Single-cell RNA-seq of patient-derived organoids across three generations
Single-cell RNA-seq of first-, second-, and third-generation patient-derived organoids. Obtained using the 10X Genomics single-cell 3' expression solution (v3 chemistry). First- and second-generation PDOs from one patient and first-, second-, and third-generation PDOs from three additional patients.
- 11 samples
- DAC: EGAC00000000011
- Technology: Illumina NovaSeq 6000
- RS DUO:0000012 (version: 2021-02-23)research specific restrictionsThis data use modifier indicates that use is limited to studies of a certain research type.
- RU DUO:0000014 (version: 2019-01-07)research use onlyThis data use limitation indicates that use is limited to research purposes (e.g., does not include its use in clinical care).
- TS DUO:0000025 (version: 2021-02-23)time limit on useThis data use modifier indicates that use is approved for a specific number of months.
- PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
BC Cancer, part of the Provincial Health Services Authority - Data Access Policy
Access to this data is controlled. There are a number of steps that a researcher must take to obtain access to this data, including execution of a Data Access Agreement between the institutions. The process is overseen by the Technology Development Office; please contact our general email address TDOadmin@phsa.ca. Please only click the "request data" button on the EGA website after a Data Access Agreement is fully executed.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001005227 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00005742153 | fastq.gz | 4.0 GB | ||
| EGAF00005742154 | fastq.gz | 3.4 GB | ||
| EGAF00005742155 | fastq.gz | 3.8 GB | ||
| EGAF00005742156 | fastq.gz | 3.4 GB | ||
| EGAF00005742157 | fastq.gz | 3.5 GB | ||
| EGAF00005742158 | fastq.gz | 3.1 GB | ||
| EGAF00005742159 | fastq.gz | 3.9 GB | ||
| EGAF00005742160 | fastq.gz | 3.4 GB | ||
| EGAF00005742161 | fastq.gz | 4.0 GB | ||
| EGAF00005742162 | fastq.gz | 3.5 GB | ||
| EGAF00005742163 | fastq.gz | 3.9 GB | ||
| EGAF00005742164 | fastq.gz | 3.4 GB | ||
| EGAF00005742165 | fastq.gz | 3.9 GB | ||
| EGAF00005742166 | fastq.gz | 3.3 GB | ||
| EGAF00005742167 | fastq.gz | 3.8 GB | ||
| EGAF00005742168 | fastq.gz | 3.2 GB | ||
| EGAF00005742169 | fastq.gz | 3.4 GB | ||
| EGAF00005742170 | fastq.gz | 2.9 GB | ||
| EGAF00005742171 | fastq.gz | 3.6 GB | ||
| EGAF00005742172 | fastq.gz | 3.2 GB | ||
| EGAF00005742173 | fastq.gz | 3.7 GB | ||
| EGAF00005742174 | fastq.gz | 3.3 GB | ||
| EGAF00005742175 | fastq.gz | 3.8 GB | ||
| EGAF00005742176 | fastq.gz | 3.3 GB | ||
| EGAF00005742177 | fastq.gz | 3.6 GB | ||
| EGAF00005742178 | fastq.gz | 3.2 GB | ||
| EGAF00005742179 | fastq.gz | 3.3 GB | ||
| EGAF00005742180 | fastq.gz | 3.0 GB | ||
| EGAF00005742181 | fastq.gz | 3.7 GB | ||
| EGAF00005742182 | fastq.gz | 3.2 GB | ||
| EGAF00005742183 | fastq.gz | 3.8 GB | ||
| EGAF00005742184 | fastq.gz | 3.4 GB | ||
| EGAF00005742185 | fastq.gz | 3.7 GB | ||
| EGAF00005742186 | fastq.gz | 3.3 GB | ||
| EGAF00005742187 | fastq.gz | 3.6 GB | ||
| EGAF00005742188 | fastq.gz | 3.1 GB | ||
| EGAF00005742189 | fastq.gz | 3.6 GB | ||
| EGAF00005742190 | fastq.gz | 3.0 GB | ||
| EGAF00005742191 | fastq.gz | 3.2 GB | ||
| EGAF00005742192 | fastq.gz | 2.8 GB | ||
| EGAF00005742193 | fastq.gz | 3.4 GB | ||
| EGAF00005742194 | fastq.gz | 3.1 GB | ||
| EGAF00005742195 | fastq.gz | 3.6 GB | ||
| EGAF00005742196 | fastq.gz | 3.2 GB | ||
| EGAF00005742197 | fastq.gz | 3.9 GB | ||
| EGAF00005742198 | fastq.gz | 3.4 GB | ||
| EGAF00005742199 | fastq.gz | 3.7 GB | ||
| EGAF00005742200 | fastq.gz | 3.4 GB | ||
| EGAF00005742201 | fastq.gz | 3.4 GB | ||
| EGAF00005742202 | fastq.gz | 3.1 GB | ||
| EGAF00005742203 | fastq.gz | 3.8 GB | ||
| EGAF00005742204 | fastq.gz | 3.3 GB | ||
| EGAF00005742205 | fastq.gz | 3.9 GB | ||
| EGAF00005742206 | fastq.gz | 3.5 GB | ||
| EGAF00005742207 | fastq.gz | 3.8 GB | ||
| EGAF00005742208 | fastq.gz | 3.4 GB | ||
| EGAF00005742209 | fastq.gz | 3.7 GB | ||
| EGAF00005742210 | fastq.gz | 3.2 GB | ||
| EGAF00005742211 | fastq.gz | 3.7 GB | ||
| EGAF00005742212 | fastq.gz | 3.1 GB | ||
| EGAF00005742213 | fastq.gz | 3.3 GB | ||
| EGAF00005742214 | fastq.gz | 2.9 GB | ||
| EGAF00005742215 | fastq.gz | 3.5 GB | ||
| EGAF00005742216 | fastq.gz | 3.2 GB | ||
| EGAF00005742217 | fastq.gz | 3.7 GB | ||
| EGAF00005742218 | fastq.gz | 3.3 GB | ||
| EGAF00005742219 | fastq.gz | 3.6 GB | ||
| EGAF00005742220 | fastq.gz | 3.1 GB | ||
| EGAF00005742221 | fastq.gz | 3.5 GB | ||
| EGAF00005742222 | fastq.gz | 3.1 GB | ||
| EGAF00005742223 | fastq.gz | 3.2 GB | ||
| EGAF00005742224 | fastq.gz | 2.9 GB | ||
| EGAF00005742225 | fastq.gz | 3.6 GB | ||
| EGAF00005742226 | fastq.gz | 3.1 GB | ||
| EGAF00005742227 | fastq.gz | 3.6 GB | ||
| EGAF00005742228 | fastq.gz | 3.2 GB | ||
| EGAF00005742229 | fastq.gz | 3.5 GB | ||
| EGAF00005742230 | fastq.gz | 3.1 GB | ||
| EGAF00005742231 | fastq.gz | 3.5 GB | ||
| EGAF00005742232 | fastq.gz | 3.0 GB | ||
| EGAF00005742233 | fastq.gz | 3.4 GB | ||
| EGAF00005742234 | fastq.gz | 2.9 GB | ||
| EGAF00005742235 | fastq.gz | 3.1 GB | ||
| EGAF00005742236 | fastq.gz | 2.7 GB | ||
| EGAF00005742237 | fastq.gz | 3.3 GB | ||
| EGAF00005742238 | fastq.gz | 2.9 GB | ||
| EGAF00005742239 | fastq.gz | 3.4 GB | ||
| EGAF00005742240 | fastq.gz | 3.0 GB | ||
| 88 Files (298.6 GB) | ||||