastq.gz | 5.0 GB | ||
| EGAF00005744213 | fastq.gz | 2.3 GB | ||
| EGAF00005744214 | fastq.gz | 2.4 GB | ||
| EGAF00005744215 | fastq.gz | 5.6 GB | ||
| EGAF00005744216 | fastq.gz | 5.7 GB | ||
| EGAF00005744217 | fastq.gz | 2.2 GB | ||
| EGAF00005744218 | fastq.gz | 2.2 GB | ||
| EGAF00005744219 | fq.gz | 2.1 GB | ||
| EGAF00005744220 | fq.gz | 2.2 GB | ||
| EGAF00005744221 | fastq.gz | 5.3 GB | ||
| EGAF00005744222 | fastq.gz | 5.3 GB | ||
| EGAF00005744223 | fq.gz | 6.6 GB | ||
| EGAF00005744224 | fq.gz | 6.8 GB | ||
| EGAF00005744225 | fastq.gz | 5.4 GB | ||
| EGAF00005744226 | fastq.gz | 5.4 GB | ||
| EGAF00005744227 | fastq.gz | 2.5 GB | ||
| EGAF00005744228 | fastq.gz | 2.5 GB | ||
| EGAF00005744229 | fastq.gz | 5.6 GB | ||
| EGAF00005744230 | fastq.gz | 5.7 GB | ||
| EGAF00005744231 | fq.gz | 7.3 GB | ||
| EGAF00005744232 | fq.gz | 7.6 GB | ||
| EGAF00005744233 | fq.gz | 8.6 GB | ||
| EGAF00005744234 | fq.gz | 8.9 GB | ||
| EGAF00005744235 | fq.gz | 8.1 GB | ||
| EGAF00005744236 | fq.gz | 8.4 GB | ||
| EGAF00005744237 | fastq.gz | 2.8 GB | ||
| EGAF00005744238 | fastq.gz | 2.9 GB | ||
| EGAF00005744239 | fastq.gz | 2.9 GB | ||
| EGAF00005744240 | fastq.gz | 3.1 GB | ||
| EGAF00005744241 | fastq.gz | 2.2 GB | ||
| EGAF00005744242 | fastq.gz | 2.3 GB | ||
| EGAF00005744243 | fastq.gz | 1.9 GB | ||
| EGAF00005744244 | fastq.gz | 1.9 GB | ||
| EGAF00005744245 | fastq.gz | 2.5 GB | ||
| EGAF00005744246 | fastq.gz | 2.6 GB | ||
| EGAF00005744247 | fastq.gz | 2.1 GB | ||
| EGAF00005744248 | fastq.gz | 2.1 GB | ||
| EGAF00005744249 | fastq.gz | 2.7 GB | ||
| EGAF00005744250 | fastq.gz | 2.8 GB | ||
| EGAF00005744251 | fastq.gz | 5.6 GB | ||
| EGAF00005744252 | fastq.gz | 5.5 GB | ||
| EGAF00005744253 | fastq.gz | 2.0 GB | ||
| EGAF00005744254 | fastq.gz | 2.1 GB | ||
| EGAF00005744255 | fastq.gz | 2.2 GB | ||
| EGAF00005744256 | fastq.gz | 2.3 GB | ||
| EGAF00005744257 | fastq.gz | 2.9 GB | ||
| EGAF00005744258 | fastq.gz | 3.1 GB | ||
| EGAF00005744259 | fastq.gz | 2.0 GB | ||
| EGAF00005744260 | fastq.gz | 2.1 GB | ||
| EGAF00005744261 | fastq.gz | 3.0 GB | ||
| EGAF00005744262 | fastq.gz | 3.2 GB | ||
| EGAF00005744263 | fastq.gz | 3.2 GB | ||
| EGAF00005744264 | fastq.gz | 3.4 GB | ||
| EGAF00005744265 | fq.gz | 10.9 GB | ||
| EGAF00005744266 | fq.gz | 11.7 GB | ||
| EGAF00005744267 | fastq.gz | 5.2 GB | ||
| EGAF00005744268 | fastq.gz | 5.2 GB | ||
| EGAF00005744269 | fastq.gz | 5.4 GB | ||
