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Shallow whole genome sequencing and targeted sequencing of DLBCL patients treated in the HOVON84 trial

Shallow whole genome sequencing and targeted sequencing of DLBCL patients treated in the HOVON84 trial

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Data originating from patient samples

The Amsterdam UMC, tumor genome analysis core, allows access to published datasets upon written application and signature of a Data Access Agreement (DAA). In addition, applications to clinical datasets require approval by a Data Access Committee (DAC), who assess whether the proposed work is allowed given patient consent, as well as the scientific purpose. To aid this process we ask you to provide the information below. Requests will be prioritised according to novelty of the research question. Applications with insufficient detail on objectives, justification, and methods/planned analyses are unlikely to be accepted. 1.Reference number for the dataset 2.Full legal name and address of university/institution 3.Name(s) of the Principle Investigator who will use the data: 4.Name(s) and job title(s) of any other investigators who will use the data: 5.Please provide a minimum of one reference to a publication that can be found on PubMed and where the Principle Investigator is an author: 6.How will the data be stored and where will it be stored? 7.What is the proposed study title and what are the objectives and outcomes of the study in which the data will be used 8.Please provide a brief justification or rationale for the proposed study (max 250 words) 9.Please provide a brief description of planned data analyses (max 250 words): 10.Will the results arising from use of the data be used for the creation of products for sale or for any commercial purpose?

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003949 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005727358 bam 691.9 MB
EGAF00005727359 bam 741.8 MB
EGAF00005727360 bam 1.4 GB
EGAF00005727361 bam 1.3 GB
EGAF00005727362 bam 1.0 GB
EGAF00005727363 bam 546.3 MB
EGAF00005727364 bam 2.6 GB
EGAF00005727365 bam 1.5 GB
EGAF00005727366 bam 319.2 MB
EGAF00005727367 bam 761.9 MB
EGAF00005727368 bam 518.0 MB
EGAF00005727369 bam 232.2 MB
EGAF00005727370 bam 3.8 GB
EGAF00005727371 bam 461.2 MB
EGAF00005727372 bam 1.5 GB
EGAF00005727373 bam 833.5 MB
EGAF00005727374 bam 1.1 GB
EGAF00005727375 bam 2.9 GB
EGAF00005727376 bam 1.3 GB
EGAF00005727377 bam 1.3 GB
EGAF00005727378 bam 3.8 GB
EGAF00005727379 bam 1.5 GB
EGAF00005727380 bam 1.5 GB
