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Single-nuclei gene-expression analysis of pheochromocytoma and paraganglioma links tumor subtypes with tumor microenvironment

This dataset contains raw sequencing reads in FASTQ format from single-nuclei (30 samples) and bulk tissue (40 samples) transcriptome sequencing of pheochromocytoma and paraganglioma tissue specimens. Additionally, data from single-nuclei sequencing of two normal adrenal medulla specimens is included.

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University of Melbourne Cancer Research Centre (UMCCR) Data Access Committee (DAC) request form

University of Melbourne Cancer Research Centre (UMCCR) Data Access Committee (DAC) request form Email the completed form to: UMCCR-DAC@unimelb.edu.au The following form is to be used to submit an expression of interest to access data under the purview of the UMCCR-DAC and does not represent a binding data access agreement. REQUESTOR INFORMATION Graduate research student requestors must include their supervisor or a senior researcher as the Principal Investigator. Please use institutional email addresses only. Requestor Name: Job Title/Position: Department and Institution: Telephone: Email: Postal Address: Principal Investigator (if different to the Requestor) Name: Job Title/Position: Department and Institution: Telephone: Email: Postal Address: Authorised Institutional Representative Name: Job Title/Position: Institution: Telephone: Email: Postal Address: DATA REQUESTED Data description Include the EGA study and dataset accession number(s), other data identifier(s) and/or the name of the publication describing the data. Data type Is the requested data identifiable? (Whole-genome sequencing data is not considered identifiable.) ☐ Yes ☐ No PROJECT DETAILS Project description Describe the project in which the data will be used (500 words maximum). This should include specific details of the aims and what you plan to do with the data. Members of the project team requiring access to the data. Include the following information: Name Job title/position Institution Email Supervisor Feasibility Describe previous experience in this field of research and/or in similar projects by the requestor, principal investigator and other members of the project team. ETHICS APPROVAL Does this project require approval from a Human Research Ethics Committee (HREC) or comparable committee? ☐ Yes ☐ No If yes, name the HREC from which approval has been requested or obtained and attach relevant documentation (ethics application and/or approval documentation). If no, please explain why ethics approval is not required.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005732289 1638786660205 6.1 GB
EGAF00005732290 1638785221066 6.1 GB
EGAF00005732291 1638783001651 4.6 GB
EGAF00005732292 1638783240194 4.7 GB
EGAF00005732293 1638783060142 4.4 GB
EGAF00005732294 1638784680249 4.4 GB
EGAF00005732295 1638782400215 4.7 GB
EGAF00005732296 1638783001651 4.7 GB
EGAF00005732297 1638783240194 4.0 GB
EGAF00005732298 1638783120179 4.0 GB
EGAF00005732299 1638785640611 3.4 GB
EGAF00005732300 1638783662248 3.5 GB
EGAF00005732301 1638785221066 5.8 GB
EGAF00005732302 1638792960073 5.9 GB
EGAF00005732303 1638784740256 3.7 GB
EGAF00005732304 1638783840277 3.7 GB
EGAF00005732305 1638782940227 4.3 GB
EGAF00005732306 1638783360115 4.3 GB
EGAF00005732307 1638785640611 5.8 GB
EGAF00005732308 1638786360030 5.9 GB
EGAF00005732309 1638783540230 1.5 GB
EGAF00005732310 1638783960137 1.5 GB
EGAF00005732311 1638783600243 1.7 GB
EGAF00005732312 1638782160453 1.7 GB
EGAF00005732313 1638785760584 3.8 GB
EGAF00005732314 1638782220133 3.8 GB
EGAF00005732315 1638792900179 3.7 GB
EGAF00005732316 1638785460126 3.8 GB
EGAF00005732317 1638782460577 7.3 GB
EGAF00005732318 1638783302598 7.3 GB
EGAF00005732319 1638783720171 3.9 GB
EGAF00005732320 1638783720171 3.9 GB