| EGAF00005744270 | fastq.gz | 5.6 GB | ||
| EGAF00005744271 | fq.gz | 10.2 GB | ||
| EGAF00005744272 | fq.gz | 10.6 GB | ||
| EGAF00005744273 | fq.gz | 9.8 GB | ||
| EGAF00005744274 | fq.gz | 10.1 GB | ||
| EGAF00005744275 | fastq.gz | 5.7 GB | ||
| EGAF00005744276 | fastq.gz | 5.5 GB | ||
| EGAF00005744277 | fastq.gz | 5.2 GB | ||
| EGAF00005744278 | fastq.gz | 5.3 GB | ||
| EGAF00005744279 | fastq.gz | 6.0 GB | ||
| EGAF00005744280 | fastq.gz | 5.7 GB | ||
| EGAF00005744281 | fastq.gz | 5.5 GB | ||
| EGAF00005744282 | fastq.gz | 5.5 GB | ||
| EGAF00005744283 | fastq.gz | 2.5 GB | ||
| EGAF00005744284 | fastq.gz | 2.5 GB | ||
| EGAF00005744285 | fastq.gz | 5.5 GB | ||
| EGAF00005744286 | fastq.gz | 5.7 GB | ||
| EGAF00005744287 | fastq.gz | 5.3 GB | ||
| EGAF00005744288 | fastq.gz | 5.4 GB | ||
| EGAF00005744289 | fastq.gz | 2.1 GB | ||
| EGAF00005744290 | fastq.gz | 2.2 GB | ||
| EGAF00005744291 | fastq.gz | 2.3 GB | ||
| EGAF00005744292 | fastq.gz | 2.4 GB | ||
| EGAF00005744293 | fastq.gz | 5.5 GB | ||
| EGAF00005744294 | fastq.gz | 5.5 GB | ||
| EGAF00005744295 | fastq.gz | 5.6 GB | ||
| EGAF00005744296 | fastq.gz | 5.5 GB | ||
| EGAF00005744297 | fastq.gz | 6.2 GB | ||
| EGAF00005744298 | fastq.gz | 6.0 GB | ||
| EGAF00005744299 | fastq.gz | 5.4 GB | ||
| EGAF00005744300 | fastq.gz | 5.4 GB | ||
| EGAF00005744301 | fastq.gz | 6.2 GB | ||
| EGAF00005744302 | fastq.gz | 6.4 GB | ||
| EGAF00005744303 | fastq.gz | 5.4 GB | ||
| EGAF00005744304 | fastq.gz | 5.3 GB | ||
| EGAF00005744305 | fastq.gz | 5.7 GB | ||
| EGAF00005744306 | fastq.gz | 5.7 GB | ||
| EGAF00005744307 | fastq.gz | 3.1 GB | ||
| EGAF00005744308 | fastq.gz | 3.3 GB | ||
| EGAF00005744309 | fastq.gz | 5.5 GB | ||
| EGAF00005744310 | fastq.gz | 5.5 GB | ||
| EGAF00005744311 | fastq.gz | 5.6 GB | ||
| EGAF00005744312 | fastq.gz | 5.6 GB | ||
| EGAF00005744313 | fq.gz | 10.0 GB | ||
| EGAF00005744314 | fq.gz | 10.5 GB | ||
| EGAF00005744315 | fastq.gz | 2.4 GB | ||
| EGAF00005744316 | fastq.gz | 2.5 GB | ||
| EGAF00005744317 | fq.gz | 8.7 GB | ||
| EGAF00005744318 | fq.gz | 9.0 GB | ||
| EGAF00005744319 | fastq.gz | 5.5 GB | ||
| EGAF00005744320 | fastq.gz | 5.7 GB | ||
| EGAF00005744321 | fastq.gz | 5.5 GB | ||
| EGAF00005744322 | fastq.gz | 5.7 GB | ||
| EGAF00005744323 | fastq.gz | 5.6 GB | ||
| EGAF00005744324 | fastq.gz | 5.6 GB | ||
| EGAF00005744325 | fastq.gz | 2.7 GB | ||
| EGAF00005744326 | fastq.gz | 2.8 GB | ||