EGAF00005727381 bam 423.9 MB
EGAF00005727382 bam 1.2 GB
EGAF00005727383 bam 1.1 GB
EGAF00005727384 bam 994.2 MB
EGAF00005727385 bam 488.7 MB
EGAF00005727386 bam 1.1 GB
EGAF00005727387 bam 4.6 GB
EGAF00005727388 bam 4.9 GB
EGAF00005727389 bam 856.4 MB
EGAF00005727390 bam 1.1 GB
EGAF00005727391 bam 1.0 GB
EGAF00005727392 bam 406.7 MB
EGAF00005727393 bam 2.2 GB
EGAF00005727394 bam 901.7 MB
EGAF00005727395 bam 394.4 MB
EGAF00005727396 bam 2.6 GB
EGAF00005727397 bam 2.2 GB
EGAF00005727398 bam 1.8 GB
EGAF00005727399 bam 447.0 MB
EGAF00005727400 bam 1.5 GB
EGAF00005727401 bam 1.0 GB
EGAF00005727402 bam 4.7 GB
EGAF00005727403 bam 2.4 GB
EGAF00005727404 bam 1.6 GB
EGAF00005727405 bam 986.0 MB
EGAF00005727406 bam 1.8 GB
EGAF00005727407 bam 389.7 MB
EGAF00005727408 bam 1.2 GB
EGAF00005727409 bam 779.7 MB
EGAF00005727410 bam 419.4 MB
EGAF00005727411 bam 1.8 GB
EGAF00005727412 bam 613.1 MB
EGAF00005727413 bam 4.5 GB
EGAF00005727414 bam 995.6 MB
EGAF00005727415 bam 1.7 GB
EGAF00005727416 bam 3.5 GB
EGAF00005727417 bam 2.0 GB
EGAF00005727418 bam 1.6 GB
EGAF00005727419 bam 888.6 MB
EGAF00005727420 bam 4.5 GB
EGAF00005727421 bam 995.6 MB
EGAF00005727422 bam 4.1 GB
EGAF00005727423 bam 2.3 GB
EGAF00005727424 bam 684.7 MB
EGAF00005727425 bam 1.7 GB
EGAF00005727426 bam 2.0 GB
EGAF00005727427 bam 1.4 GB
EGAF00005727428 bam 1.2 GB
EGAF00005727429 bam 1.3 GB
EGAF00005727430 bam 1.9 GB
EGAF00005727431 bam 3.3 GB
EGAF00005727432 bam 3.5 GB
EGAF00005727433 bam 491.3 MB
EGAF00005727434 bam 2.4 GB
EGAF00005727435 bam 1.1 GB
EGAF00005727436 bam 625.1 MB
EGAF00005727437 bam 1.5 GB
EGAF00005727438 bam 2.2 GB
EGAF00005727439 bam 1.6 GB
EGAF00005727440 bam 916.9 MB
EGAF00005727441 bam 2.0 GB
EGAF00005727442 bam 1.5 GB
EGAF00005727443 bam 1.3 GB
EGAF00005727444 bam 2.0 GB
EGAF00005727445 bam 3.1 GB
EGAF00005727446 bam 1.1 GB
EGAF00005727447 bam 3.5 GB
EGAF00005727448 bam 2.8 GB
EGAF00005727449 bam 667.1 MB
EGAF00005727450 bam 1.4 GB
EGAF00005727451 bam 1.7 GB
EGAF00005727452 bam 892.4 MB
EGAF00005727453 bam 1.6 GB
EGAF00005727454 bam 2.8 GB
EGAF00005727455 bam 1.3 GB
EGAF00005727456 bam 965.0 MB
EGAF00005727457 bam 937.0 MB
EGAF00005727458 bam 3.3 GB
EGAF00005727459 bam 895.6 MB
EGAF00005727460 bam 1.0 GB
EGAF00005727461 bam 1.1 GB
EGAF00005727462 bam 1.9 GB
EGAF00005727463 bam 476.5 MB
EGAF00005727464 bam 1.5 GB
EGAF00005727465 bam 1.5 GB
EGAF00005727466 bam 1.3 GB
EGAF00005727467 bam 2.9 GB
EGAF00005727468 bam 1.9 GB
EGAF00005727469 bam 1.4 GB
EGAF00005727470 bam 461.9 MB
EGAF00005727471 bam 2.6 GB
EGAF00005727472 bam 2.2 GB
EGAF00005727473 bam 1.8 GB
EGAF00005727474 bam 1.6 GB