EGAF00005732321 1638782940227 4.2 GB
EGAF00005732322 1638784380906 4.3 GB
EGAF00005732323 1638783001651 6.8 GB
EGAF00005732324 1638784680249 6.7 GB
EGAF00005732325 1638783120179 4.4 GB
EGAF00005732326 1638782880334 4.4 GB
EGAF00005732327 1638782761477 4.3 GB
EGAF00005732328 1638782880334 4.4 GB
EGAF00005732329 1638782640169 4.8 GB
EGAF00005732330 1638782640169 4.8 GB
EGAF00005732331 1638782640169 4.0 GB
EGAF00005732332 1638784024883 4.1 GB
EGAF00005732333 1638784680249 4.7 GB
EGAF00005732334 1638783720171 4.7 GB
EGAF00005732335 1638784081004 3.3 GB
EGAF00005732336 1638785640611 3.4 GB
EGAF00005732337 1638785760584 3.8 GB
EGAF00005732338 1638783960137 3.8 GB
EGAF00005732339 1638782880334 3.5 GB
EGAF00005732340 1638782761477 3.5 GB
EGAF00005732341 1638784024883 7.1 GB
EGAF00005732342 1638785340986 7.1 GB
EGAF00005732343 1638783240194 3.1 GB
EGAF00005732344 1638782700180 3.1 GB
EGAF00005732345 1638782820120 5.1 GB
EGAF00005732346 1638782880334 5.1 GB
EGAF00005732347 1638783060142 4.1 GB
EGAF00005732348 1638783060142 4.1 GB
EGAF00005732349 1638782640169 4.4 GB
EGAF00005732350 1638784980419 4.5 GB
EGAF00005732351 1638786001061 4.1 GB
EGAF00005732352 1638782220133 4.2 GB
EGAF00005732353 1638781860604 4.5 GB
EGAF00005732354 1638783540230 4.5 GB
EGAF00005732355 1638784500237 5.4 GB
EGAF00005732356 1638782640169 5.5 GB
EGAF00005732357 1638784740256 3.8 GB
EGAF00005732358 1638782880334 3.8 GB
EGAF00005732359 1638782880334 3.7 GB
EGAF00005732360 1638783662248 3.7 GB
EGAF00005732361 1638783600243 4.0 GB
EGAF00005732362 1638782280829 4.0 GB
EGAF00005732363 1638785821105 4.0 GB
EGAF00005732364 1638782880334 4.0 GB
EGAF00005732365 1638784909486 2.7 GB
EGAF00005732366 1638782940227 2.7 GB
EGAF00005732367 1638783302598 4.5 GB
EGAF00005732368 1638784081004 4.5 GB
EGAF00005732369 1638785760584 10.9 GB
EGAF00005732370 1638785280136 11.3 GB
EGAF00005732371 1638784260675 13.4 GB
EGAF00005732372 1638787920192 13.9 GB
EGAF00005732379 1638783780195 11.9 GB
EGAF00005732380 1638787920192 13.5 GB
EGAF00005732381 1638786600725 18.6 GB
EGAF00005732382 1638787080140 19.5 GB
EGAF00005732383 1638784140137 29.0 GB
EGAF00005732384 1638794640087 30.6 GB
EGAF00005732385 1638785460126 9.4 GB
EGAF00005732386 1638784320196 9.9 GB
EGAF00005732387 1638788493212 14.4 GB
EGAF00005732388 1638786300144 16.4 GB
EGAF00005732389 1638783480500 9.9 GB
EGAF00005732390 1638783600243 11.4 GB
EGAF00005732391 1638793140024 18.9 GB
EGAF00005732392 1638785580141 20.0 GB
EGAF00005732393 1638787920192 21.1 GB
EGAF00005732394 1638787620253 22.2 GB
EGAF00005732395 1638791940603 33.5 GB
EGAF00005732396 1638787140177 35.1 GB
EGAF00005732397 1638789540343 19.6 GB
EGAF00005732398 1638785880087 22.5 GB
EGAF00005732399 1638792120868 34.5 GB
EGAF00005732400 1638794100014 36.2 GB
EGAF00005732401 1638784380906 16.2 GB
EGAF00005732402 1638784500237 17.0 GB
EGAF00005732403 1638786600725 17.3 GB
EGAF00005732404 1638785280136 18.3 GB
EGAF00005732405 1638783840277 21.6 GB
EGAF00005732406 1638785821105 24.6 GB
EGAF00005732407 1638784024883 18.9 GB
EGAF00005732408 1638784500237 21.6 GB
EGAF00005732409 1638784024883 17.5 GB
EGAF00005732410 1638785340986 19.8 GB
EGAF00005732411 1638784680249 13.4 GB
EGAF00005732412 1638786660205 13.9 GB
EGAF00005732413 1638786600725 13.7 GB
EGAF00005732414 1638783662248 14.1 GB
EGAF00005732415 1638788493212 16.1 GB
EGAF00005732416 1638785100270 16.9 GB
EGAF00005732417 1638786060065 10.7 GB
EGAF00005732418 1638785400208 12.4 GB
EGAF00005732419 1638791160241 23.9 GB
EGAF00005732420 1638787620253 26.9 GB
EGAF00005732421 1638787920192 19.6 GB
EGAF00005732422 1638785340986 22.5 GB
EGAF00005732423 1638789901683 21.8 GB
EGAF00005732424 1638787020126 22.9 GB
EGAF00005732425 1638789060811 20.1 GB
EGAF00005732426 1638784909486 23.0 GB
EGAF00005732429 1638785340986 17.4 GB
EGAF00005732430 1638786960096 18.3 GB
EGAF00005732431 1638784081004 18.4 GB
EGAF00005732432 1638784680249 19.5 GB
136 Files (1.4 TB)