| EGAF00005744327 | fq.gz | 2.9 GB | ||
| EGAF00005744328 | fq.gz | 3.0 GB | ||
| EGAF00005744329 | fastq.gz | 2.3 GB | ||
| EGAF00005744330 | fastq.gz | 2.4 GB | ||
| EGAF00005744331 | fastq.gz | 2.2 GB | ||
| EGAF00005744332 | fastq.gz | 2.2 GB | ||
| EGAF00005744333 | fastq.gz | 2.1 GB | ||
| EGAF00005744334 | fastq.gz | 2.2 GB | ||
| EGAF00005744335 | fastq.gz | 2.4 GB | ||
| EGAF00005744336 | fastq.gz | 2.5 GB | ||
| EGAF00005744337 | fastq.gz | 2.5 GB | ||
| EGAF00005744338 | fastq.gz | 2.5 GB | ||
| EGAF00005744339 | fastq.gz | 5.6 GB | ||
| EGAF00005744340 | fastq.gz | 5.7 GB | ||
| EGAF00005744341 | fastq.gz | 2.1 GB | ||
| EGAF00005744342 | fastq.gz | 2.2 GB | ||
| EGAF00005744343 | fastq.gz | 2.6 GB | ||
| EGAF00005744344 | fastq.gz | 2.8 GB | ||
| EGAF00005744345 | fastq.gz | 5.7 GB | ||
| EGAF00005744346 | fastq.gz | 5.7 GB | ||
| EGAF00005744347 | fastq.gz | 5.9 GB | ||
| EGAF00005744348 | fastq.gz | 5.9 GB | ||
| EGAF00005744349 | fastq.gz | 5.3 GB | ||
| EGAF00005744350 | fastq.gz | 5.3 GB | ||
| EGAF00005744351 | fastq.gz | 3.0 GB | ||
| EGAF00005744352 | fastq.gz | 3.1 GB | ||
| EGAF00005744353 | fastq.gz | 5.0 GB | ||
| EGAF00005744354 | fastq.gz | 5.1 GB | ||
| EGAF00005744355 | fastq.gz | 3.1 GB | ||
| EGAF00005744356 | fastq.gz | 3.2 GB | ||
| EGAF00005744357 | fastq.gz | 2.6 GB | ||
| EGAF00005744358 | fastq.gz | 2.7 GB | ||
| EGAF00005744359 | fastq.gz | 5.1 GB | ||
| EGAF00005744360 | fastq.gz | 5.2 GB | ||
| EGAF00005744361 | fastq.gz | 5.5 GB | ||
| EGAF00005744362 | fastq.gz | 5.6 GB | ||
| EGAF00005744363 | fastq.gz | 5.5 GB | ||
| EGAF00005744364 | fastq.gz | 5.5 GB | ||
| EGAF00005744365 | fastq.gz | 5.7 GB | ||
| EGAF00005744366 | fastq.gz | 5.9 GB | ||
| EGAF00005744367 | fastq.gz | 5.6 GB | ||
| EGAF00005744368 | fastq.gz | 5.6 GB | ||
| EGAF00005744369 | fastq.gz | 2.2 GB | ||
| EGAF00005744370 | fastq.gz | 2.3 GB | ||
| EGAF00005744371 | fq.gz | 2.2 GB | ||
| EGAF00005744372 | fq.gz | 2.2 GB | ||
| EGAF00005744373 | fastq.gz | 5.2 GB | ||
| EGAF00005744374 | fastq.gz | 5.2 GB | ||
| EGAF00005744375 | fastq.gz | 5.8 GB | ||
| EGAF00005744376 | fastq.gz | 5.9 GB | ||
| EGAF00005744377 | fastq.gz | 5.2 GB | ||
| EGAF00005744378 | fastq.gz | 5.2 GB | ||
| EGAF00005744379 | fastq.gz | 2.1 GB | ||
| EGAF00005744380 | fastq.gz | 2.1 GB | ||
| EGAF00005744381 | fq.gz | 11.2 GB | ||
| EGAF00005744382 | fq.gz | 11.5 GB | ||
| EGAF00005744383 | fq.gz | 9.6 GB | ||