EGAF00005727475 bam 1.7 GB
EGAF00005727476 bam 3.7 GB
EGAF00005727477 bam 1.7 GB
EGAF00005727478 bam 3.1 GB
EGAF00005727479 bam 2.3 GB
EGAF00005727480 bam 2.1 GB
EGAF00005727481 bam 1.2 GB
EGAF00005727482 bam 2.4 GB
EGAF00005727483 bam 2.8 GB
EGAF00005727484 bam 671.5 MB
EGAF00005727485 bam 2.5 GB
EGAF00005727486 bam 928.1 MB
EGAF00005727487 bam 2.2 GB
EGAF00005727488 bam 2.3 GB
EGAF00005727489 bam 1.5 GB
EGAF00005727490 bam 1.3 GB
EGAF00005727491 bam 1.3 GB
EGAF00005727492 bam 689.6 MB
EGAF00005727493 bam 581.3 MB
EGAF00005727494 bam 699.4 MB
EGAF00005727495 bam 1.7 GB
EGAF00005727496 bam 3.3 GB
EGAF00005727497 bam 1.7 GB
EGAF00005727498 bam 2.3 GB
EGAF00005727499 bam 1.9 GB
EGAF00005727500 bam 763.7 MB
EGAF00005727501 bam 697.8 MB
EGAF00005727502 bam 2.0 GB
EGAF00005727503 bam 3.7 GB
EGAF00005727504 bam 1.1 GB
EGAF00005727505 bam 2.0 GB
EGAF00005727506 bam 1.0 GB
EGAF00005727507 bam 555.6 MB
EGAF00005727508 bam 1.1 GB
EGAF00005727509 bam 692.2 MB
EGAF00005727510 bam 1.5 GB
EGAF00005727511 bam 1.1 GB
EGAF00005727512 bam 1.1 GB
EGAF00005727513 bam 295.4 MB
EGAF00005727514 bam 1.4 GB
EGAF00005727515 bam 2.2 GB
EGAF00005727516 bam 300.5 MB
EGAF00005727517 bam 9.4 GB
EGAF00005727518 bam 1.8 GB
EGAF00005727519 bam 397.3 MB
EGAF00005727520 bam 328.6 MB
EGAF00005727521 bam 2.4 GB
EGAF00005727522 bam 658.2 MB
EGAF00005727523 bam 581.4 MB
EGAF00005727524 bam 959.1 MB
EGAF00005727525 bam 842.1 MB
EGAF00005727526 bam 549.2 MB
EGAF00005727527 bam 2.3 GB
EGAF00005727528 bam 3.5 GB
EGAF00005727529 bam 2.0 GB
EGAF00005727530 bam 2.0 GB
EGAF00005727531 bam 2.6 GB
EGAF00005727532 bam 1.7 GB
EGAF00005727533 bam 2.5 GB
EGAF00005727534 bam 3.5 GB
EGAF00005727535 bam 806.0 MB
EGAF00005727536 bam 1.8 GB
EGAF00005727537 bam 3.3 GB
EGAF00005727538 bam 2.1 GB
EGAF00005727539 bam 1.4 GB
EGAF00005727540 bam 610.2 MB
EGAF00005727541 bam 699.8 MB
EGAF00005727542 bam 2.7 GB
EGAF00005727543 bam 1.2 GB
EGAF00005727544 bam 519.2 MB
EGAF00005727545 bam 1.2 GB
EGAF00005727546 bam 819.0 MB
EGAF00005727547 bam 2.0 GB
EGAF00005727548 bam 3.8 GB
EGAF00005727549 bam 626.3 MB
EGAF00005727550 bam 940.2 MB
EGAF00005727551 bam 2.6 GB
EGAF00005727552 bam 816.3 MB
EGAF00005727553 bam 595.5 MB
EGAF00005727554 bam 3.1 GB
EGAF00005727555 bam 2.1 GB
EGAF00005727556 bam 943.3 MB
EGAF00005727557 bam 1.1 GB
EGAF00005727558 bam 1.5 GB
EGAF00005727559 bam 5.2 GB
EGAF00005727560 bam 1.1 GB
EGAF00005727561 bam 695.9 MB
EGAF00005727562 bam 626.1 MB
EGAF00005727563 bam 2.4 GB
EGAF00005727564 bam 262.9 MB
EGAF00005727565 bam 1.7 GB
EGAF00005727566 bam 4.9 GB
EGAF00005727567 bam 1.2 GB
EGAF00005727568 bam 647.6 MB
EGAF00005727569 bam 1.3 GB
EGAF00005727570 bam 378.7 MB
EGAF00005727571 bam 2.3 GB
EGAF00005727572 bam 2.7 GB
EGAF00005727573 bam 340.0 MB
EGAF00005727574 bam 252.8 MB
EGAF00005727575 bam 1.7 GB
EGAF00005727576 bam 1.4 GB
EGAF00005727577 bam 267.8 MB
EGAF00005727578 fastq.gz 442.5 MB
EGAF00005727579 fastq.gz 323.4 MB
EGAF00005727580 fastq.gz 734.1 MB
EGAF00005727581 fastq.gz 406.5 MB
EGAF00005727582 fastq.gz 589.6 MB
EGAF00005727583 fastq.gz 490.9 MB
EGAF00005727584 fastq.gz 714.9 MB
EGAF00005727585 fastq.gz 597.0 MB
EGAF00005727586 fastq.gz 321.4 MB
EGAF00005727587 fastq.gz 337.6 MB
EGAF00005727588 fastq.gz 456.9 MB
EGAF00005727589 fastq.gz 257.0 MB
EGAF00005727590 fastq.gz 569.0 MB
EGAF00005727591 fastq.gz 555.5 MB
EGAF00005727592 fastq.gz 602.1 MB
EGAF00005727593 fastq.gz 277.1 MB
EGAF00005727594 fastq.gz 536.8 MB
EGAF00005727595 fastq.gz 530.9 MB
EGAF00005727596 fastq.gz 555.2 MB
EGAF00005727597 fastq.gz 226.5 MB
EGAF00005727598 fastq.gz 584.7 MB
EGAF00005727599 fastq.gz 648.7 MB
EGAF00005727600 fastq.gz 673.1 MB
EGAF00005727601 fastq.gz 438.9 MB
EGAF00005727602 fastq.gz 273.6 MB
EGAF00005727603 fastq.gz 399.9 MB
EGAF00005727604 fastq.gz 446.7 MB
EGAF00005727605 fastq.gz 505.2 MB
EGAF00005727606 fastq.gz 463.7 MB
EGAF00005727607 fastq.gz 579.9 MB
EGAF00005727608 fastq.gz 537.9 MB
EGAF00005727609 fastq.gz 509.1 MB
EGAF00005727610 fastq.gz 560.0 MB
EGAF00005727611 fastq.gz 371.8 MB
EGAF00005727612 fastq.gz 408.7 MB
EGAF00005727613 fastq.gz 665.5 MB
EGAF00005727614 fastq.gz 560.6 MB
EGAF00005727615 fastq.gz 216.5 MB
EGAF00005727616 fastq.gz 467.9 MB
EGAF00005727617 fastq.gz 489.7 MB
EGAF00005727618 fastq.gz 553.8 MB
EGAF00005727619 fastq.gz 309.1 MB
EGAF00005727620 fastq.gz 395.3 MB
EGAF00005727621 fastq.gz 591.5 MB
EGAF00005727622 fastq.gz 342.4 MB
EGAF00005727623 fastq.gz 433.5 MB
EGAF00005727624 fastq.gz 695.8 MB
EGAF00005727625 fastq.gz 434.3 MB
EGAF00005727626 fastq.gz 805.6 MB
EGAF00005727627 fastq.gz 348.8 MB
EGAF00005727628 fastq.gz 591.2 MB
EGAF00005727629 fastq.gz 503.9 MB
EGAF00005727630 fastq.gz 417.7 MB
EGAF00005727631 fastq.gz 613.7 MB
EGAF00005727632 fastq.gz 221.9 MB
EGAF00005727633 fastq.gz 690.2 MB
EGAF00005727634 fastq.gz 480.6 MB
EGAF00005727635 fastq.gz 764.9 MB
EGAF00005727636 fastq.gz 1.1 GB
EGAF00005727637 fastq.gz 312.4 MB
EGAF00005727638 fastq.gz 416.6 MB
EGAF00005727639 fastq.gz 375.2 MB
EGAF00005727640 fastq.gz 186.4 MB
EGAF00005727641 fastq.gz 513.7 MB
EGAF00005727642 fastq.gz 254.0 MB
EGAF00005727643 fastq.gz 454.6 MB
EGAF00005727644 fastq.gz 725.2 MB
EGAF00005727645 fastq.gz 736.5 MB