| EGAF00005744384 | fq.gz | 10.0 GB | ||
| EGAF00005744385 | fq.gz | 2.3 GB | ||
| EGAF00005744386 | fq.gz | 2.4 GB | ||
| EGAF00005744387 | fastq.gz | 5.4 GB | ||
| EGAF00005744388 | fastq.gz | 5.4 GB | ||
| EGAF00005744389 | fastq.gz | 5.3 GB | ||
| EGAF00005744390 | fastq.gz | 5.4 GB | ||
| EGAF00005744391 | fastq.gz | 2.2 GB | ||
| EGAF00005744392 | fastq.gz | 2.3 GB | ||
| EGAF00005744393 | fastq.gz | 2.5 GB | ||
| EGAF00005744394 | fastq.gz | 2.6 GB | ||
| EGAF00005744395 | fastq.gz | 2.4 GB | ||
| EGAF00005744396 | fastq.gz | 2.4 GB | ||
| EGAF00005744397 | fastq.gz | 2.5 GB | ||
| EGAF00005744398 | fastq.gz | 2.6 GB | ||
| EGAF00005744399 | fq.gz | 6.7 GB | ||
| EGAF00005744400 | fq.gz | 6.9 GB | ||
| EGAF00005744401 | fastq.gz | 5.6 GB | ||
| EGAF00005744402 | fastq.gz | 5.6 GB | ||
| EGAF00005744403 | fastq.gz | 5.7 GB | ||
| EGAF00005744404 | fastq.gz | 5.7 GB | ||
| EGAF00005744405 | fastq.gz | 3.1 GB | ||
| EGAF00005744406 | fastq.gz | 3.3 GB | ||
| EGAF00005744407 | fq.gz | 6.9 GB | ||
| EGAF00005744408 | fq.gz | 7.1 GB | ||
| EGAF00005744409 | fq.gz | 6.8 GB | ||
| EGAF00005744410 | fq.gz | 7.0 GB | ||
| EGAF00005744411 | fastq.gz | 2.2 GB | ||
| EGAF00005744412 | fastq.gz | 2.2 GB | ||
| EGAF00005744413 | fq.gz | 9.2 GB | ||
| EGAF00005744414 | fq.gz | 9.9 GB | ||
| EGAF00005744415 | fastq.gz | 5.6 GB | ||
| EGAF00005744416 | fastq.gz | 5.6 GB | ||
| EGAF00005744417 | fastq.gz | 2.2 GB | ||
| EGAF00005744418 | fastq.gz | 2.3 GB | ||
| EGAF00005744419 | fastq.gz | 5.7 GB | ||
| EGAF00005744420 | fastq.gz | 5.7 GB | ||
| EGAF00005744421 | fastq.gz | 2.3 GB | ||
| EGAF00005744422 | fastq.gz | 2.4 GB | ||
| EGAF00005744423 | fastq.gz | 2.2 GB | ||
| EGAF00005744424 | fastq.gz | 2.3 GB | ||
| EGAF00005744425 | fastq.gz | 2.4 GB | ||
| EGAF00005744426 | fastq.gz | 2.4 GB | ||
| EGAF00005744427 | fq.gz | 8.5 GB | ||
| EGAF00005744428 | fq.gz | 8.8 GB | ||
| EGAF00005744429 | fq.gz | 9.2 GB | ||
| EGAF00005744430 | fq.gz | 9.6 GB | ||
| EGAF00005744431 | fastq.gz | 5.5 GB | ||
| EGAF00005744432 | fastq.gz | 5.5 GB | ||
| EGAF00005744433 | fastq.gz | 5.6 GB | ||
| EGAF00005744434 | fastq.gz | 5.7 GB | ||
| EGAF00005744435 | fastq.gz | 2.5 GB | ||
| EGAF00005744436 | fastq.gz | 2.6 GB | ||
| EGAF00005744437 | fastq.gz | 5.6 GB | ||
| EGAF00005744438 | fastq.gz | 5.5 GB | ||
| EGAF00005744439 | fastq.gz | 2.4 GB | ||
| EGAF00005744440 | fastq.gz | 2.6 GB | ||
| 322 Files (1.5 TB) | ||||