EGAF00005727646 fastq.gz 378.6 MB
EGAF00005727647 fastq.gz 417.6 MB
EGAF00005727648 fastq.gz 702.6 MB
EGAF00005727649 fastq.gz 286.5 MB
EGAF00005727650 fastq.gz 932.7 MB
EGAF00005727651 fastq.gz 1.3 GB
EGAF00005727652 fastq.gz 581.5 MB
EGAF00005727653 fastq.gz 523.8 MB
EGAF00005727654 fastq.gz 523.8 MB
EGAF00005727655 fastq.gz 500.9 MB
EGAF00005727656 fastq.gz 387.7 MB
EGAF00005727657 fastq.gz 239.2 MB
EGAF00005727658 fastq.gz 1.1 GB
EGAF00005727659 fastq.gz 474.9 MB
EGAF00005727660 fastq.gz 523.3 MB
EGAF00005727661 fastq.gz 420.1 MB
EGAF00005727662 fastq.gz 763.1 MB
EGAF00005727663 fastq.gz 308.8 MB
EGAF00005727664 fastq.gz 958.8 MB
EGAF00005727665 fastq.gz 1.2 GB
EGAF00005727666 fastq.gz 370.0 MB
EGAF00005727667 fastq.gz 401.5 MB
EGAF00005727668 fastq.gz 419.7 MB
EGAF00005727669 fastq.gz 440.6 MB
EGAF00005727670 fastq.gz 323.9 MB
EGAF00005727671 fastq.gz 459.8 MB
EGAF00005727672 fastq.gz 462.9 MB
EGAF00005727673 fastq.gz 520.7 MB
EGAF00005727674 fastq.gz 235.0 MB
EGAF00005727675 fastq.gz 418.0 MB
EGAF00005727676 fastq.gz 470.7 MB
EGAF00005727677 fastq.gz 451.2 MB
EGAF00005727678 fastq.gz 180.0 MB
EGAF00005727679 fastq.gz 407.0 MB
EGAF00005727680 fastq.gz 844.8 MB
EGAF00005727681 fastq.gz 192.3 MB
EGAF00005727682 fastq.gz 269.4 MB
EGAF00005727683 fastq.gz 220.2 MB
EGAF00005727684 fastq.gz 368.3 MB
EGAF00005727685 fastq.gz 543.6 MB
EGAF00005727686 fastq.gz 592.7 MB
EGAF00005727687 fastq.gz 642.6 MB
EGAF00005727688 fastq.gz 739.0 MB
EGAF00005727689 fastq.gz 288.9 MB
EGAF00005727690 fastq.gz 420.9 MB
EGAF00005727691 fastq.gz 284.2 MB
EGAF00005727692 fastq.gz 374.4 MB
EGAF00005727693 fastq.gz 592.1 MB
EGAF00005727694 fastq.gz 216.6 MB
EGAF00005727695 fastq.gz 674.8 MB
EGAF00005727696 fastq.gz 643.6 MB
EGAF00005727697 fastq.gz 550.9 MB
EGAF00005727698 fastq.gz 249.5 MB
EGAF00005727699 fastq.gz 343.8 MB
EGAF00005727700 fastq.gz 223.5 MB
EGAF00005727701 fastq.gz 200.4 MB
EGAF00005727702 fastq.gz 226.7 MB
EGAF00005727703 fastq.gz 214.5 MB
EGAF00005727704 fastq.gz 230.8 MB
EGAF00005727705 fastq.gz 566.8 MB
EGAF00005727706 fastq.gz 248.0 MB
EGAF00005727707 fastq.gz 171.1 MB
EGAF00005727708 fastq.gz 215.4 MB
EGAF00005727709 fastq.gz 1.5 GB
EGAF00005727710 fastq.gz 314.2 MB
EGAF00005727711 fastq.gz 341.8 MB
EGAF00005727712 fastq.gz 310.5 MB
EGAF00005727713 fastq.gz 400.4 MB
EGAF00005727714 fastq.gz 352.2 MB
EGAF00005727715 fastq.gz 348.8 MB
EGAF00005727716 fastq.gz 890.4 MB
EGAF00005727717 fastq.gz 170.2 MB
EGAF00005727718 fastq.gz 135.2 MB
EGAF00005727719 fastq.gz 174.1 MB
EGAF00005727720 fastq.gz 451.9 MB
EGAF00005727721 fastq.gz 394.7 MB
EGAF00005727722 fastq.gz 446.5 MB
EGAF00005727723 fastq.gz 367.1 MB
EGAF00005727724 fastq.gz 459.8 MB
EGAF00005727725 fastq.gz 648.1 MB
EGAF00005727726 fastq.gz 482.5 MB
EGAF00005727727 fastq.gz 472.7 MB
EGAF00005727728 fastq.gz 524.1 MB
EGAF00005727729 fastq.gz 306.2 MB
EGAF00005727730 fastq.gz 456.0 MB
EGAF00005727731 fastq.gz 426.8 MB
EGAF00005727732 fastq.gz 334.4 MB
EGAF00005727733 fastq.gz 494.9 MB
EGAF00005727734 fastq.gz 416.4 MB
EGAF00005727735 fastq.gz 727.2 MB
EGAF00005727736 fastq.gz 111.2 MB
EGAF00005727737 fastq.gz 703.2 MB
EGAF00005727738 fastq.gz 590.9 MB
EGAF00005727739 fastq.gz 425.6 MB
EGAF00005727740 fastq.gz 329.9 MB
EGAF00005727741 fastq.gz 526.7 MB
EGAF00005727742 fastq.gz 812.8 MB
EGAF00005727743 fastq.gz 488.9 MB
EGAF00005727744 fastq.gz 834.0 MB
EGAF00005727745 fastq.gz 145.8 MB
EGAF00005727746 fastq.gz 236.2 MB
EGAF00005727747 fastq.gz 642.3 MB
EGAF00005727748 fastq.gz 834.8 MB
EGAF00005727749 fastq.gz 491.7 MB
EGAF00005727750 fastq.gz 535.4 MB
EGAF00005727751 fastq.gz 539.0 MB
EGAF00005727752 fastq.gz 599.1 MB
EGAF00005727753 fastq.gz 277.7 MB
EGAF00005727754 fastq.gz 572.5 MB
EGAF00005727755 fastq.gz 402.6 MB
EGAF00005727756 fastq.gz 229.0 MB
EGAF00005727757 fastq.gz 867.3 MB
EGAF00005727758 fastq.gz 692.0 MB
EGAF00005727759 fastq.gz 668.5 MB
EGAF00005727760 fastq.gz 1.4 GB
EGAF00005727761 fastq.gz 155.8 MB
EGAF00005727762 fastq.gz 739.7 MB
EGAF00005727763 fastq.gz 237.0 MB
EGAF00005727764 fastq.gz 274.4 MB
EGAF00005727765 fastq.gz 264.3 MB
EGAF00005727766 fastq.gz 223.1 MB
EGAF00005727767 fastq.gz 409.6 MB
EGAF00005727768 fastq.gz 389.0 MB
EGAF00005727769 fastq.gz 299.2 MB
EGAF00005727770 fastq.gz 438.7 MB
EGAF00005727771 fastq.gz 436.1 MB
EGAF00005727772 fastq.gz 303.3 MB
EGAF00005727773 fastq.gz 188.6 MB
EGAF00005727774 fastq.gz 837.4 MB
EGAF00005727775 fastq.gz 402.3 MB
EGAF00005727776 fastq.gz 464.3 MB
EGAF00005727777 fastq.gz 496.5 MB
EGAF00005727778 fastq.gz 507.4 MB
EGAF00005727779 fastq.gz 824.8 MB
EGAF00005727780 fastq.gz 549.5 MB
EGAF00005727781 fastq.gz 434.8 MB
EGAF00005727782 fastq.gz 313.8 MB
EGAF00005727783 fastq.gz 255.1 MB
EGAF00005727784 fastq.gz 460.1 MB
EGAF00005727785 fastq.gz 640.0 MB
EGAF00005727786 fastq.gz 1.7 GB
EGAF00005727787 fastq.gz 311.1 MB
EGAF00005727788 fastq.gz 343.7 MB
EGAF00005727789 fastq.gz 525.9 MB
EGAF00005727790 fastq.gz 124.6 MB
EGAF00005727791 fastq.gz 525.0 MB
EGAF00005727792 fastq.gz 620.7 MB
EGAF00005727793 fastq.gz 110.1 MB
EGAF00005727794 fastq.gz 675.3 MB
EGAF00005727795 fastq.gz 562.8 MB
EGAF00005727796 fastq.gz 657.3 MB
EGAF00005727797 fastq.gz 178.3 MB
440 Files (470.6 GB)